Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 Y_RNA.74-201ENST00000362911 99 ntBASIC0.11□□□□□ -2.39
MMP13P45452 RNU6-302P-201ENST00000365249 107 ntBASIC0.11□□□□□ -2.39
MMP13P45452 SNORD56B-201ENST00000384713 71 ntBASIC0.11□□□□□ -2.39
MMP13P45452 RNU6-900P-201ENST00000384498 102 ntBASIC0.1□□□□□ -2.39
MMP13P45452 MIR4432-201ENST00000581823 84 ntBASIC0.1□□□□□ -2.39
MMP13P45452 MIR4743-201ENST00000584576 69 ntBASIC0.1□□□□□ -2.39
MMP13P45452 MIR8087-201ENST00000612745 78 ntBASIC0.1□□□□□ -2.39
MMP13P45452 MIR6888-201ENST00000621977 67 ntBASIC0.1□□□□□ -2.39
MMP13P45452 AL391099.1-201ENST00000624635 187 ntBASIC0.1□□□□□ -2.39
MMP13P45452 MIR892B-201ENST00000401279 77 ntBASIC0.09□□□□□ -2.4
MMP13P45452 RNU7-159P-201ENST00000459284 62 ntBASIC0.09□□□□□ -2.4
MMP13P45452 RNA5SP470-201ENST00000516463 106 ntBASIC0.09□□□□□ -2.4
MMP13P45452 RNU6-122P-201ENST00000516818 107 ntBASIC0.09□□□□□ -2.4
MMP13P45452 RNU6-973P-201ENST00000364690 107 ntBASIC0.08□□□□□ -2.4
MMP13P45452 RNU6-246P-201ENST00000384702 107 ntBASIC0.08□□□□□ -2.4
MMP13P45452 MIR633-201ENST00000384821 98 ntBASIC0.08□□□□□ -2.4
MMP13P45452 AC096531.1-201ENST00000419107 107 ntBASIC0.08□□□□□ -2.4
MMP13P45452 MIR466-201ENST00000580653 84 ntBASIC0.08□□□□□ -2.4
MMP13P45452 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.07□□□□□ -2.4
MMP13P45452 MIR6718-201ENST00000616153 80 ntBASIC0.07□□□□□ -2.4
MMP13P45452 MIR6779-201ENST00000617283 64 ntBASIC0.07□□□□□ -2.4
MMP13P45452 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.07□□□□□ -2.4
MMP13P45452 RNU6-446P-201ENST00000362827 106 ntBASIC0.06□□□□□ -2.4
MMP13P45452 RNU6-1079P-201ENST00000362861 110 ntBASIC0.06□□□□□ -2.4
MMP13P45452 Y_RNA.109-201ENST00000363215 102 ntBASIC0.06□□□□□ -2.4
MMP13P45452 MIR4290-201ENST00000583807 95 ntBASIC0.06□□□□□ -2.4
MMP13P45452 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.06□□□□□ -2.4
MMP13P45452 SNORD116-16-201ENST00000384533 92 ntBASIC0.05□□□□□ -2.4
MMP13P45452 MIR527-201ENST00000385244 85 ntBASIC0.05□□□□□ -2.4
MMP13P45452 AL445584.3-201ENST00000617173 78 ntBASIC0.05□□□□□ -2.4
MMP13P45452 RNA5SP63-201ENST00000391225 112 ntBASIC0.04□□□□□ -2.4
MMP13P45452 AC114755.3-201ENST00000481111 251 ntBASIC0.04□□□□□ -2.4
MMP13P45452 RNA5SP330-201ENST00000517096 96 ntBASIC0.04□□□□□ -2.4
MMP13P45452 snoR1.1-201ENST00000628177 80 ntBASIC0.04□□□□□ -2.4
MMP13P45452 RNU6-940P-201ENST00000363433 104 ntBASIC0.03□□□□□ -2.4
MMP13P45452 RNU6-458P-201ENST00000384179 107 ntBASIC0.03□□□□□ -2.4
MMP13P45452 MIR1197-201ENST00000408818 88 ntBASIC0.03□□□□□ -2.4
MMP13P45452 MIR4280-201ENST00000582178 76 ntBASIC0.03□□□□□ -2.4
MMP13P45452 U6.58-201ENST00000613107 107 ntBASIC0.03□□□□□ -2.4
MMP13P45452 RNU6-1133P-201ENST00000410963 100 ntBASIC0.02□□□□□ -2.41
MMP13P45452 AC108676.2-201ENST00000605225 163 ntBASIC0.02□□□□□ -2.41
MMP13P45452 SNORD1B-201ENST00000363091 84 ntBASIC0.01□□□□□ -2.41
MMP13P45452 RNU6-829P-201ENST00000363700 112 ntBASIC0.01□□□□□ -2.41
MMP13P45452 MIR3938-201ENST00000582157 103 ntBASIC0.01□□□□□ -2.41
MMP13P45452 SNORD49B-201ENST00000365172 72 ntBASIC0□□□□□ -2.41
MMP13P45452 MIR4768-201ENST00000585270 74 ntBASIC0□□□□□ -2.41
MMP13P45452 AL590491.3-201ENST00000610731 82 ntBASIC0□□□□□ -2.41
MMP13P45452 RNA5SP457-201ENST00000363657 124 ntBASIC-0.01□□□□□ -2.41
MMP13P45452 RNU6-598P-201ENST00000364017 105 ntBASIC-0.01□□□□□ -2.41
MMP13P45452 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.01□□□□□ -2.41
MMP13P45452 SNORD113-4-201ENST00000364802 75 ntBASIC-0.01□□□□□ -2.41
MMP13P45452 AL445193.1-201ENST00000441183 141 ntBASIC-0.01□□□□□ -2.41
MMP13P45452 AC079150.2-201ENST00000443733 78 ntBASIC-0.01□□□□□ -2.41
MMP13P45452 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.02□□□□□ -2.41
MMP13P45452 RNU6-499P-201ENST00000365615 107 ntBASIC-0.02□□□□□ -2.41
MMP13P45452 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
MMP13P45452 MIR6854-201ENST00000614935 69 ntBASIC-0.02□□□□□ -2.41
MMP13P45452 U2.18-201ENST00000622185 84 ntBASIC-0.02□□□□□ -2.41
MMP13P45452 SNORD114-16-201ENST00000363044 70 ntBASIC-0.03□□□□□ -2.41
MMP13P45452 RNU6-46P-201ENST00000383860 107 ntBASIC-0.03□□□□□ -2.41
MMP13P45452 SNORD38.3-201ENST00000516599 73 ntBASIC-0.03□□□□□ -2.41
MMP13P45452 U7.5-201ENST00000517224 61 ntBASIC-0.03□□□□□ -2.41
MMP13P45452 MIR371B-201ENST00000638082 66 ntBASIC-0.03□□□□□ -2.41
MMP13P45452 RNU6-901P-201ENST00000384593 106 ntBASIC-0.04□□□□□ -2.42
MMP13P45452 RNU7-88P-201ENST00000458752 63 ntBASIC-0.04□□□□□ -2.42
MMP13P45452 RNU6-231P-201ENST00000517122 103 ntBASIC-0.04□□□□□ -2.42
MMP13P45452 SNORA62.4-201ENST00000365504 151 ntBASIC-0.05□□□□□ -2.42
MMP13P45452 MIR124-2-201ENST00000385081 109 ntBASIC-0.05□□□□□ -2.42
MMP13P45452 MIR5190-201ENST00000581537 80 ntBASIC-0.05□□□□□ -2.42
MMP13P45452 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
MMP13P45452 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.07□□□□□ -2.42
MMP13P45452 RNU6-172P-201ENST00000411000 93 ntBASIC-0.07□□□□□ -2.42
MMP13P45452 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.07□□□□□ -2.42
MMP13P45452 MIR6851-201ENST00000617060 67 ntBASIC-0.07□□□□□ -2.42
MMP13P45452 SNORD114-12-201ENST00000365400 75 ntBASIC-0.08□□□□□ -2.42
MMP13P45452 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
MMP13P45452 SNORA40.16-201ENST00000517238 121 ntBASIC-0.08□□□□□ -2.42
MMP13P45452 RNA5SP169-201ENST00000517268 117 ntBASIC-0.09□□□□□ -2.42
MMP13P45452 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.09□□□□□ -2.42
MMP13P45452 MIR2909-201ENST00000617113 69 ntBASIC-0.09□□□□□ -2.42
MMP13P45452 SNORD114-11-201ENST00000363738 75 ntBASIC-0.1□□□□□ -2.43
MMP13P45452 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.11□□□□□ -2.43
MMP13P45452 MIR579-201ENST00000385221 98 ntBASIC-0.11□□□□□ -2.43
MMP13P45452 SNORD116.2-201ENST00000391251 93 ntBASIC-0.11□□□□□ -2.43
MMP13P45452 SNORA18.1-201ENST00000363418 128 ntBASIC-0.12□□□□□ -2.43
MMP13P45452 RNU6-810P-201ENST00000364001 107 ntBASIC-0.12□□□□□ -2.43
MMP13P45452 RNA5SP66-201ENST00000517178 101 ntBASIC-0.12□□□□□ -2.43
MMP13P45452 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.12□□□□□ -2.43
MMP13P45452 RNU6-1312P-201ENST00000362425 108 ntBASIC-0.13□□□□□ -2.43
MMP13P45452 RNU6-696P-201ENST00000390834 107 ntBASIC-0.13□□□□□ -2.43
MMP13P45452 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.13□□□□□ -2.43
MMP13P45452 SNORD57-201ENST00000448188 72 ntBASIC-0.13□□□□□ -2.43
MMP13P45452 AC104692.1-201ENST00000472406 90 ntBASIC-0.13□□□□□ -2.43
MMP13P45452 MIR7110-201ENST00000612638 86 ntBASIC-0.13□□□□□ -2.43
MMP13P45452 RNA5SP257-201ENST00000363023 116 ntBASIC-0.14□□□□□ -2.43
MMP13P45452 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.14□□□□□ -2.43
MMP13P45452 SNORD4A-201ENST00000459174 72 ntBASIC-0.14□□□□□ -2.43
MMP13P45452 RNU7-151P-201ENST00000516930 53 ntBASIC-0.14□□□□□ -2.43
MMP13P45452 MIR4490-201ENST00000582647 84 ntBASIC-0.14□□□□□ -2.43
MMP13P45452 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.14□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 210 ms