Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 Y_RNA.698-201ENST00000516798 118 ntBASIC0.68□□□□□ -2.3
GPC1P35052 RNU6-419P-201ENST00000517030 63 ntBASIC0.68□□□□□ -2.3
GPC1P35052 U7.5-201ENST00000517224 61 ntBASIC0.68□□□□□ -2.3
GPC1P35052 MIR6514-201ENST00000622549 70 ntBASIC0.68□□□□□ -2.3
GPC1P35052 RNU6-815P-201ENST00000384080 113 ntBASIC0.67□□□□□ -2.3
GPC1P35052 MIR598-201ENST00000384868 97 ntBASIC0.67□□□□□ -2.3
GPC1P35052 RNU6-696P-201ENST00000390834 107 ntBASIC0.67□□□□□ -2.3
GPC1P35052 RNA5SP121-201ENST00000516537 101 ntBASIC0.67□□□□□ -2.3
GPC1P35052 RNU7-160P-201ENST00000516660 62 ntBASIC0.67□□□□□ -2.3
GPC1P35052 MIR4714-201ENST00000580728 77 ntBASIC0.67□□□□□ -2.3
GPC1P35052 MIR6835-201ENST00000621552 64 ntBASIC0.67□□□□□ -2.3
GPC1P35052 Y_RNA.69-201ENST00000362885 109 ntBASIC0.66□□□□□ -2.3
GPC1P35052 MIR548AA1-201ENST00000384971 97 ntBASIC0.66□□□□□ -2.3
GPC1P35052 MIR6888-201ENST00000621977 67 ntBASIC0.66□□□□□ -2.3
GPC1P35052 RNA5SP62-201ENST00000363457 110 ntBASIC0.65□□□□□ -2.31
GPC1P35052 RNU6-1206P-201ENST00000516339 103 ntBASIC0.65□□□□□ -2.31
GPC1P35052 RNA5SP480-201ENST00000516840 109 ntBASIC0.65□□□□□ -2.31
GPC1P35052 MIRLET7D-201ENST00000362263 87 ntBASIC0.64□□□□□ -2.31
GPC1P35052 MIR329-2-201ENST00000385029 84 ntBASIC0.64□□□□□ -2.31
GPC1P35052 SNORA62.4-201ENST00000365504 151 ntBASIC0.63□□□□□ -2.31
GPC1P35052 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
GPC1P35052 RNA5SP163-201ENST00000410304 99 ntBASIC0.62□□□□□ -2.31
GPC1P35052 RNU6-1267P-201ENST00000410747 107 ntBASIC0.62□□□□□ -2.31
GPC1P35052 MIR4464-201ENST00000580818 92 ntBASIC0.62□□□□□ -2.31
GPC1P35052 RNU6-924P-201ENST00000362926 108 ntBASIC0.61□□□□□ -2.31
GPC1P35052 RNU6-973P-201ENST00000364690 107 ntBASIC0.61□□□□□ -2.31
GPC1P35052 RNU6-455P-201ENST00000384681 107 ntBASIC0.61□□□□□ -2.31
GPC1P35052 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.61□□□□□ -2.31
GPC1P35052 AL445584.3-201ENST00000617173 78 ntBASIC0.61□□□□□ -2.31
GPC1P35052 RNA5SP325-201ENST00000363756 130 ntBASIC0.6□□□□□ -2.31
GPC1P35052 RNU7-55P-201ENST00000459426 62 ntBASIC0.6□□□□□ -2.31
GPC1P35052 RNU6-1174P-201ENST00000517278 101 ntBASIC0.6□□□□□ -2.31
GPC1P35052 RNU6-828P-201ENST00000364876 107 ntBASIC0.59□□□□□ -2.31
GPC1P35052 MIR548F3-201ENST00000408509 87 ntBASIC0.59□□□□□ -2.31
GPC1P35052 SNORD63.1-201ENST00000516178 80 ntBASIC0.59□□□□□ -2.31
GPC1P35052 RNU6-838P-201ENST00000363399 108 ntBASIC0.58□□□□□ -2.32
GPC1P35052 SNORD114-26-201ENST00000363543 72 ntBASIC0.58□□□□□ -2.32
GPC1P35052 RNU6-900P-201ENST00000384498 102 ntBASIC0.58□□□□□ -2.32
GPC1P35052 AC069113.3-201ENST00000521019 150 ntBASIC0.58□□□□□ -2.32
GPC1P35052 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
GPC1P35052 SNORD57-201ENST00000448188 72 ntBASIC0.57□□□□□ -2.32
GPC1P35052 CR383656.4-201ENST00000546909 122 ntBASIC0.57□□□□□ -2.32
GPC1P35052 MIR5704-201ENST00000584029 77 ntBASIC0.57□□□□□ -2.32
GPC1P35052 MIR6779-201ENST00000617283 64 ntBASIC0.57□□□□□ -2.32
GPC1P35052 RNU6-247P-201ENST00000362636 107 ntBASIC0.56□□□□□ -2.32
GPC1P35052 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
GPC1P35052 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
GPC1P35052 RNU6-901P-201ENST00000384593 106 ntBASIC0.55□□□□□ -2.32
GPC1P35052 MIR216A-201ENST00000385063 110 ntBASIC0.55□□□□□ -2.32
GPC1P35052 MIR6513-201ENST00000621188 64 ntBASIC0.55□□□□□ -2.32
GPC1P35052 MIR545-201ENST00000385085 106 ntBASIC0.54□□□□□ -2.32
GPC1P35052 MIR125B1-201ENST00000385236 88 ntBASIC0.54□□□□□ -2.32
GPC1P35052 AC096531.1-201ENST00000419107 107 ntBASIC0.54□□□□□ -2.32
GPC1P35052 Y_RNA.139-201ENST00000363464 102 ntBASIC0.53□□□□□ -2.32
GPC1P35052 RN7SL793P-201ENST00000583259 296 ntBASIC0.53□□□□□ -2.32
GPC1P35052 MIR593-201ENST00000384856 100 ntBASIC0.52□□□□□ -2.33
GPC1P35052 MIR936-201ENST00000401264 98 ntBASIC0.52□□□□□ -2.33
GPC1P35052 AL451105.1-201ENST00000450005 189 ntBASIC0.52□□□□□ -2.33
GPC1P35052 MIR6507-201ENST00000613630 70 ntBASIC0.52□□□□□ -2.33
GPC1P35052 MIR8068-201ENST00000618032 68 ntBASIC0.52□□□□□ -2.33
GPC1P35052 RNA5SP499-201ENST00000363982 119 ntBASIC0.51□□□□□ -2.33
GPC1P35052 MIR124-2-201ENST00000385081 109 ntBASIC0.51□□□□□ -2.33
GPC1P35052 RNU6-180P-201ENST00000516697 61 ntBASIC0.51□□□□□ -2.33
GPC1P35052 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
GPC1P35052 MIR548H2-201ENST00000408874 88 ntBASIC0.5□□□□□ -2.33
GPC1P35052 RNA5SP193-201ENST00000410353 107 ntBASIC0.5□□□□□ -2.33
GPC1P35052 Y_RNA.613-201ENST00000410726 97 ntBASIC0.5□□□□□ -2.33
GPC1P35052 MIR6854-201ENST00000614935 69 ntBASIC0.5□□□□□ -2.33
GPC1P35052 MIR148A-201ENST00000362215 68 ntBASIC0.49□□□□□ -2.33
GPC1P35052 RNA5SP347-201ENST00000362445 119 ntBASIC0.48□□□□□ -2.33
GPC1P35052 RNU6-974P-201ENST00000384099 108 ntBASIC0.48□□□□□ -2.33
GPC1P35052 MIR610-201ENST00000385139 96 ntBASIC0.48□□□□□ -2.33
GPC1P35052 MIR892B-201ENST00000401279 77 ntBASIC0.48□□□□□ -2.33
GPC1P35052 RNU6-1238P-201ENST00000517215 102 ntBASIC0.48□□□□□ -2.33
GPC1P35052 MIR4711-201ENST00000578274 70 ntBASIC0.48□□□□□ -2.33
GPC1P35052 MIR548Q-201ENST00000408404 100 ntBASIC0.47□□□□□ -2.33
GPC1P35052 SNORD63.2-201ENST00000516303 64 ntBASIC0.47□□□□□ -2.33
GPC1P35052 RNU6-732P-201ENST00000516033 103 ntBASIC0.46□□□□□ -2.34
GPC1P35052 MIR3170-201ENST00000582699 77 ntBASIC0.46□□□□□ -2.34
GPC1P35052 AC090625.1-201ENST00000357130 210 ntBASIC0.45□□□□□ -2.34
GPC1P35052 SNORD45.2-201ENST00000363552 72 ntBASIC0.45□□□□□ -2.34
GPC1P35052 RNU6-1327P-201ENST00000365302 105 ntBASIC0.45□□□□□ -2.34
GPC1P35052 RNU6-1111P-201ENST00000391118 107 ntBASIC0.45□□□□□ -2.34
GPC1P35052 AL445193.1-201ENST00000441183 141 ntBASIC0.45□□□□□ -2.34
GPC1P35052 MIR5087-201ENST00000635826 76 ntBASIC0.45□□□□□ -2.34
GPC1P35052 SNORD56B-201ENST00000384713 71 ntBASIC0.44□□□□□ -2.34
GPC1P35052 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
GPC1P35052 AC104408.1-201ENST00000605241 170 ntBASIC0.44□□□□□ -2.34
GPC1P35052 SNORD114-23-201ENST00000363536 72 ntBASIC0.43□□□□□ -2.34
GPC1P35052 AC244250.2-201ENST00000418731 148 ntBASIC0.43□□□□□ -2.34
GPC1P35052 MIR4315-1-201ENST00000636800 73 ntBASIC0.43□□□□□ -2.34
GPC1P35052 MIR4315-2-201ENST00000640925 73 ntBASIC0.43□□□□□ -2.34
GPC1P35052 MIR193B-201ENST00000384907 83 ntBASIC0.42□□□□□ -2.34
GPC1P35052 RNU7-159P-201ENST00000459284 62 ntBASIC0.42□□□□□ -2.34
GPC1P35052 MIR548AL-201ENST00000578416 97 ntBASIC0.42□□□□□ -2.34
GPC1P35052 MIR145-201ENST00000384967 88 ntBASIC0.41□□□□□ -2.34
GPC1P35052 MTRNR2L9-201ENST00000622562 75 ntBASIC0.4□□□□□ -2.35
GPC1P35052 AC010487.4-201ENST00000637027 61 ntBASIC0.4□□□□□ -2.35
GPC1P35052 MIR1273G-201ENST00000577677 100 ntBASIC0.39□□□□□ -2.35
GPC1P35052 AC114755.3-201ENST00000481111 251 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 301.8 ms