Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 MIR106A-201ENST00000384870 81 ntBASIC0.98□□□□□ -2.25
COL8A1P27658 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
COL8A1P27658 MIR876-201ENST00000401147 81 ntBASIC0.98□□□□□ -2.25
COL8A1P27658 SNORD63.2-201ENST00000516303 64 ntBASIC0.98□□□□□ -2.25
COL8A1P27658 RNA5SP476-201ENST00000516613 103 ntBASIC0.98□□□□□ -2.25
COL8A1P27658 AP000676.1-201ENST00000533307 52 ntBASIC0.98□□□□□ -2.25
COL8A1P27658 AC068338.1-201ENST00000565567 176 ntBASIC0.98□□□□□ -2.25
COL8A1P27658 SNORD71-201ENST00000411292 86 ntBASIC0.97□□□□□ -2.25
COL8A1P27658 MIR3973-201ENST00000579824 107 ntBASIC0.97□□□□□ -2.25
COL8A1P27658 MIR4464-201ENST00000580818 92 ntBASIC0.97□□□□□ -2.25
COL8A1P27658 MIR3170-201ENST00000582699 77 ntBASIC0.97□□□□□ -2.25
COL8A1P27658 MIR6888-201ENST00000621977 67 ntBASIC0.97□□□□□ -2.25
COL8A1P27658 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
COL8A1P27658 SNORA62.4-201ENST00000365504 151 ntBASIC0.96□□□□□ -2.26
COL8A1P27658 RNU6-530P-201ENST00000391180 107 ntBASIC0.96□□□□□ -2.26
COL8A1P27658 RNA5SP330-201ENST00000517096 96 ntBASIC0.96□□□□□ -2.26
COL8A1P27658 AC104408.1-201ENST00000605241 170 ntBASIC0.96□□□□□ -2.26
COL8A1P27658 AL445584.3-201ENST00000617173 78 ntBASIC0.96□□□□□ -2.26
COL8A1P27658 MIR6755-201ENST00000619993 66 ntBASIC0.96□□□□□ -2.26
COL8A1P27658 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.95□□□□□ -2.26
COL8A1P27658 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
COL8A1P27658 MIR518A1-201ENST00000385068 85 ntBASIC0.94□□□□□ -2.26
COL8A1P27658 MIR760-201ENST00000390220 80 ntBASIC0.94□□□□□ -2.26
COL8A1P27658 MIR1285-1-201ENST00000408593 84 ntBASIC0.94□□□□□ -2.26
COL8A1P27658 RNU6-894P-201ENST00000517094 105 ntBASIC0.94□□□□□ -2.26
COL8A1P27658 MIR3925-201ENST00000584674 77 ntBASIC0.94□□□□□ -2.26
COL8A1P27658 OR2A41P-201ENST00000473586 105 ntBASIC0.93□□□□□ -2.26
COL8A1P27658 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
COL8A1P27658 RNA5SP62-201ENST00000363457 110 ntBASIC0.92□□□□□ -2.26
COL8A1P27658 RNU6-1111P-201ENST00000391118 107 ntBASIC0.92□□□□□ -2.26
COL8A1P27658 Y_RNA.613-201ENST00000410726 97 ntBASIC0.92□□□□□ -2.26
COL8A1P27658 HAR1A.1-201ENST00000459583 118 ntBASIC0.92□□□□□ -2.26
COL8A1P27658 MIR4698-201ENST00000577795 80 ntBASIC0.92□□□□□ -2.26
COL8A1P27658 MIR4714-201ENST00000580728 77 ntBASIC0.92□□□□□ -2.26
COL8A1P27658 AC138207.3-201ENST00000585289 166 ntBASIC0.92□□□□□ -2.26
COL8A1P27658 SNORD114-21-201ENST00000606412 72 ntBASIC0.92□□□□□ -2.26
COL8A1P27658 RNA5SP257-201ENST00000363023 116 ntBASIC0.91□□□□□ -2.26
COL8A1P27658 RNA5SP128-201ENST00000365305 116 ntBASIC0.91□□□□□ -2.26
COL8A1P27658 MIR4661-201ENST00000582720 75 ntBASIC0.91□□□□□ -2.26
COL8A1P27658 MIR924-201ENST00000638017 53 ntBASIC0.91□□□□□ -2.26
COL8A1P27658 RNU6-1326P-201ENST00000391262 107 ntBASIC0.9□□□□□ -2.27
COL8A1P27658 RNU4-54P-201ENST00000516428 129 ntBASIC0.9□□□□□ -2.27
COL8A1P27658 AL391099.1-201ENST00000624635 187 ntBASIC0.9□□□□□ -2.27
COL8A1P27658 MIR4317-201ENST00000637586 65 ntBASIC0.9□□□□□ -2.27
COL8A1P27658 RNA5SP98-201ENST00000363158 137 ntBASIC0.89□□□□□ -2.27
COL8A1P27658 MIR1468-201ENST00000410600 86 ntBASIC0.89□□□□□ -2.27
COL8A1P27658 RNU6-1133P-201ENST00000410963 100 ntBASIC0.89□□□□□ -2.27
COL8A1P27658 SNORD114-23-201ENST00000363536 72 ntBASIC0.88□□□□□ -2.27
COL8A1P27658 Y_RNA.345-201ENST00000365384 92 ntBASIC0.88□□□□□ -2.27
COL8A1P27658 RNU7-55P-201ENST00000459426 62 ntBASIC0.88□□□□□ -2.27
COL8A1P27658 RNU6-973P-201ENST00000364690 107 ntBASIC0.87□□□□□ -2.27
COL8A1P27658 RNA5SP121-201ENST00000516537 101 ntBASIC0.87□□□□□ -2.27
COL8A1P27658 SCARNA11.2-201ENST00000517183 154 ntBASIC0.87□□□□□ -2.27
COL8A1P27658 RNU6-1238P-201ENST00000517215 102 ntBASIC0.87□□□□□ -2.27
COL8A1P27658 MIR6507-201ENST00000613630 70 ntBASIC0.87□□□□□ -2.27
COL8A1P27658 MIR608-201ENST00000384820 100 ntBASIC0.86□□□□□ -2.27
COL8A1P27658 MIR936-201ENST00000401264 98 ntBASIC0.86□□□□□ -2.27
COL8A1P27658 RNU6-863P-201ENST00000515989 104 ntBASIC0.86□□□□□ -2.27
COL8A1P27658 MIR6513-201ENST00000621188 64 ntBASIC0.86□□□□□ -2.27
COL8A1P27658 MIR499B-201ENST00000636498 73 ntBASIC0.86□□□□□ -2.27
COL8A1P27658 RNU6-1047P-201ENST00000364418 107 ntBASIC0.85□□□□□ -2.27
COL8A1P27658 RNU4-38P-201ENST00000364472 129 ntBASIC0.85□□□□□ -2.27
COL8A1P27658 RNU6-732P-201ENST00000516033 103 ntBASIC0.85□□□□□ -2.27
COL8A1P27658 AC010487.4-201ENST00000637027 61 ntBASIC0.85□□□□□ -2.27
COL8A1P27658 MIR532-201ENST00000385025 91 ntBASIC0.84□□□□□ -2.27
COL8A1P27658 MIR1197-201ENST00000408818 88 ntBASIC0.84□□□□□ -2.27
COL8A1P27658 MIR8087-201ENST00000612745 78 ntBASIC0.84□□□□□ -2.27
COL8A1P27658 MIR6857-201ENST00000613267 93 ntBASIC0.84□□□□□ -2.27
COL8A1P27658 uc_338.36-201ENST00000622331 158 ntBASIC0.84□□□□□ -2.27
COL8A1P27658 SNORA27.2-201ENST00000363365 126 ntBASIC0.83□□□□□ -2.28
COL8A1P27658 Y_RNA.206-201ENST00000364136 102 ntBASIC0.83□□□□□ -2.28
COL8A1P27658 AC096531.1-201ENST00000419107 107 ntBASIC0.83□□□□□ -2.28
COL8A1P27658 AC103810.9-201ENST00000606688 112 ntBASIC0.83□□□□□ -2.28
COL8A1P27658 RNU6-110P-201ENST00000384508 104 ntBASIC0.82□□□□□ -2.28
COL8A1P27658 RNU6-258P-201ENST00000390884 101 ntBASIC0.82□□□□□ -2.28
COL8A1P27658 RNU7-129P-201ENST00000516128 62 ntBASIC0.82□□□□□ -2.28
COL8A1P27658 Y_RNA.699-201ENST00000516803 93 ntBASIC0.82□□□□□ -2.28
COL8A1P27658 MIR4426-201ENST00000640330 63 ntBASIC0.82□□□□□ -2.28
COL8A1P27658 RNU6-900P-201ENST00000384498 102 ntBASIC0.81□□□□□ -2.28
COL8A1P27658 AC108740.1-201ENST00000498629 225 ntBASIC0.81□□□□□ -2.28
COL8A1P27658 uc_338.17-201ENST00000619633 179 ntBASIC0.8□□□□□ -2.28
COL8A1P27658 RNU6-133P-201ENST00000383989 107 ntBASIC0.79□□□□□ -2.28
COL8A1P27658 MIR548Q-201ENST00000408404 100 ntBASIC0.79□□□□□ -2.28
COL8A1P27658 RPL39P28-201ENST00000465655 155 ntBASIC0.78□□□□□ -2.28
COL8A1P27658 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.78□□□□□ -2.28
COL8A1P27658 RNU6-361P-201ENST00000364454 107 ntBASIC0.77□□□□□ -2.29
COL8A1P27658 MIR520D-201ENST00000385002 87 ntBASIC0.77□□□□□ -2.29
COL8A1P27658 RNA5SP193-201ENST00000410353 107 ntBASIC0.77□□□□□ -2.29
COL8A1P27658 SNORD19-201ENST00000391191 68 ntBASIC0.76□□□□□ -2.29
COL8A1P27658 MIR508-201ENST00000384857 115 ntBASIC0.75□□□□□ -2.29
COL8A1P27658 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
COL8A1P27658 MIR330-201ENST00000362196 94 ntBASIC0.74□□□□□ -2.29
COL8A1P27658 RNU6-1233P-201ENST00000362922 102 ntBASIC0.74□□□□□ -2.29
COL8A1P27658 SNORD44.1-201ENST00000363202 61 ntBASIC0.74□□□□□ -2.29
COL8A1P27658 SNORA42.1-201ENST00000363515 137 ntBASIC0.74□□□□□ -2.29
COL8A1P27658 RNY1P9-201ENST00000532431 109 ntBASIC0.74□□□□□ -2.29
COL8A1P27658 MIR6854-201ENST00000614935 69 ntBASIC0.74□□□□□ -2.29
COL8A1P27658 MIR6835-201ENST00000621552 64 ntBASIC0.74□□□□□ -2.29
COL8A1P27658 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
COL8A1P27658 RNU6-455P-201ENST00000384681 107 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms