Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 Y_RNA.129-201ENST00000363392 110 ntBASIC1.35□□□□□ -2.19
CD44P16070 RNU7-95P-201ENST00000459222 64 ntBASIC1.35□□□□□ -2.19
CD44P16070 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
CD44P16070 RNU6-836P-201ENST00000362920 107 ntBASIC1.34□□□□□ -2.19
CD44P16070 AL590095.2-201ENST00000604136 117 ntBASIC1.34□□□□□ -2.19
CD44P16070 AC114755.3-201ENST00000481111 251 ntBASIC1.33□□□□□ -2.2
CD44P16070 uc_338.17-201ENST00000619633 179 ntBASIC1.33□□□□□ -2.2
CD44P16070 AL353691.2-201ENST00000443795 59 ntBASIC1.32□□□□□ -2.2
CD44P16070 RNU6-68P-201ENST00000516576 104 ntBASIC1.32□□□□□ -2.2
CD44P16070 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.31□□□□□ -2.2
CD44P16070 RNU6-955P-201ENST00000410497 104 ntBASIC1.31□□□□□ -2.2
CD44P16070 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC1.31□□□□□ -2.2
CD44P16070 MIR581-201ENST00000384895 96 ntBASIC1.3□□□□□ -2.2
CD44P16070 SNORA26.4-201ENST00000391188 123 ntBASIC1.3□□□□□ -2.2
CD44P16070 AC108667.1-201ENST00000428618 249 ntBASIC1.3□□□□□ -2.2
CD44P16070 MIR151B-201ENST00000584249 96 ntBASIC1.3□□□□□ -2.2
CD44P16070 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC1.3□□□□□ -2.2
CD44P16070 snoU13.23-201ENST00000458863 104 ntBASIC1.29□□□□□ -2.2
CD44P16070 OR2A41P-201ENST00000473586 105 ntBASIC1.29□□□□□ -2.2
CD44P16070 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
CD44P16070 RNU6-863P-201ENST00000515989 104 ntBASIC1.28□□□□□ -2.2
CD44P16070 RNA5SP99-201ENST00000364020 114 ntBASIC1.27□□□□□ -2.21
CD44P16070 Y_RNA.223-201ENST00000364290 113 ntBASIC1.27□□□□□ -2.21
CD44P16070 SNORD56B-201ENST00000384713 71 ntBASIC1.26□□□□□ -2.21
CD44P16070 MIR1285-1-201ENST00000408593 84 ntBASIC1.26□□□□□ -2.21
CD44P16070 AP1B1P2-201ENST00000416196 106 ntBASIC1.26□□□□□ -2.21
CD44P16070 AC013734.1-201ENST00000619329 111 ntBASIC1.26□□□□□ -2.21
CD44P16070 MIR6514-201ENST00000622549 70 ntBASIC1.26□□□□□ -2.21
CD44P16070 RNA5SP224-201ENST00000365069 126 ntBASIC1.25□□□□□ -2.21
CD44P16070 RNU6-901P-201ENST00000384593 106 ntBASIC1.25□□□□□ -2.21
CD44P16070 MIR4524B-201ENST00000581569 115 ntBASIC1.25□□□□□ -2.21
CD44P16070 MIR4661-201ENST00000582720 75 ntBASIC1.25□□□□□ -2.21
CD44P16070 Y_RNA.260-201ENST00000364628 101 ntBASIC1.24□□□□□ -2.21
CD44P16070 Y_RNA.406-201ENST00000383984 100 ntBASIC1.24□□□□□ -2.21
CD44P16070 MIR608-201ENST00000384820 100 ntBASIC1.24□□□□□ -2.21
CD44P16070 AL353997.5-201ENST00000618886 171 ntBASIC1.24□□□□□ -2.21
CD44P16070 AL353770.2-201ENST00000620024 78 ntBASIC1.24□□□□□ -2.21
CD44P16070 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
CD44P16070 MIR548J-201ENST00000408833 112 ntBASIC1.23□□□□□ -2.21
CD44P16070 RNU6ATAC22P-201ENST00000516794 89 ntBASIC1.23□□□□□ -2.21
CD44P16070 RPL35AP4-201ENST00000412007 102 ntBASIC1.22□□□□□ -2.21
CD44P16070 SNORD115-33-201ENST00000363723 82 ntBASIC1.21□□□□□ -2.22
CD44P16070 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CD44P16070 MIR520E-201ENST00000384867 87 ntBASIC1.2□□□□□ -2.22
CD44P16070 CR383656.4-201ENST00000546909 122 ntBASIC1.2□□□□□ -2.22
CD44P16070 RNU6-127P-201ENST00000390897 107 ntBASIC1.19□□□□□ -2.22
CD44P16070 SNORD114-21-201ENST00000606412 72 ntBASIC1.19□□□□□ -2.22
CD44P16070 SNORD44.1-201ENST00000363202 61 ntBASIC1.18□□□□□ -2.22
CD44P16070 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.18□□□□□ -2.22
CD44P16070 RNU6-237P-201ENST00000515985 71 ntBASIC1.18□□□□□ -2.22
CD44P16070 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
CD44P16070 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.17□□□□□ -2.22
CD44P16070 MIR4769-201ENST00000584126 77 ntBASIC1.17□□□□□ -2.22
CD44P16070 Y_RNA.338-201ENST00000365320 114 ntBASIC1.16□□□□□ -2.22
CD44P16070 RNU6-110P-201ENST00000384508 104 ntBASIC1.16□□□□□ -2.22
CD44P16070 MIR148A-201ENST00000362215 68 ntBASIC1.15□□□□□ -2.23
CD44P16070 MIR379-201ENST00000362218 67 ntBASIC1.15□□□□□ -2.23
CD44P16070 MIR378A-201ENST00000362177 66 ntBASIC1.14□□□□□ -2.23
CD44P16070 SNORD18.2-201ENST00000459604 70 ntBASIC1.14□□□□□ -2.23
CD44P16070 U6.97-201ENST00000636904 101 ntBASIC1.14□□□□□ -2.23
CD44P16070 MIR1197-201ENST00000408818 88 ntBASIC1.13□□□□□ -2.23
CD44P16070 MIR548AJ2-201ENST00000408539 92 ntBASIC1.12□□□□□ -2.23
CD44P16070 Y_RNA.603-201ENST00000410571 108 ntBASIC1.12□□□□□ -2.23
CD44P16070 RNA5SP458-201ENST00000516188 119 ntBASIC1.12□□□□□ -2.23
CD44P16070 MIR23C-201ENST00000579846 100 ntBASIC1.12□□□□□ -2.23
CD44P16070 RNU4-38P-201ENST00000364472 129 ntBASIC1.11□□□□□ -2.23
CD44P16070 Y_RNA.335-201ENST00000365299 96 ntBASIC1.1□□□□□ -2.23
CD44P16070 RNU6-180P-201ENST00000516697 61 ntBASIC1.1□□□□□ -2.23
CD44P16070 MIR4280-201ENST00000582178 76 ntBASIC1.1□□□□□ -2.23
CD44P16070 AC103810.9-201ENST00000606688 112 ntBASIC1.1□□□□□ -2.23
CD44P16070 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.23
CD44P16070 SNORD45C-201ENST00000383893 79 ntBASIC1.09□□□□□ -2.23
CD44P16070 RNA5SP163-201ENST00000410304 99 ntBASIC1.09□□□□□ -2.23
CD44P16070 MIR4295-201ENST00000585286 85 ntBASIC1.09□□□□□ -2.23
CD44P16070 FTX_4.1-201ENST00000616291 147 ntBASIC1.09□□□□□ -2.23
CD44P16070 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
CD44P16070 RNU6-392P-201ENST00000364926 101 ntBASIC1.08□□□□□ -2.24
CD44P16070 RNU6-929P-201ENST00000384429 107 ntBASIC1.08□□□□□ -2.24
CD44P16070 RNU6-939P-201ENST00000384634 107 ntBASIC1.08□□□□□ -2.24
CD44P16070 AL445193.1-201ENST00000441183 141 ntBASIC1.08□□□□□ -2.24
CD44P16070 AC244250.2-201ENST00000418731 148 ntBASIC1.07□□□□□ -2.24
CD44P16070 MIR6078-201ENST00000611069 100 ntBASIC1.07□□□□□ -2.24
CD44P16070 RNU6-1169P-201ENST00000363537 103 ntBASIC1.06□□□□□ -2.24
CD44P16070 RNU6-695P-201ENST00000391157 104 ntBASIC1.06□□□□□ -2.24
CD44P16070 RNU6-321P-201ENST00000410912 106 ntBASIC1.06□□□□□ -2.24
CD44P16070 RPS29P1-201ENST00000465274 159 ntBASIC1.06□□□□□ -2.24
CD44P16070 SNORD74.6-201ENST00000364796 70 ntBASIC1.05□□□□□ -2.24
CD44P16070 RNU6-563P-201ENST00000364872 108 ntBASIC1.04□□□□□ -2.24
CD44P16070 MIR507-201ENST00000385234 94 ntBASIC1.04□□□□□ -2.24
CD44P16070 MIR548H2-201ENST00000408874 88 ntBASIC1.04□□□□□ -2.24
CD44P16070 MIR103A1-201ENST00000362165 78 ntBASIC1.03□□□□□ -2.24
CD44P16070 AC120024.2-201ENST00000576526 175 ntBASIC1.03□□□□□ -2.24
CD44P16070 SNORD18C-201ENST00000362704 69 ntBASIC1.02□□□□□ -2.25
CD44P16070 Y_RNA.327-201ENST00000365201 102 ntBASIC1.02□□□□□ -2.25
CD44P16070 MIR892B-201ENST00000401279 77 ntBASIC1.02□□□□□ -2.25
CD44P16070 Y_RNA.676-201ENST00000516393 96 ntBASIC1.01□□□□□ -2.25
CD44P16070 SNORD38.3-201ENST00000516599 73 ntBASIC1.01□□□□□ -2.25
CD44P16070 RNA5SP102-201ENST00000516865 106 ntBASIC1.01□□□□□ -2.25
CD44P16070 MIR6851-201ENST00000617060 67 ntBASIC1.01□□□□□ -2.25
CD44P16070 MIR5087-201ENST00000635826 76 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 232.4 ms