Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 MIR16-2-201ENST00000362117 81 ntBASIC-5.68□□□□□ -3.32
VCANP13611 Y_RNA.387-201ENST00000383918 102 ntBASIC-5.68□□□□□ -3.32
VCANP13611 MIR628-201ENST00000385229 95 ntBASIC-5.69□□□□□ -3.32
VCANP13611 RNU6-209P-201ENST00000384118 107 ntBASIC-5.69□□□□□ -3.32
VCANP13611 Y_RNA.473-201ENST00000384333 102 ntBASIC-5.69□□□□□ -3.32
VCANP13611 RNU6-663P-201ENST00000391105 106 ntBASIC-5.69□□□□□ -3.32
VCANP13611 RNU6-276P-201ENST00000516114 96 ntBASIC-5.69□□□□□ -3.32
VCANP13611 RNU6-633P-201ENST00000362612 103 ntBASIC-5.7□□□□□ -3.32
VCANP13611 AC138305.3-201ENST00000624988 240 ntBASIC-5.7□□□□□ -3.32
VCANP13611 MTATP8P2-201ENST00000435212 202 ntBASIC-5.7□□□□□ -3.32
VCANP13611 Y_RNA.772-201ENST00000606692 102 ntBASIC-5.7□□□□□ -3.32
VCANP13611 RNU6-195P-201ENST00000411352 109 ntBASIC-5.7□□□□□ -3.32
VCANP13611 RNU6-890P-201ENST00000384121 107 ntBASIC-5.71□□□□□ -3.32
VCANP13611 RNU6-1158P-201ENST00000391167 107 ntBASIC-5.71□□□□□ -3.32
VCANP13611 AC116353.3-201ENST00000511215 249 ntBASIC-5.71□□□□□ -3.32
VCANP13611 RNU6-259P-201ENST00000383999 107 ntBASIC-5.72□□□□□ -3.33
VCANP13611 MIR3149-201ENST00000584629 83 ntBASIC-5.72□□□□□ -3.33
VCANP13611 RNU6-996P-201ENST00000365438 107 ntBASIC-5.72□□□□□ -3.33
VCANP13611 RNU6-326P-201ENST00000365480 107 ntBASIC-5.73□□□□□ -3.33
VCANP13611 RNU6-907P-201ENST00000390924 102 ntBASIC-5.73□□□□□ -3.33
VCANP13611 RNU7-61P-201ENST00000515897 61 ntBASIC-5.73□□□□□ -3.33
VCANP13611 AC097520.1-201ENST00000624435 385 ntBASIC-5.73□□□□□ -3.33
VCANP13611 Y_RNA.586-201ENST00000391146 98 ntBASIC-5.73□□□□□ -3.33
VCANP13611 MIR548P-201ENST00000408336 84 ntBASIC-5.74□□□□□ -3.33
VCANP13611 Y_RNA.686-201ENST00000516548 134 ntBASIC-5.75□□□□□ -3.33
VCANP13611 MIR3121-201ENST00000579680 77 ntBASIC-5.75□□□□□ -3.33
VCANP13611 AL035470.1-201ENST00000622571 220 ntBASIC-5.76□□□□□ -3.33
VCANP13611 MIR3682-201ENST00000581338 84 ntBASIC-5.76□□□□□ -3.33
VCANP13611 DLEU2_1.2-201ENST00000614667 120 ntBASIC-5.76□□□□□ -3.33
VCANP13611 RNU6-1252P-201ENST00000363054 104 ntBASIC-5.77□□□□□ -3.33
VCANP13611 ZNF519P2-201ENST00000557032 169 ntBASIC-5.77□□□□□ -3.33
VCANP13611 AC037487.3-201ENST00000606668 112 ntBASIC-5.78□□□□□ -3.33
VCANP13611 RNY4P34-201ENST00000364779 95 ntBASIC-5.78□□□□□ -3.33
VCANP13611 RNU6-770P-201ENST00000363929 105 ntBASIC-5.78□□□□□ -3.34
VCANP13611 RNU7-63P-201ENST00000459054 62 ntBASIC-5.78□□□□□ -3.34
VCANP13611 MIR4679-2-201ENST00000578358 77 ntBASIC-5.78□□□□□ -3.34
VCANP13611 MT-TL1-201ENST00000386347 75 ntBASIC-5.79□□□□□ -3.34
VCANP13611 Y_RNA.594-201ENST00000410373 140 ntBASIC-5.79□□□□□ -3.34
VCANP13611 AC012414.2-201ENST00000559474 187 ntBASIC-5.79□□□□□ -3.34
VCANP13611 RNA5SP401-201ENST00000515920 127 ntBASIC-5.8□□□□□ -3.34
VCANP13611 RNU6-768P-201ENST00000384683 107 ntBASIC-5.8□□□□□ -3.34
VCANP13611 SNORA75.5-201ENST00000391291 81 ntBASIC-5.8□□□□□ -3.34
VCANP13611 RNU6-133P-201ENST00000383989 107 ntBASIC-5.81□□□□□ -3.34
VCANP13611 RNU6-574P-201ENST00000384265 107 ntBASIC-5.81□□□□□ -3.34
VCANP13611 AC103706.3-201ENST00000636297 85 ntBASIC-5.81□□□□□ -3.34
VCANP13611 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-5.82□□□□□ -3.34
VCANP13611 MIR6128-201ENST00000615528 109 ntBASIC-5.82□□□□□ -3.34
VCANP13611 AL160413.1-201ENST00000622780 310 ntBASIC-5.82□□□□□ -3.34
VCANP13611 RNU7-4P-201ENST00000516961 62 ntBASIC-5.83□□□□□ -3.34
VCANP13611 SNORA25.1-201ENST00000362326 128 ntBASIC-5.83□□□□□ -3.34
VCANP13611 U8.20-201ENST00000459445 131 ntBASIC-5.83□□□□□ -3.34
VCANP13611 AC114801.3-201ENST00000510231 177 ntBASIC-5.83□□□□□ -3.34
VCANP13611 RNU6-797P-201ENST00000363101 109 ntBASIC-5.85□□□□□ -3.35
VCANP13611 RNU6-959P-201ENST00000384671 107 ntBASIC-5.85□□□□□ -3.35
VCANP13611 RNU6-687P-201ENST00000516443 89 ntBASIC-5.85□□□□□ -3.35
VCANP13611 MIR6844-201ENST00000637122 62 ntBASIC-5.85□□□□□ -3.35
VCANP13611 AC110620.1-201ENST00000416042 228 ntBASIC-5.86□□□□□ -3.35
VCANP13611 MIR4511-201ENST00000582784 87 ntBASIC-5.86□□□□□ -3.35
VCANP13611 SNORA25.4-201ENST00000363666 124 ntBASIC-5.87□□□□□ -3.35
VCANP13611 RNU7-169P-201ENST00000459456 61 ntBASIC-5.87□□□□□ -3.35
VCANP13611 AC072026.1-201ENST00000605023 201 ntBASIC-5.87□□□□□ -3.35
VCANP13611 RNU5E-5P-201ENST00000365379 116 ntBASIC-5.87□□□□□ -3.35
VCANP13611 U2.14-201ENST00000615943 113 ntBASIC-5.87□□□□□ -3.35
VCANP13611 Y_RNA.713-201ENST00000517013 96 ntBASIC-5.88□□□□□ -3.35
VCANP13611 RNU6-332P-201ENST00000391193 108 ntBASIC-5.88□□□□□ -3.35
VCANP13611 AL445567.1-201ENST00000439121 144 ntBASIC-5.88□□□□□ -3.35
VCANP13611 RNU6-315P-201ENST00000362666 107 ntBASIC-5.89□□□□□ -3.35
VCANP13611 AC130289.1-201ENST00000577321 73 ntBASIC-5.89□□□□□ -3.35
VCANP13611 Y_RNA.187-201ENST00000363918 113 ntBASIC-5.9□□□□□ -3.35
VCANP13611 RNU7-66P-201ENST00000459469 62 ntBASIC-5.9□□□□□ -3.35
VCANP13611 MTND5P5-201ENST00000503764 376 ntBASIC-5.9□□□□□ -3.35
VCANP13611 RNU6-1088P-201ENST00000516850 104 ntBASIC-5.9□□□□□ -3.35
VCANP13611 U6.103-201ENST00000637085 61 ntBASIC-5.9□□□□□ -3.35
VCANP13611 RNU6-539P-201ENST00000516665 103 ntBASIC-5.9□□□□□ -3.35
VCANP13611 RNU6-256P-201ENST00000516747 97 ntBASIC-5.91□□□□□ -3.36
VCANP13611 Y_RNA.620-201ENST00000411009 88 ntBASIC-5.92□□□□□ -3.36
VCANP13611 RNU6-446P-201ENST00000362827 106 ntBASIC-5.92□□□□□ -3.36
VCANP13611 RNU6-468P-201ENST00000384003 109 ntBASIC-5.92□□□□□ -3.36
VCANP13611 DLEU2_2.2-201ENST00000615474 90 ntBASIC-5.93□□□□□ -3.36
VCANP13611 MIR548T-201ENST00000408369 74 ntBASIC-5.93□□□□□ -3.36
VCANP13611 U7.3-201ENST00000616123 62 ntBASIC-5.94□□□□□ -3.36
VCANP13611 AC006160.2-201ENST00000637708 154 ntBASIC-5.95□□□□□ -3.36
VCANP13611 RNY3P15-201ENST00000516297 97 ntBASIC-5.96□□□□□ -3.36
VCANP13611 MIR4679-1-201ENST00000637619 75 ntBASIC-5.96□□□□□ -3.36
VCANP13611 MTND2P23-201ENST00000422990 651 ntBASIC-5.97□□□□□ -3.36
VCANP13611 MIR3662-201ENST00000637030 95 ntBASIC-5.97□□□□□ -3.36
VCANP13611 SNORD113-4-201ENST00000364802 75 ntBASIC-5.97□□□□□ -3.36
VCANP13611 SNORD33.1-201ENST00000516213 88 ntBASIC-5.97□□□□□ -3.36
VCANP13611 MIR8084-201ENST00000614105 89 ntBASIC-5.97□□□□□ -3.36
VCANP13611 RNU6-883P-201ENST00000384597 107 ntBASIC-5.97□□□□□ -3.37
VCANP13611 RNU6-261P-201ENST00000459506 102 ntBASIC-5.98□□□□□ -3.37
VCANP13611 RNU6-904P-201ENST00000516206 101 ntBASIC-5.98□□□□□ -3.37
VCANP13611 RNU6-1275P-201ENST00000391087 107 ntBASIC-6□□□□□ -3.37
VCANP13611 AC096644.2-201ENST00000429278 159 ntBASIC-6□□□□□ -3.37
VCANP13611 RNU5F-7P-201ENST00000363696 115 ntBASIC-6□□□□□ -3.37
VCANP13611 SNORD115-46-201ENST00000390982 71 ntBASIC-6.01□□□□□ -3.37
VCANP13611 RNU6-1046P-201ENST00000516538 107 ntBASIC-6.01□□□□□ -3.37
VCANP13611 Y_RNA.41-201ENST00000362646 102 ntBASIC-6.01□□□□□ -3.37
VCANP13611 RNU6-307P-201ENST00000516743 106 ntBASIC-6.01□□□□□ -3.37
VCANP13611 SNORD116-22-201ENST00000384430 92 ntBASIC-6.01□□□□□ -3.37
Retrieved 100 of 98,524 protein–RNA pairs in 226.6 ms