Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 RNU6-419P-201ENST00000517030 63 ntBASIC0.77□□□□□ -2.29
HOXD8P13378 U6.58-201ENST00000613107 107 ntBASIC0.77□□□□□ -2.29
HOXD8P13378 MIR499B-201ENST00000636498 73 ntBASIC0.77□□□□□ -2.29
HOXD8P13378 Y_RNA.109-201ENST00000363215 102 ntBASIC0.76□□□□□ -2.29
HOXD8P13378 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
HOXD8P13378 SNORA49-201ENST00000386157 136 ntBASIC0.76□□□□□ -2.29
HOXD8P13378 RNU6-175P-201ENST00000516896 107 ntBASIC0.76□□□□□ -2.29
HOXD8P13378 RNU6-247P-201ENST00000362636 107 ntBASIC0.75□□□□□ -2.29
HOXD8P13378 MIR548F3-201ENST00000408509 87 ntBASIC0.75□□□□□ -2.29
HOXD8P13378 MIR106A-201ENST00000384870 81 ntBASIC0.74□□□□□ -2.29
HOXD8P13378 MIR876-201ENST00000401147 81 ntBASIC0.74□□□□□ -2.29
HOXD8P13378 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.74□□□□□ -2.29
HOXD8P13378 RNU6-782P-201ENST00000516852 104 ntBASIC0.74□□□□□ -2.29
HOXD8P13378 RNU6-1206P-201ENST00000516339 103 ntBASIC0.72□□□□□ -2.29
HOXD8P13378 MIR6086-201ENST00000638065 55 ntBASIC0.72□□□□□ -2.29
HOXD8P13378 RNA5SP347-201ENST00000362445 119 ntBASIC0.71□□□□□ -2.3
HOXD8P13378 RNU6-995P-201ENST00000391244 107 ntBASIC0.71□□□□□ -2.3
HOXD8P13378 MIR4490-201ENST00000582647 84 ntBASIC0.71□□□□□ -2.3
HOXD8P13378 SNORD115-23-201ENST00000364461 82 ntBASIC0.7□□□□□ -2.3
HOXD8P13378 MIR548AA1-201ENST00000384971 97 ntBASIC0.7□□□□□ -2.3
HOXD8P13378 AL353803.5-201ENST00000599815 141 ntBASIC0.7□□□□□ -2.3
HOXD8P13378 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.7□□□□□ -2.3
HOXD8P13378 SNORD45.2-201ENST00000363552 72 ntBASIC0.69□□□□□ -2.3
HOXD8P13378 RNA5SP499-201ENST00000363982 119 ntBASIC0.69□□□□□ -2.3
HOXD8P13378 RNU6-828P-201ENST00000364876 107 ntBASIC0.69□□□□□ -2.3
HOXD8P13378 SNORA62.4-201ENST00000365504 151 ntBASIC0.69□□□□□ -2.3
HOXD8P13378 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.69□□□□□ -2.3
HOXD8P13378 SCARNA11.2-201ENST00000517183 154 ntBASIC0.69□□□□□ -2.3
HOXD8P13378 AP000676.1-201ENST00000533307 52 ntBASIC0.69□□□□□ -2.3
HOXD8P13378 snoR1.1-201ENST00000628177 80 ntBASIC0.69□□□□□ -2.3
HOXD8P13378 VTRNA1-3-201ENST00000365645 89 ntBASIC0.68□□□□□ -2.3
HOXD8P13378 RNU6-696P-201ENST00000390834 107 ntBASIC0.68□□□□□ -2.3
HOXD8P13378 RN7SL660P-201ENST00000614852 299 ntBASIC0.68□□□□□ -2.3
HOXD8P13378 SNORD44.1-201ENST00000363202 61 ntBASIC0.67□□□□□ -2.3
HOXD8P13378 AC108676.2-201ENST00000605225 163 ntBASIC0.67□□□□□ -2.3
HOXD8P13378 Y_RNA.69-201ENST00000362885 109 ntBASIC0.66□□□□□ -2.3
HOXD8P13378 RNA5SP98-201ENST00000363158 137 ntBASIC0.66□□□□□ -2.3
HOXD8P13378 MIR329-2-201ENST00000385029 84 ntBASIC0.66□□□□□ -2.3
HOXD8P13378 SNORA68.3-201ENST00000515906 83 ntBASIC0.66□□□□□ -2.3
HOXD8P13378 MIR548AG1-201ENST00000579932 66 ntBASIC0.66□□□□□ -2.3
HOXD8P13378 MIR3925-201ENST00000584674 77 ntBASIC0.66□□□□□ -2.3
HOXD8P13378 RNU6-598P-201ENST00000364017 105 ntBASIC0.65□□□□□ -2.31
HOXD8P13378 RNU7-151P-201ENST00000516930 53 ntBASIC0.65□□□□□ -2.31
HOXD8P13378 MIR4432-201ENST00000581823 84 ntBASIC0.65□□□□□ -2.31
HOXD8P13378 AL627230.5-201ENST00000619807 58 ntBASIC0.65□□□□□ -2.31
HOXD8P13378 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
HOXD8P13378 MIR103A1-201ENST00000362165 78 ntBASIC0.64□□□□□ -2.31
HOXD8P13378 AL451105.1-201ENST00000450005 189 ntBASIC0.63□□□□□ -2.31
HOXD8P13378 uc_338.17-201ENST00000619633 179 ntBASIC0.63□□□□□ -2.31
HOXD8P13378 MIR125B1-201ENST00000385236 88 ntBASIC0.62□□□□□ -2.31
HOXD8P13378 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.62□□□□□ -2.31
HOXD8P13378 RNU6-1262P-201ENST00000516217 96 ntBASIC0.62□□□□□ -2.31
HOXD8P13378 RNA5SP285-201ENST00000516619 119 ntBASIC0.62□□□□□ -2.31
HOXD8P13378 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.62□□□□□ -2.31
HOXD8P13378 AC108740.1-201ENST00000498629 225 ntBASIC0.61□□□□□ -2.31
HOXD8P13378 MIR643-201ENST00000385267 97 ntBASIC0.6□□□□□ -2.31
HOXD8P13378 RNU6-1133P-201ENST00000410963 100 ntBASIC0.6□□□□□ -2.31
HOXD8P13378 MIR548AL-201ENST00000578416 97 ntBASIC0.6□□□□□ -2.31
HOXD8P13378 MIRLET7D-201ENST00000362263 87 ntBASIC0.59□□□□□ -2.31
HOXD8P13378 RNU6-973P-201ENST00000364690 107 ntBASIC0.59□□□□□ -2.31
HOXD8P13378 Y_RNA.321-201ENST00000365149 102 ntBASIC0.59□□□□□ -2.31
HOXD8P13378 MIR545-201ENST00000385085 106 ntBASIC0.59□□□□□ -2.31
HOXD8P13378 RNU6-127P-201ENST00000390897 107 ntBASIC0.59□□□□□ -2.31
HOXD8P13378 SNORD57-201ENST00000448188 72 ntBASIC0.59□□□□□ -2.31
HOXD8P13378 RNU7-55P-201ENST00000459426 62 ntBASIC0.59□□□□□ -2.31
HOXD8P13378 AC104408.1-201ENST00000605241 170 ntBASIC0.59□□□□□ -2.31
HOXD8P13378 RNU6-924P-201ENST00000362926 108 ntBASIC0.58□□□□□ -2.32
HOXD8P13378 RNU6-900P-201ENST00000384498 102 ntBASIC0.58□□□□□ -2.32
HOXD8P13378 MIR579-201ENST00000385221 98 ntBASIC0.58□□□□□ -2.32
HOXD8P13378 SNORD63.1-201ENST00000516178 80 ntBASIC0.58□□□□□ -2.32
HOXD8P13378 U2.18-201ENST00000622185 84 ntBASIC0.58□□□□□ -2.32
HOXD8P13378 RNU6-815P-201ENST00000384080 113 ntBASIC0.57□□□□□ -2.32
HOXD8P13378 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
HOXD8P13378 MIR892B-201ENST00000401279 77 ntBASIC0.57□□□□□ -2.32
HOXD8P13378 AL391099.1-201ENST00000624635 187 ntBASIC0.57□□□□□ -2.32
HOXD8P13378 RNU6-1204P-201ENST00000363948 107 ntBASIC0.56□□□□□ -2.32
HOXD8P13378 RNA5SP63-201ENST00000391225 112 ntBASIC0.56□□□□□ -2.32
HOXD8P13378 Y_RNA.613-201ENST00000410726 97 ntBASIC0.56□□□□□ -2.32
HOXD8P13378 Y_RNA.698-201ENST00000516798 118 ntBASIC0.56□□□□□ -2.32
HOXD8P13378 MIR148A-201ENST00000362215 68 ntBASIC0.55□□□□□ -2.32
HOXD8P13378 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.55□□□□□ -2.32
HOXD8P13378 CR383656.4-201ENST00000546909 122 ntBASIC0.55□□□□□ -2.32
HOXD8P13378 MIR6514-201ENST00000622549 70 ntBASIC0.55□□□□□ -2.32
HOXD8P13378 AC096531.1-201ENST00000419107 107 ntBASIC0.54□□□□□ -2.32
HOXD8P13378 MIR4514-201ENST00000581410 57 ntBASIC0.54□□□□□ -2.32
HOXD8P13378 AL445584.3-201ENST00000617173 78 ntBASIC0.54□□□□□ -2.32
HOXD8P13378 uc_338.36-201ENST00000622331 158 ntBASIC0.54□□□□□ -2.32
HOXD8P13378 MIR5087-201ENST00000635826 76 ntBASIC0.54□□□□□ -2.32
HOXD8P13378 U7.5-201ENST00000517224 61 ntBASIC0.53□□□□□ -2.32
HOXD8P13378 RNU6-1174P-201ENST00000517278 101 ntBASIC0.53□□□□□ -2.32
HOXD8P13378 MIR6759-201ENST00000638110 65 ntBASIC0.53□□□□□ -2.32
HOXD8P13378 RNU6-1267P-201ENST00000410747 107 ntBASIC0.52□□□□□ -2.33
HOXD8P13378 MIR4743-201ENST00000584576 69 ntBASIC0.52□□□□□ -2.33
HOXD8P13378 AC023932.2-201ENST00000603176 175 ntBASIC0.52□□□□□ -2.33
HOXD8P13378 MIR6888-201ENST00000621977 67 ntBASIC0.52□□□□□ -2.33
HOXD8P13378 AC090625.1-201ENST00000357130 210 ntBASIC0.51□□□□□ -2.33
HOXD8P13378 RNA5SP163-201ENST00000410304 99 ntBASIC0.51□□□□□ -2.33
HOXD8P13378 SNORA62.5-201ENST00000516634 120 ntBASIC0.51□□□□□ -2.33
HOXD8P13378 MIR4464-201ENST00000580818 92 ntBASIC0.51□□□□□ -2.33
HOXD8P13378 Y_RNA.139-201ENST00000363464 102 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms