Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 RNU6-502P-201ENST00000362419 108 ntBASIC0.7□□□□□ -2.3
SRFP11831 MIR579-201ENST00000385221 98 ntBASIC0.7□□□□□ -2.3
SRFP11831 RNA5SP470-201ENST00000516463 106 ntBASIC0.7□□□□□ -2.3
SRFP11831 MIR429-201ENST00000362106 83 ntBASIC0.69□□□□□ -2.3
SRFP11831 MIR146A-201ENST00000385201 99 ntBASIC0.69□□□□□ -2.3
SRFP11831 SNORA40B-201ENST00000385573 128 ntBASIC0.69□□□□□ -2.3
SRFP11831 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.69□□□□□ -2.3
SRFP11831 RNA5SP128-201ENST00000365305 116 ntBASIC0.68□□□□□ -2.3
SRFP11831 RNU6-945P-201ENST00000383947 107 ntBASIC0.68□□□□□ -2.3
SRFP11831 RNU6-863P-201ENST00000515989 104 ntBASIC0.68□□□□□ -2.3
SRFP11831 MIR4636-201ENST00000582271 80 ntBASIC0.68□□□□□ -2.3
SRFP11831 MIR3925-201ENST00000584674 77 ntBASIC0.68□□□□□ -2.3
SRFP11831 AL353803.5-201ENST00000599815 141 ntBASIC0.68□□□□□ -2.3
SRFP11831 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
SRFP11831 SCARNA11.2-201ENST00000517183 154 ntBASIC0.67□□□□□ -2.3
SRFP11831 uc_338.36-201ENST00000622331 158 ntBASIC0.67□□□□□ -2.3
SRFP11831 RNU4-33P-201ENST00000364316 85 ntBASIC0.66□□□□□ -2.3
SRFP11831 RNU6-30P-201ENST00000384561 107 ntBASIC0.66□□□□□ -2.3
SRFP11831 RNU6-980P-201ENST00000516925 103 ntBASIC0.66□□□□□ -2.3
SRFP11831 U2.18-201ENST00000622185 84 ntBASIC0.66□□□□□ -2.3
SRFP11831 snoR1.1-201ENST00000628177 80 ntBASIC0.66□□□□□ -2.3
SRFP11831 MIR4432-201ENST00000581823 84 ntBASIC0.65□□□□□ -2.31
SRFP11831 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.65□□□□□ -2.31
SRFP11831 RNA5SP499-201ENST00000363982 119 ntBASIC0.64□□□□□ -2.31
SRFP11831 SNORD44.1-201ENST00000363202 61 ntBASIC0.63□□□□□ -2.31
SRFP11831 MIR4490-201ENST00000582647 84 ntBASIC0.63□□□□□ -2.31
SRFP11831 RNU6-598P-201ENST00000364017 105 ntBASIC0.62□□□□□ -2.31
SRFP11831 MIR6759-201ENST00000638110 65 ntBASIC0.62□□□□□ -2.31
SRFP11831 MIR106A-201ENST00000384870 81 ntBASIC0.61□□□□□ -2.31
SRFP11831 RNU7-88P-201ENST00000458752 63 ntBASIC0.61□□□□□ -2.31
SRFP11831 SNORA62.5-201ENST00000516634 120 ntBASIC0.61□□□□□ -2.31
SRFP11831 MIR548X-201ENST00000580069 75 ntBASIC0.61□□□□□ -2.31
SRFP11831 MIR5087-201ENST00000635826 76 ntBASIC0.61□□□□□ -2.31
SRFP11831 MIR103A1-201ENST00000362165 78 ntBASIC0.6□□□□□ -2.31
SRFP11831 MIR876-201ENST00000401147 81 ntBASIC0.6□□□□□ -2.31
SRFP11831 RNU7-151P-201ENST00000516930 53 ntBASIC0.6□□□□□ -2.31
SRFP11831 MIR5589-201ENST00000579442 60 ntBASIC0.6□□□□□ -2.31
SRFP11831 AC108676.2-201ENST00000605225 163 ntBASIC0.6□□□□□ -2.31
SRFP11831 MIR329-2-201ENST00000385029 84 ntBASIC0.59□□□□□ -2.31
SRFP11831 MIR643-201ENST00000385267 97 ntBASIC0.59□□□□□ -2.31
SRFP11831 RNA5SP63-201ENST00000391225 112 ntBASIC0.59□□□□□ -2.31
SRFP11831 RNU6-930P-201ENST00000390938 100 ntBASIC0.58□□□□□ -2.32
SRFP11831 RNU6-1133P-201ENST00000410963 100 ntBASIC0.58□□□□□ -2.32
SRFP11831 SNORA68.3-201ENST00000515906 83 ntBASIC0.58□□□□□ -2.32
SRFP11831 RNA5SP98-201ENST00000363158 137 ntBASIC0.57□□□□□ -2.32
SRFP11831 AC108740.1-201ENST00000498629 225 ntBASIC0.57□□□□□ -2.32
SRFP11831 MIR4514-201ENST00000581410 57 ntBASIC0.57□□□□□ -2.32
SRFP11831 SNORD115-23-201ENST00000364461 82 ntBASIC0.56□□□□□ -2.32
SRFP11831 RNU6-127P-201ENST00000390897 107 ntBASIC0.56□□□□□ -2.32
SRFP11831 RNU6-995P-201ENST00000391244 107 ntBASIC0.56□□□□□ -2.32
SRFP11831 RNA5SP25-201ENST00000410815 110 ntBASIC0.55□□□□□ -2.32
SRFP11831 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.55□□□□□ -2.32
SRFP11831 RNU6-1262P-201ENST00000516217 96 ntBASIC0.55□□□□□ -2.32
SRFP11831 U7.5-201ENST00000517224 61 ntBASIC0.55□□□□□ -2.32
SRFP11831 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.55□□□□□ -2.32
SRFP11831 RNU6-815P-201ENST00000384080 113 ntBASIC0.54□□□□□ -2.32
SRFP11831 MIR4723-201ENST00000585070 81 ntBASIC0.54□□□□□ -2.32
SRFP11831 MIR6514-201ENST00000622549 70 ntBASIC0.54□□□□□ -2.32
SRFP11831 AL391099.1-201ENST00000624635 187 ntBASIC0.54□□□□□ -2.32
SRFP11831 Z95118.1-201ENST00000421372 247 ntBASIC0.53□□□□□ -2.32
SRFP11831 Y_RNA.698-201ENST00000516798 118 ntBASIC0.53□□□□□ -2.32
SRFP11831 MIR4802-201ENST00000581881 80 ntBASIC0.53□□□□□ -2.32
SRFP11831 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.53□□□□□ -2.33
SRFP11831 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
SRFP11831 MIRLET7D-201ENST00000362263 87 ntBASIC0.52□□□□□ -2.33
SRFP11831 Y_RNA.69-201ENST00000362885 109 ntBASIC0.52□□□□□ -2.33
SRFP11831 RNU6-696P-201ENST00000390834 107 ntBASIC0.52□□□□□ -2.33
SRFP11831 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.52□□□□□ -2.33
SRFP11831 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
SRFP11831 RNU6-419P-201ENST00000517030 63 ntBASIC0.52□□□□□ -2.33
SRFP11831 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
SRFP11831 MIR6888-201ENST00000621977 67 ntBASIC0.52□□□□□ -2.33
SRFP11831 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
SRFP11831 RNU6-924P-201ENST00000362926 108 ntBASIC0.51□□□□□ -2.33
SRFP11831 MIR92A1-201ENST00000385233 78 ntBASIC0.51□□□□□ -2.33
SRFP11831 RNU6-1267P-201ENST00000410747 107 ntBASIC0.51□□□□□ -2.33
SRFP11831 MIR409-201ENST00000362237 79 ntBASIC0.5□□□□□ -2.33
SRFP11831 SNORD114-15-201ENST00000364687 72 ntBASIC0.5□□□□□ -2.33
SRFP11831 MIR548AA1-201ENST00000384971 97 ntBASIC0.5□□□□□ -2.33
SRFP11831 RNA5SP163-201ENST00000410304 99 ntBASIC0.5□□□□□ -2.33
SRFP11831 RNU6-1206P-201ENST00000516339 103 ntBASIC0.5□□□□□ -2.33
SRFP11831 RNU6-455P-201ENST00000384681 107 ntBASIC0.49□□□□□ -2.33
SRFP11831 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.49□□□□□ -2.33
SRFP11831 RNA5SP67-201ENST00000516422 131 ntBASIC0.49□□□□□ -2.33
SRFP11831 MIR4464-201ENST00000580818 92 ntBASIC0.49□□□□□ -2.33
SRFP11831 MIR5704-201ENST00000584029 77 ntBASIC0.49□□□□□ -2.33
SRFP11831 AC023932.2-201ENST00000603176 175 ntBASIC0.49□□□□□ -2.33
SRFP11831 RNU7-160P-201ENST00000516660 62 ntBASIC0.48□□□□□ -2.33
SRFP11831 RNU6-1174P-201ENST00000517278 101 ntBASIC0.48□□□□□ -2.33
SRFP11831 AL445584.3-201ENST00000617173 78 ntBASIC0.48□□□□□ -2.33
SRFP11831 AC090625.1-201ENST00000357130 210 ntBASIC0.46□□□□□ -2.34
SRFP11831 RNA5SP368-201ENST00000364298 116 ntBASIC0.46□□□□□ -2.34
SRFP11831 SNORA50A-201ENST00000384225 134 ntBASIC0.46□□□□□ -2.34
SRFP11831 MIR545-201ENST00000385085 106 ntBASIC0.46□□□□□ -2.34
SRFP11831 RNA5SP266-201ENST00000410273 108 ntBASIC0.46□□□□□ -2.34
SRFP11831 SNORD63.1-201ENST00000516178 80 ntBASIC0.46□□□□□ -2.34
SRFP11831 RNU6-758P-201ENST00000516292 89 ntBASIC0.46□□□□□ -2.34
SRFP11831 RNU6-973P-201ENST00000364690 107 ntBASIC0.45□□□□□ -2.34
SRFP11831 RNU6-828P-201ENST00000364876 107 ntBASIC0.45□□□□□ -2.34
SRFP11831 SNORA62.4-201ENST00000365504 151 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms