Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 MIR593-201ENST00000384856 100 ntBASIC0.25□□□□□ -2.37
SNHG28P0DPA3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.25□□□□□ -2.37
SNHG28P0DPA3 RNA5SP470-201ENST00000516463 106 ntBASIC0.25□□□□□ -2.37
SNHG28P0DPA3 MIR1273G-201ENST00000577677 100 ntBASIC0.25□□□□□ -2.37
SNHG28P0DPA3 MIR5704-201ENST00000584029 77 ntBASIC0.25□□□□□ -2.37
SNHG28P0DPA3 U6.58-201ENST00000613107 107 ntBASIC0.25□□□□□ -2.37
SNHG28P0DPA3 U6.59-201ENST00000615686 107 ntBASIC0.25□□□□□ -2.37
SNHG28P0DPA3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.24□□□□□ -2.37
SNHG28P0DPA3 SNORA40.16-201ENST00000517238 121 ntBASIC0.24□□□□□ -2.37
SNHG28P0DPA3 AC104408.1-201ENST00000605241 170 ntBASIC0.24□□□□□ -2.37
SNHG28P0DPA3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.24□□□□□ -2.37
SNHG28P0DPA3 MIR4432-201ENST00000581823 84 ntBASIC0.23□□□□□ -2.37
SNHG28P0DPA3 U2.18-201ENST00000622185 84 ntBASIC0.23□□□□□ -2.37
SNHG28P0DPA3 AC244250.2-201ENST00000418731 148 ntBASIC0.22□□□□□ -2.37
SNHG28P0DPA3 AC023932.2-201ENST00000603176 175 ntBASIC0.22□□□□□ -2.37
SNHG28P0DPA3 MIR6718-201ENST00000616153 80 ntBASIC0.22□□□□□ -2.37
SNHG28P0DPA3 AL445584.3-201ENST00000617173 78 ntBASIC0.22□□□□□ -2.37
SNHG28P0DPA3 AC090625.1-201ENST00000357130 210 ntBASIC0.21□□□□□ -2.38
SNHG28P0DPA3 RNA5SP214-201ENST00000363378 118 ntBASIC0.21□□□□□ -2.38
SNHG28P0DPA3 RNU6-455P-201ENST00000384681 107 ntBASIC0.21□□□□□ -2.38
SNHG28P0DPA3 SNORD56B-201ENST00000384713 71 ntBASIC0.21□□□□□ -2.38
SNHG28P0DPA3 MIR145-201ENST00000384967 88 ntBASIC0.21□□□□□ -2.38
SNHG28P0DPA3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.21□□□□□ -2.38
SNHG28P0DPA3 SNORD116.2-201ENST00000391251 93 ntBASIC0.21□□□□□ -2.38
SNHG28P0DPA3 RNU6-172P-201ENST00000411000 93 ntBASIC0.21□□□□□ -2.38
SNHG28P0DPA3 CR383656.4-201ENST00000546909 122 ntBASIC0.21□□□□□ -2.38
SNHG28P0DPA3 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
SNHG28P0DPA3 AL391099.1-201ENST00000624635 187 ntBASIC0.21□□□□□ -2.38
SNHG28P0DPA3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.2□□□□□ -2.38
SNHG28P0DPA3 SNORD114-9-201ENST00000364370 72 ntBASIC0.2□□□□□ -2.38
SNHG28P0DPA3 RNU6-900P-201ENST00000384498 102 ntBASIC0.2□□□□□ -2.38
SNHG28P0DPA3 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
SNHG28P0DPA3 AC096531.1-201ENST00000419107 107 ntBASIC0.2□□□□□ -2.38
SNHG28P0DPA3 MIR4514-201ENST00000581410 57 ntBASIC0.2□□□□□ -2.38
SNHG28P0DPA3 MIR4490-201ENST00000582647 84 ntBASIC0.2□□□□□ -2.38
SNHG28P0DPA3 AC108676.2-201ENST00000605225 163 ntBASIC0.2□□□□□ -2.38
SNHG28P0DPA3 MIR4315-1-201ENST00000636800 73 ntBASIC0.2□□□□□ -2.38
SNHG28P0DPA3 MIR4315-2-201ENST00000640925 73 ntBASIC0.2□□□□□ -2.38
SNHG28P0DPA3 SNORD114-5-201ENST00000362928 70 ntBASIC0.19□□□□□ -2.38
SNHG28P0DPA3 RNU6-810P-201ENST00000364001 107 ntBASIC0.19□□□□□ -2.38
SNHG28P0DPA3 RNU6-973P-201ENST00000364690 107 ntBASIC0.19□□□□□ -2.38
SNHG28P0DPA3 MIR1295A-201ENST00000408463 79 ntBASIC0.19□□□□□ -2.38
SNHG28P0DPA3 RNU7-165P-201ENST00000458864 60 ntBASIC0.19□□□□□ -2.38
SNHG28P0DPA3 AC114755.3-201ENST00000481111 251 ntBASIC0.19□□□□□ -2.38
SNHG28P0DPA3 MIR579-201ENST00000385221 98 ntBASIC0.18□□□□□ -2.38
SNHG28P0DPA3 RNU7-88P-201ENST00000458752 63 ntBASIC0.18□□□□□ -2.38
SNHG28P0DPA3 RNA5SP330-201ENST00000517096 96 ntBASIC0.18□□□□□ -2.38
SNHG28P0DPA3 U7.5-201ENST00000517224 61 ntBASIC0.18□□□□□ -2.38
SNHG28P0DPA3 SNORA42.1-201ENST00000363515 137 ntBASIC0.17□□□□□ -2.38
SNHG28P0DPA3 RNU6-936P-201ENST00000384005 107 ntBASIC0.17□□□□□ -2.38
SNHG28P0DPA3 RNU6-520P-201ENST00000384717 104 ntBASIC0.17□□□□□ -2.38
SNHG28P0DPA3 RNU6-1262P-201ENST00000516217 96 ntBASIC0.17□□□□□ -2.38
SNHG28P0DPA3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
SNHG28P0DPA3 MIR7110-201ENST00000612638 86 ntBASIC0.17□□□□□ -2.38
SNHG28P0DPA3 MIR8087-201ENST00000612745 78 ntBASIC0.17□□□□□ -2.38
SNHG28P0DPA3 RNU6-1184P-201ENST00000384588 108 ntBASIC0.16□□□□□ -2.38
SNHG28P0DPA3 RNU6-141P-201ENST00000410499 105 ntBASIC0.16□□□□□ -2.38
SNHG28P0DPA3 RNU6-980P-201ENST00000516925 103 ntBASIC0.16□□□□□ -2.38
SNHG28P0DPA3 MIR4280-201ENST00000582178 76 ntBASIC0.16□□□□□ -2.38
SNHG28P0DPA3 MIR148A-201ENST00000362215 68 ntBASIC0.15□□□□□ -2.39
SNHG28P0DPA3 RNU6-929P-201ENST00000384429 107 ntBASIC0.15□□□□□ -2.39
SNHG28P0DPA3 MIR892B-201ENST00000401279 77 ntBASIC0.15□□□□□ -2.39
SNHG28P0DPA3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.15□□□□□ -2.39
SNHG28P0DPA3 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.15□□□□□ -2.39
SNHG28P0DPA3 snoR1.1-201ENST00000628177 80 ntBASIC0.15□□□□□ -2.39
SNHG28P0DPA3 SNORA40B-201ENST00000385573 128 ntBASIC0.14□□□□□ -2.39
SNHG28P0DPA3 RNU7-151P-201ENST00000516930 53 ntBASIC0.14□□□□□ -2.39
SNHG28P0DPA3 MIR610-201ENST00000385139 96 ntBASIC0.13□□□□□ -2.39
SNHG28P0DPA3 RNU6-1133P-201ENST00000410963 100 ntBASIC0.13□□□□□ -2.39
SNHG28P0DPA3 RNU6-1174P-201ENST00000517278 101 ntBASIC0.13□□□□□ -2.39
SNHG28P0DPA3 RNU6-974P-201ENST00000384099 108 ntBASIC0.12□□□□□ -2.39
SNHG28P0DPA3 RNU6-1267P-201ENST00000410747 107 ntBASIC0.12□□□□□ -2.39
SNHG28P0DPA3 RNU7-119P-201ENST00000459279 63 ntBASIC0.12□□□□□ -2.39
SNHG28P0DPA3 Y_RNA.722-201ENST00000517279 114 ntBASIC0.12□□□□□ -2.39
SNHG28P0DPA3 MIR2909-201ENST00000617113 69 ntBASIC0.12□□□□□ -2.39
SNHG28P0DPA3 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.12□□□□□ -2.39
SNHG28P0DPA3 RNU6-924P-201ENST00000362926 108 ntBASIC0.11□□□□□ -2.39
SNHG28P0DPA3 MIR124-2-201ENST00000385081 109 ntBASIC0.11□□□□□ -2.39
SNHG28P0DPA3 MIR1197-201ENST00000408818 88 ntBASIC0.11□□□□□ -2.39
SNHG28P0DPA3 MIR6854-201ENST00000614935 69 ntBASIC0.11□□□□□ -2.39
SNHG28P0DPA3 RNU6-696P-201ENST00000390834 107 ntBASIC0.1□□□□□ -2.39
SNHG28P0DPA3 SNORD57-201ENST00000448188 72 ntBASIC0.1□□□□□ -2.39
SNHG28P0DPA3 RNU7-159P-201ENST00000459284 62 ntBASIC0.1□□□□□ -2.39
SNHG28P0DPA3 SNORD38.3-201ENST00000516599 73 ntBASIC0.1□□□□□ -2.39
SNHG28P0DPA3 MIR4743-201ENST00000584576 69 ntBASIC0.1□□□□□ -2.39
SNHG28P0DPA3 AL590491.3-201ENST00000610731 82 ntBASIC0.1□□□□□ -2.39
SNHG28P0DPA3 SNORD19-201ENST00000391191 68 ntBASIC0.09□□□□□ -2.4
SNHG28P0DPA3 AL445193.1-201ENST00000441183 141 ntBASIC0.09□□□□□ -2.4
SNHG28P0DPA3 SNORA62.5-201ENST00000516634 120 ntBASIC0.09□□□□□ -2.4
SNHG28P0DPA3 AP002795.1-201ENST00000534879 84 ntBASIC0.09□□□□□ -2.4
SNHG28P0DPA3 SNORA62.4-201ENST00000365504 151 ntBASIC0.08□□□□□ -2.4
SNHG28P0DPA3 MIR125B1-201ENST00000385236 88 ntBASIC0.08□□□□□ -2.4
SNHG28P0DPA3 MIR4290-201ENST00000583807 95 ntBASIC0.08□□□□□ -2.4
SNHG28P0DPA3 MTRNR2L9-201ENST00000622562 75 ntBASIC0.08□□□□□ -2.4
SNHG28P0DPA3 Y_RNA.69-201ENST00000362885 109 ntBASIC0.07□□□□□ -2.4
SNHG28P0DPA3 RNU6-35P-201ENST00000384530 107 ntBASIC0.07□□□□□ -2.4
SNHG28P0DPA3 RNA5SP63-201ENST00000391225 112 ntBASIC0.07□□□□□ -2.4
SNHG28P0DPA3 MIR548X-201ENST00000580069 75 ntBASIC0.07□□□□□ -2.4
SNHG28P0DPA3 RNA5SP457-201ENST00000363657 124 ntBASIC0.06□□□□□ -2.4
SNHG28P0DPA3 Y_RNA.613-201ENST00000410726 97 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 355.1 ms