Protein–RNA interactions for Protein: P04264

KRT1, Keratin, type II cytoskeletal 1, humanhuman

Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1P04264 MIR760-201ENST00000390220 80 ntBASIC0.74□□□□□ -2.29
KRT1P04264 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.74□□□□□ -2.29
KRT1P04264 RN7SL660P-201ENST00000614852 299 ntBASIC0.74□□□□□ -2.29
KRT1P04264 U2.18-201ENST00000622185 84 ntBASIC0.74□□□□□ -2.29
KRT1P04264 RNU6-924P-201ENST00000362926 108 ntBASIC0.73□□□□□ -2.29
KRT1P04264 SNORD115-23-201ENST00000364461 82 ntBASIC0.73□□□□□ -2.29
KRT1P04264 RNU6-828P-201ENST00000364876 107 ntBASIC0.73□□□□□ -2.29
KRT1P04264 MIR876-201ENST00000401147 81 ntBASIC0.73□□□□□ -2.29
KRT1P04264 AC108676.2-201ENST00000605225 163 ntBASIC0.73□□□□□ -2.29
KRT1P04264 MIR6755-201ENST00000619993 66 ntBASIC0.73□□□□□ -2.29
KRT1P04264 snoR1.1-201ENST00000628177 80 ntBASIC0.73□□□□□ -2.29
KRT1P04264 RNA5SP128-201ENST00000365305 116 ntBASIC0.72□□□□□ -2.29
KRT1P04264 MIR106A-201ENST00000384870 81 ntBASIC0.72□□□□□ -2.29
KRT1P04264 RNU6-696P-201ENST00000390834 107 ntBASIC0.72□□□□□ -2.29
KRT1P04264 RNU6-1262P-201ENST00000516217 96 ntBASIC0.72□□□□□ -2.29
KRT1P04264 RNU4-54P-201ENST00000516428 129 ntBASIC0.72□□□□□ -2.29
KRT1P04264 RNU6-863P-201ENST00000515989 104 ntBASIC0.71□□□□□ -2.3
KRT1P04264 AP000676.1-201ENST00000533307 52 ntBASIC0.71□□□□□ -2.3
KRT1P04264 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.71□□□□□ -2.3
KRT1P04264 MIR4432-201ENST00000581823 84 ntBASIC0.71□□□□□ -2.3
KRT1P04264 AC010487.4-201ENST00000637027 61 ntBASIC0.71□□□□□ -2.3
KRT1P04264 SNORD114-23-201ENST00000363536 72 ntBASIC0.7□□□□□ -2.3
KRT1P04264 RNA5SP331-201ENST00000364986 107 ntBASIC0.7□□□□□ -2.3
KRT1P04264 MIR4714-201ENST00000580728 77 ntBASIC0.7□□□□□ -2.3
KRT1P04264 MIR3925-201ENST00000584674 77 ntBASIC0.7□□□□□ -2.3
KRT1P04264 MIR6513-201ENST00000621188 64 ntBASIC0.7□□□□□ -2.3
KRT1P04264 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
KRT1P04264 SNORD45.2-201ENST00000363552 72 ntBASIC0.69□□□□□ -2.3
KRT1P04264 RNU6-30P-201ENST00000384561 107 ntBASIC0.69□□□□□ -2.3
KRT1P04264 MIR125B1-201ENST00000385236 88 ntBASIC0.69□□□□□ -2.3
KRT1P04264 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
KRT1P04264 AL451105.1-201ENST00000450005 189 ntBASIC0.69□□□□□ -2.3
KRT1P04264 MIR548AL-201ENST00000578416 97 ntBASIC0.69□□□□□ -2.3
KRT1P04264 MIR508-201ENST00000384857 115 ntBASIC0.68□□□□□ -2.3
KRT1P04264 MIR936-201ENST00000401264 98 ntBASIC0.68□□□□□ -2.3
KRT1P04264 MIR8087-201ENST00000612745 78 ntBASIC0.68□□□□□ -2.3
KRT1P04264 RNA5SP98-201ENST00000363158 137 ntBASIC0.67□□□□□ -2.3
KRT1P04264 SNORA62.4-201ENST00000365504 151 ntBASIC0.67□□□□□ -2.3
KRT1P04264 VTRNA1-3-201ENST00000365645 89 ntBASIC0.67□□□□□ -2.3
KRT1P04264 SCARNA11.2-201ENST00000517183 154 ntBASIC0.67□□□□□ -2.3
KRT1P04264 MIR499B-201ENST00000636498 73 ntBASIC0.67□□□□□ -2.3
KRT1P04264 Y_RNA.698-201ENST00000516798 118 ntBASIC0.66□□□□□ -2.3
KRT1P04264 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
KRT1P04264 RNU6-945P-201ENST00000383947 107 ntBASIC0.65□□□□□ -2.31
KRT1P04264 RNU6-1267P-201ENST00000410747 107 ntBASIC0.65□□□□□ -2.31
KRT1P04264 SNORD57-201ENST00000448188 72 ntBASIC0.65□□□□□ -2.31
KRT1P04264 RNU7-129P-201ENST00000516128 62 ntBASIC0.65□□□□□ -2.31
KRT1P04264 U7.5-201ENST00000517224 61 ntBASIC0.65□□□□□ -2.31
KRT1P04264 MIR330-201ENST00000362196 94 ntBASIC0.64□□□□□ -2.31
KRT1P04264 RNU6-1133P-201ENST00000410963 100 ntBASIC0.64□□□□□ -2.31
KRT1P04264 SNORD63.1-201ENST00000516178 80 ntBASIC0.64□□□□□ -2.31
KRT1P04264 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.63□□□□□ -2.31
KRT1P04264 snoU13.19-201ENST00000459148 104 ntBASIC0.63□□□□□ -2.31
KRT1P04264 Y_RNA.139-201ENST00000363464 102 ntBASIC0.62□□□□□ -2.31
KRT1P04264 RNU6-1204P-201ENST00000363948 107 ntBASIC0.62□□□□□ -2.31
KRT1P04264 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
KRT1P04264 RNA5SP193-201ENST00000410353 107 ntBASIC0.62□□□□□ -2.31
KRT1P04264 RNU7-88P-201ENST00000458752 63 ntBASIC0.62□□□□□ -2.31
KRT1P04264 RNU6-1174P-201ENST00000517278 101 ntBASIC0.62□□□□□ -2.31
KRT1P04264 MIR4723-201ENST00000585070 81 ntBASIC0.62□□□□□ -2.31
KRT1P04264 MIR6888-201ENST00000621977 67 ntBASIC0.62□□□□□ -2.31
KRT1P04264 AL391099.1-201ENST00000624635 187 ntBASIC0.62□□□□□ -2.31
KRT1P04264 SNORD44.1-201ENST00000363202 61 ntBASIC0.61□□□□□ -2.31
KRT1P04264 RNU6-1250P-201ENST00000391218 107 ntBASIC0.61□□□□□ -2.31
KRT1P04264 MIR1197-201ENST00000408818 88 ntBASIC0.61□□□□□ -2.31
KRT1P04264 AC108740.1-201ENST00000498629 225 ntBASIC0.61□□□□□ -2.31
KRT1P04264 MIR4464-201ENST00000580818 92 ntBASIC0.61□□□□□ -2.31
KRT1P04264 AL445584.3-201ENST00000617173 78 ntBASIC0.61□□□□□ -2.31
KRT1P04264 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
KRT1P04264 RNU7-55P-201ENST00000459426 62 ntBASIC0.6□□□□□ -2.31
KRT1P04264 MIR4711-201ENST00000578274 70 ntBASIC0.6□□□□□ -2.31
KRT1P04264 RNU6-986P-201ENST00000363133 102 ntBASIC0.59□□□□□ -2.31
KRT1P04264 RNU6-973P-201ENST00000364690 107 ntBASIC0.59□□□□□ -2.31
KRT1P04264 Y_RNA.613-201ENST00000410726 97 ntBASIC0.59□□□□□ -2.31
KRT1P04264 Y_RNA.321-201ENST00000365149 102 ntBASIC0.58□□□□□ -2.32
KRT1P04264 RNU6-900P-201ENST00000384498 102 ntBASIC0.58□□□□□ -2.32
KRT1P04264 RNA5SP285-201ENST00000516619 119 ntBASIC0.58□□□□□ -2.32
KRT1P04264 MIR4636-201ENST00000582271 80 ntBASIC0.58□□□□□ -2.32
KRT1P04264 uc_338.36-201ENST00000622331 158 ntBASIC0.58□□□□□ -2.32
KRT1P04264 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.57□□□□□ -2.32
KRT1P04264 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.56□□□□□ -2.32
KRT1P04264 MIR1468-201ENST00000410600 86 ntBASIC0.56□□□□□ -2.32
KRT1P04264 AC104408.1-201ENST00000605241 170 ntBASIC0.56□□□□□ -2.32
KRT1P04264 MIR2909-201ENST00000617113 69 ntBASIC0.56□□□□□ -2.32
KRT1P04264 RNA5SP266-201ENST00000410273 108 ntBASIC0.55□□□□□ -2.32
KRT1P04264 AC096531.1-201ENST00000419107 107 ntBASIC0.55□□□□□ -2.32
KRT1P04264 SNORD63.2-201ENST00000516303 64 ntBASIC0.55□□□□□ -2.32
KRT1P04264 MIR3170-201ENST00000582699 77 ntBASIC0.55□□□□□ -2.32
KRT1P04264 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
KRT1P04264 RNU6-974P-201ENST00000384099 108 ntBASIC0.54□□□□□ -2.32
KRT1P04264 MIR29B1-201ENST00000385015 81 ntBASIC0.54□□□□□ -2.32
KRT1P04264 RNU6-1111P-201ENST00000391118 107 ntBASIC0.54□□□□□ -2.32
KRT1P04264 MIR409-201ENST00000362237 79 ntBASIC0.53□□□□□ -2.32
KRT1P04264 RNA5SP347-201ENST00000362445 119 ntBASIC0.53□□□□□ -2.32
KRT1P04264 RNU6-822P-201ENST00000362707 106 ntBASIC0.53□□□□□ -2.32
KRT1P04264 RNU6-742P-201ENST00000365289 107 ntBASIC0.53□□□□□ -2.32
KRT1P04264 RNU6-127P-201ENST00000390897 107 ntBASIC0.53□□□□□ -2.32
KRT1P04264 RNU6-721P-201ENST00000410155 105 ntBASIC0.53□□□□□ -2.32
KRT1P04264 MTRNR2L9-201ENST00000622562 75 ntBASIC0.53□□□□□ -2.32
KRT1P04264 RNA5SP499-201ENST00000363982 119 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms