Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 Y_RNA.282-201ENST00000364793 102 ntBASIC0.47□□□□□ -2.33
COL3A1P02461 MIR3925-201ENST00000584674 77 ntBASIC0.47□□□□□ -2.33
COL3A1P02461 RN7SL660P-201ENST00000614852 299 ntBASIC0.47□□□□□ -2.33
COL3A1P02461 MIR7978-201ENST00000636158 59 ntBASIC0.47□□□□□ -2.33
COL3A1P02461 MIR499B-201ENST00000636498 73 ntBASIC0.47□□□□□ -2.33
COL3A1P02461 SNORD113-4-201ENST00000364802 75 ntBASIC0.46□□□□□ -2.34
COL3A1P02461 MIRLET7B-201ENST00000385140 83 ntBASIC0.46□□□□□ -2.34
COL3A1P02461 SNORA49-201ENST00000386157 136 ntBASIC0.46□□□□□ -2.34
COL3A1P02461 RNU6-1246P-201ENST00000391064 107 ntBASIC0.46□□□□□ -2.34
COL3A1P02461 RNA5SP266-201ENST00000410273 108 ntBASIC0.46□□□□□ -2.34
COL3A1P02461 RNU6-782P-201ENST00000516852 104 ntBASIC0.46□□□□□ -2.34
COL3A1P02461 MIR4802-201ENST00000581881 80 ntBASIC0.46□□□□□ -2.34
COL3A1P02461 MIR1468-201ENST00000410600 86 ntBASIC0.45□□□□□ -2.34
COL3A1P02461 RNA5SP67-201ENST00000516422 131 ntBASIC0.45□□□□□ -2.34
COL3A1P02461 MIR106A-201ENST00000384870 81 ntBASIC0.44□□□□□ -2.34
COL3A1P02461 MIR876-201ENST00000401147 81 ntBASIC0.44□□□□□ -2.34
COL3A1P02461 SCARNA11.2-201ENST00000517183 154 ntBASIC0.44□□□□□ -2.34
COL3A1P02461 RNU6-1312P-201ENST00000362425 108 ntBASIC0.43□□□□□ -2.34
COL3A1P02461 RNU6-936P-201ENST00000384005 107 ntBASIC0.43□□□□□ -2.34
COL3A1P02461 Y_RNA.457-201ENST00000384237 111 ntBASIC0.43□□□□□ -2.34
COL3A1P02461 RNU6-246P-201ENST00000384702 107 ntBASIC0.43□□□□□ -2.34
COL3A1P02461 RNU7-129P-201ENST00000516128 62 ntBASIC0.43□□□□□ -2.34
COL3A1P02461 RNU6-758P-201ENST00000516292 89 ntBASIC0.43□□□□□ -2.34
COL3A1P02461 RNU6-231P-201ENST00000517122 103 ntBASIC0.43□□□□□ -2.34
COL3A1P02461 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.43□□□□□ -2.34
COL3A1P02461 SNORD116.2-201ENST00000391251 93 ntBASIC0.42□□□□□ -2.34
COL3A1P02461 MIR7110-201ENST00000612638 86 ntBASIC0.42□□□□□ -2.34
COL3A1P02461 RNA5SP368-201ENST00000364298 116 ntBASIC0.41□□□□□ -2.34
COL3A1P02461 RNU6-945P-201ENST00000383947 107 ntBASIC0.41□□□□□ -2.34
COL3A1P02461 RNU6-1184P-201ENST00000384588 108 ntBASIC0.41□□□□□ -2.34
COL3A1P02461 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.41□□□□□ -2.34
COL3A1P02461 AP000676.1-201ENST00000533307 52 ntBASIC0.41□□□□□ -2.34
COL3A1P02461 snoR1.1-201ENST00000628177 80 ntBASIC0.41□□□□□ -2.34
COL3A1P02461 RNA5SP98-201ENST00000363158 137 ntBASIC0.41□□□□□ -2.34
COL3A1P02461 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.41□□□□□ -2.34
COL3A1P02461 uc_338.17-201ENST00000619633 179 ntBASIC0.41□□□□□ -2.34
COL3A1P02461 IGLVI-20-201ENST00000519296 130 ntBASIC0.4□□□□□ -2.35
COL3A1P02461 AL353803.5-201ENST00000599815 141 ntBASIC0.39□□□□□ -2.35
COL3A1P02461 MIR103A1-201ENST00000362165 78 ntBASIC0.38□□□□□ -2.35
COL3A1P02461 Y_RNA.109-201ENST00000363215 102 ntBASIC0.38□□□□□ -2.35
COL3A1P02461 RNU6-458P-201ENST00000384179 107 ntBASIC0.38□□□□□ -2.35
COL3A1P02461 U6.58-201ENST00000613107 107 ntBASIC0.38□□□□□ -2.35
COL3A1P02461 AC108740.1-201ENST00000498629 225 ntBASIC0.37□□□□□ -2.35
COL3A1P02461 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.37□□□□□ -2.35
COL3A1P02461 MIR548AG1-201ENST00000579932 66 ntBASIC0.37□□□□□ -2.35
COL3A1P02461 MIR5190-201ENST00000581537 80 ntBASIC0.37□□□□□ -2.35
COL3A1P02461 MIR4432-201ENST00000581823 84 ntBASIC0.37□□□□□ -2.35
COL3A1P02461 Y_RNA.185-201ENST00000363894 100 ntBASIC0.36□□□□□ -2.35
COL3A1P02461 SNX3P1X-201ENST00000414887 175 ntBASIC0.36□□□□□ -2.35
COL3A1P02461 SNORA68.3-201ENST00000515906 83 ntBASIC0.36□□□□□ -2.35
COL3A1P02461 AC090625.1-201ENST00000357130 210 ntBASIC0.35□□□□□ -2.35
COL3A1P02461 RNU6-172P-201ENST00000411000 93 ntBASIC0.35□□□□□ -2.35
COL3A1P02461 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.35□□□□□ -2.35
COL3A1P02461 SNORD57-201ENST00000448188 72 ntBASIC0.35□□□□□ -2.35
COL3A1P02461 MIRLET7D-201ENST00000362263 87 ntBASIC0.35□□□□□ -2.35
COL3A1P02461 SNORD115-23-201ENST00000364461 82 ntBASIC0.35□□□□□ -2.35
COL3A1P02461 RNU6-815P-201ENST00000384080 113 ntBASIC0.35□□□□□ -2.35
COL3A1P02461 SNORA40B-201ENST00000385573 128 ntBASIC0.35□□□□□ -2.35
COL3A1P02461 RNU6-127P-201ENST00000390897 107 ntBASIC0.35□□□□□ -2.35
COL3A1P02461 MIR892B-201ENST00000401279 77 ntBASIC0.35□□□□□ -2.35
COL3A1P02461 SNORD1B-201ENST00000363091 84 ntBASIC0.34□□□□□ -2.36
COL3A1P02461 RNU6-810P-201ENST00000364001 107 ntBASIC0.34□□□□□ -2.36
COL3A1P02461 SNORA62.4-201ENST00000365504 151 ntBASIC0.34□□□□□ -2.36
COL3A1P02461 RNU6-1133P-201ENST00000410963 100 ntBASIC0.34□□□□□ -2.36
COL3A1P02461 SNORA40.16-201ENST00000517238 121 ntBASIC0.34□□□□□ -2.36
COL3A1P02461 AC069113.3-201ENST00000521019 150 ntBASIC0.34□□□□□ -2.36
COL3A1P02461 AC108676.2-201ENST00000605225 163 ntBASIC0.34□□□□□ -2.36
COL3A1P02461 MIR643-201ENST00000385267 97 ntBASIC0.33□□□□□ -2.36
COL3A1P02461 CR383656.4-201ENST00000546909 122 ntBASIC0.33□□□□□ -2.36
COL3A1P02461 MIR548X-201ENST00000580069 75 ntBASIC0.33□□□□□ -2.36
COL3A1P02461 AL391099.1-201ENST00000624635 187 ntBASIC0.33□□□□□ -2.36
COL3A1P02461 RNU4-33P-201ENST00000364316 85 ntBASIC0.32□□□□□ -2.36
COL3A1P02461 Y_RNA.379-201ENST00000365653 102 ntBASIC0.32□□□□□ -2.36
COL3A1P02461 RNU6-900P-201ENST00000384498 102 ntBASIC0.32□□□□□ -2.36
COL3A1P02461 AC104692.1-201ENST00000472406 90 ntBASIC0.32□□□□□ -2.36
COL3A1P02461 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.32□□□□□ -2.36
COL3A1P02461 RNU6-753P-201ENST00000363926 107 ntBASIC0.31□□□□□ -2.36
COL3A1P02461 RNU7-55P-201ENST00000459426 62 ntBASIC0.31□□□□□ -2.36
COL3A1P02461 RNU6-180P-201ENST00000516697 61 ntBASIC0.31□□□□□ -2.36
COL3A1P02461 MIR6514-201ENST00000622549 70 ntBASIC0.31□□□□□ -2.36
COL3A1P02461 RNU6-973P-201ENST00000364690 107 ntBASIC0.3□□□□□ -2.36
COL3A1P02461 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
COL3A1P02461 MIR604-201ENST00000384880 94 ntBASIC0.3□□□□□ -2.36
COL3A1P02461 Y_RNA.610-201ENST00000410681 103 ntBASIC0.3□□□□□ -2.36
COL3A1P02461 RNU6-1262P-201ENST00000516217 96 ntBASIC0.3□□□□□ -2.36
COL3A1P02461 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.3□□□□□ -2.36
COL3A1P02461 MIR4315-1-201ENST00000636800 73 ntBASIC0.3□□□□□ -2.36
COL3A1P02461 MIR4315-2-201ENST00000640925 73 ntBASIC0.3□□□□□ -2.36
COL3A1P02461 RNU6-598P-201ENST00000364017 105 ntBASIC0.29□□□□□ -2.36
COL3A1P02461 MIR548AA1-201ENST00000384971 97 ntBASIC0.29□□□□□ -2.36
COL3A1P02461 MIR610-201ENST00000385139 96 ntBASIC0.29□□□□□ -2.36
COL3A1P02461 RNA5SP163-201ENST00000410304 99 ntBASIC0.29□□□□□ -2.36
COL3A1P02461 RNU7-160P-201ENST00000516660 62 ntBASIC0.29□□□□□ -2.36
COL3A1P02461 RNU6-980P-201ENST00000516925 103 ntBASIC0.29□□□□□ -2.36
COL3A1P02461 uc_338.36-201ENST00000622331 158 ntBASIC0.29□□□□□ -2.36
COL3A1P02461 RNU6-696P-201ENST00000390834 107 ntBASIC0.29□□□□□ -2.36
COL3A1P02461 RNU7-151P-201ENST00000516930 53 ntBASIC0.29□□□□□ -2.36
COL3A1P02461 MIR4493-201ENST00000584016 73 ntBASIC0.29□□□□□ -2.36
COL3A1P02461 RNU6-924P-201ENST00000362926 108 ntBASIC0.28□□□□□ -2.37
COL3A1P02461 SNORD95.1-201ENST00000364099 68 ntBASIC0.28□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 194.1 ms