Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MIR548C-201ENST00000384815 97 ntBASIC-0.34□□□□□ -2.46
LDB2O43679 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.34□□□□□ -2.46
LDB2O43679 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.34□□□□□ -2.46
LDB2O43679 MIR5704-201ENST00000584029 77 ntBASIC-0.34□□□□□ -2.46
LDB2O43679 MIR6854-201ENST00000614935 69 ntBASIC-0.34□□□□□ -2.46
LDB2O43679 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.35□□□□□ -2.47
LDB2O43679 MIR519A2-201ENST00000384990 87 ntBASIC-0.35□□□□□ -2.47
LDB2O43679 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.35□□□□□ -2.47
LDB2O43679 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.35□□□□□ -2.47
LDB2O43679 MIR6851-201ENST00000617060 67 ntBASIC-0.35□□□□□ -2.47
LDB2O43679 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.35□□□□□ -2.47
LDB2O43679 SNORD115-31-201ENST00000365318 82 ntBASIC-0.36□□□□□ -2.47
LDB2O43679 RNA5SP215-201ENST00000363440 122 ntBASIC-0.38□□□□□ -2.47
LDB2O43679 SNORD114-11-201ENST00000363738 75 ntBASIC-0.38□□□□□ -2.47
LDB2O43679 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.38□□□□□ -2.47
LDB2O43679 AC114755.3-201ENST00000481111 251 ntBASIC-0.38□□□□□ -2.47
LDB2O43679 RNU7-174P-201ENST00000516248 59 ntBASIC-0.38□□□□□ -2.47
LDB2O43679 AP001180.6-201ENST00000584918 159 ntBASIC-0.38□□□□□ -2.47
LDB2O43679 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.39□□□□□ -2.47
LDB2O43679 MIR517B-201ENST00000385102 67 ntBASIC-0.39□□□□□ -2.47
LDB2O43679 RNU6-634P-201ENST00000459134 106 ntBASIC-0.39□□□□□ -2.47
LDB2O43679 SNORD38.3-201ENST00000516599 73 ntBASIC-0.39□□□□□ -2.47
LDB2O43679 MIR4662A-201ENST00000637499 67 ntBASIC-0.39□□□□□ -2.47
LDB2O43679 SNORD14C-201ENST00000365382 88 ntBASIC-0.4□□□□□ -2.47
LDB2O43679 RNU6-320P-201ENST00000516511 106 ntBASIC-0.4□□□□□ -2.47
LDB2O43679 MIR8068-201ENST00000618032 68 ntBASIC-0.4□□□□□ -2.47
LDB2O43679 SNORD116-24-201ENST00000384549 92 ntBASIC-0.41□□□□□ -2.48
LDB2O43679 MIR889-201ENST00000401280 79 ntBASIC-0.41□□□□□ -2.48
LDB2O43679 MIR1265-201ENST00000408444 86 ntBASIC-0.41□□□□□ -2.48
LDB2O43679 RNU6-523P-201ENST00000516304 54 ntBASIC-0.41□□□□□ -2.48
LDB2O43679 MIR4464-201ENST00000580818 92 ntBASIC-0.41□□□□□ -2.48
LDB2O43679 MIR4645-201ENST00000583158 77 ntBASIC-0.41□□□□□ -2.48
LDB2O43679 MIR204-201ENST00000385200 110 ntBASIC-0.42□□□□□ -2.48
LDB2O43679 SNORA13-201ENST00000458790 133 ntBASIC-0.42□□□□□ -2.48
LDB2O43679 RNU6-871P-201ENST00000516122 100 ntBASIC-0.42□□□□□ -2.48
LDB2O43679 MIR4493-201ENST00000584016 73 ntBASIC-0.42□□□□□ -2.48
LDB2O43679 RNU6-698P-201ENST00000363523 107 ntBASIC-0.43□□□□□ -2.48
LDB2O43679 RNU6-776P-201ENST00000364403 104 ntBASIC-0.43□□□□□ -2.48
LDB2O43679 RNU6-34P-201ENST00000364874 107 ntBASIC-0.43□□□□□ -2.48
LDB2O43679 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.43□□□□□ -2.48
LDB2O43679 SNORD126-201ENST00000459475 77 ntBASIC-0.43□□□□□ -2.48
LDB2O43679 MIR6086-201ENST00000638065 55 ntBASIC-0.43□□□□□ -2.48
LDB2O43679 SNORD114-28-201ENST00000363610 72 ntBASIC-0.44□□□□□ -2.48
LDB2O43679 SNORD74.6-201ENST00000364796 70 ntBASIC-0.44□□□□□ -2.48
LDB2O43679 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.44□□□□□ -2.48
LDB2O43679 MIR518B-201ENST00000385127 83 ntBASIC-0.44□□□□□ -2.48
LDB2O43679 RNA5SP476-201ENST00000516613 103 ntBASIC-0.44□□□□□ -2.48
LDB2O43679 AL445584.3-201ENST00000617173 78 ntBASIC-0.44□□□□□ -2.48
LDB2O43679 MIR6888-201ENST00000621977 67 ntBASIC-0.44□□□□□ -2.48
LDB2O43679 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.45□□□□□ -2.48
LDB2O43679 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.45□□□□□ -2.48
LDB2O43679 MIR548V-201ENST00000584165 80 ntBASIC-0.45□□□□□ -2.48
LDB2O43679 AC108676.2-201ENST00000605225 163 ntBASIC-0.45□□□□□ -2.48
LDB2O43679 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.46□□□□□ -2.48
LDB2O43679 RNU6-540P-201ENST00000384622 101 ntBASIC-0.46□□□□□ -2.48
LDB2O43679 RNA5SP169-201ENST00000517268 117 ntBASIC-0.46□□□□□ -2.48
LDB2O43679 MIR196A2-201ENST00000385189 110 ntBASIC-0.47□□□□□ -2.48
LDB2O43679 RNU6-663P-201ENST00000391105 106 ntBASIC-0.47□□□□□ -2.48
LDB2O43679 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.47□□□□□ -2.48
LDB2O43679 RNA5SP275-201ENST00000363936 118 ntBASIC-0.48□□□□□ -2.49
LDB2O43679 U4.4-201ENST00000620626 117 ntBASIC-0.48□□□□□ -2.49
LDB2O43679 MIR101-1-201ENST00000362265 75 ntBASIC-0.49□□□□□ -2.49
LDB2O43679 MIR124-2-201ENST00000385081 109 ntBASIC-0.49□□□□□ -2.49
LDB2O43679 SNORD22.1-201ENST00000516331 125 ntBASIC-0.49□□□□□ -2.49
LDB2O43679 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.5□□□□□ -2.49
LDB2O43679 RNU6-924P-201ENST00000362926 108 ntBASIC-0.5□□□□□ -2.49
LDB2O43679 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.5□□□□□ -2.49
LDB2O43679 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.5□□□□□ -2.49
LDB2O43679 SNORD113-2-201ENST00000391082 72 ntBASIC-0.5□□□□□ -2.49
LDB2O43679 RNU6-284P-201ENST00000411105 106 ntBASIC-0.5□□□□□ -2.49
LDB2O43679 AC021146.6-201ENST00000514659 117 ntBASIC-0.5□□□□□ -2.49
LDB2O43679 RNU6-638P-201ENST00000516582 104 ntBASIC-0.5□□□□□ -2.49
LDB2O43679 MIR3179-1-201ENST00000578940 84 ntBASIC-0.5□□□□□ -2.49
LDB2O43679 MIR3179-2-201ENST00000579107 84 ntBASIC-0.5□□□□□ -2.49
LDB2O43679 MIR3179-3-201ENST00000579566 84 ntBASIC-0.5□□□□□ -2.49
LDB2O43679 MIR8064-201ENST00000612863 90 ntBASIC-0.5□□□□□ -2.49
LDB2O43679 MIR3179-4-201ENST00000617599 84 ntBASIC-0.5□□□□□ -2.49
LDB2O43679 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.51□□□□□ -2.49
LDB2O43679 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.51□□□□□ -2.49
LDB2O43679 MIR630-201ENST00000384957 97 ntBASIC-0.51□□□□□ -2.49
LDB2O43679 SNORD30.1-201ENST00000391309 70 ntBASIC-0.51□□□□□ -2.49
LDB2O43679 MIR548AG1-201ENST00000579932 66 ntBASIC-0.51□□□□□ -2.49
LDB2O43679 MIR604-201ENST00000384880 94 ntBASIC-0.52□□□□□ -2.49
LDB2O43679 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.52□□□□□ -2.49
LDB2O43679 SNORD75.1-201ENST00000408373 60 ntBASIC-0.52□□□□□ -2.49
LDB2O43679 RNU6-758P-201ENST00000516292 89 ntBASIC-0.52□□□□□ -2.49
LDB2O43679 RNU6-542P-201ENST00000516405 103 ntBASIC-0.52□□□□□ -2.49
LDB2O43679 SNORD114-14-201ENST00000362723 75 ntBASIC-0.53□□□□□ -2.49
LDB2O43679 HAR1A.1-201ENST00000459583 118 ntBASIC-0.53□□□□□ -2.49
LDB2O43679 SNORD18.2-201ENST00000459604 70 ntBASIC-0.53□□□□□ -2.49
LDB2O43679 RNU6-649P-201ENST00000384463 107 ntBASIC-0.54□□□□□ -2.5
LDB2O43679 MIR527-201ENST00000385244 85 ntBASIC-0.54□□□□□ -2.5
LDB2O43679 RNU6-630P-201ENST00000391258 106 ntBASIC-0.54□□□□□ -2.5
LDB2O43679 Z95118.1-201ENST00000421372 247 ntBASIC-0.54□□□□□ -2.5
LDB2O43679 RNU6-539P-201ENST00000516665 103 ntBASIC-0.54□□□□□ -2.5
LDB2O43679 MIR429-201ENST00000362106 83 ntBASIC-0.55□□□□□ -2.5
LDB2O43679 SNORA25.4-201ENST00000363666 124 ntBASIC-0.55□□□□□ -2.5
LDB2O43679 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.55□□□□□ -2.5
LDB2O43679 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.55□□□□□ -2.5
LDB2O43679 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms