Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 RNU6-900P-201ENST00000384498 102 ntBASIC0.08□□□□□ -2.4
HOXA3O43365 RNU6-455P-201ENST00000384681 107 ntBASIC0.08□□□□□ -2.4
HOXA3O43365 RNU6-302P-201ENST00000365249 107 ntBASIC0.07□□□□□ -2.4
HOXA3O43365 RNU7-55P-201ENST00000459426 62 ntBASIC0.07□□□□□ -2.4
HOXA3O43365 MIR4511-201ENST00000582784 87 ntBASIC0.06□□□□□ -2.4
HOXA3O43365 uc_338.36-201ENST00000622331 158 ntBASIC0.06□□□□□ -2.4
HOXA3O43365 snoR1.1-201ENST00000628177 80 ntBASIC0.06□□□□□ -2.4
HOXA3O43365 SNORD115-23-201ENST00000364461 82 ntBASIC0.05□□□□□ -2.4
HOXA3O43365 Y_RNA.246-201ENST00000364495 108 ntBASIC0.05□□□□□ -2.4
HOXA3O43365 MIR9-2-201ENST00000384838 87 ntBASIC0.05□□□□□ -2.4
HOXA3O43365 AC103706.3-201ENST00000636297 85 ntBASIC0.05□□□□□ -2.4
HOXA3O43365 RNU6-471P-201ENST00000383944 106 ntBASIC0.04□□□□□ -2.4
HOXA3O43365 SNORD113-2-201ENST00000391082 72 ntBASIC0.04□□□□□ -2.4
HOXA3O43365 AC244250.2-201ENST00000418731 148 ntBASIC0.04□□□□□ -2.4
HOXA3O43365 MIR4432-201ENST00000581823 84 ntBASIC0.04□□□□□ -2.4
HOXA3O43365 MIR4290-201ENST00000583807 95 ntBASIC0.04□□□□□ -2.4
HOXA3O43365 U4.4-201ENST00000620626 117 ntBASIC0.04□□□□□ -2.4
HOXA3O43365 MIR655-201ENST00000362159 97 ntBASIC0.03□□□□□ -2.4
HOXA3O43365 RNU6-1133P-201ENST00000410963 100 ntBASIC0.03□□□□□ -2.4
HOXA3O43365 RNU7-154P-201ENST00000516194 62 ntBASIC0.03□□□□□ -2.4
HOXA3O43365 AL353803.5-201ENST00000599815 141 ntBASIC0.03□□□□□ -2.4
HOXA3O43365 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.03□□□□□ -2.4
HOXA3O43365 Y_RNA.325-201ENST00000365171 122 ntBASIC0.02□□□□□ -2.41
HOXA3O43365 RNU6-46P-201ENST00000383860 107 ntBASIC0.02□□□□□ -2.41
HOXA3O43365 SCARNA21.1-201ENST00000515996 128 ntBASIC0.02□□□□□ -2.41
HOXA3O43365 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
HOXA3O43365 MIR4802-201ENST00000581881 80 ntBASIC0.02□□□□□ -2.41
HOXA3O43365 AL391099.1-201ENST00000624635 187 ntBASIC0.02□□□□□ -2.41
HOXA3O43365 RNU6-973P-201ENST00000364690 107 ntBASIC0.01□□□□□ -2.41
HOXA3O43365 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
HOXA3O43365 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
HOXA3O43365 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.01□□□□□ -2.41
HOXA3O43365 snoU13.19-201ENST00000459148 104 ntBASIC0.01□□□□□ -2.41
HOXA3O43365 AC125388.1-201ENST00000459631 156 ntBASIC0.01□□□□□ -2.41
HOXA3O43365 IGLVI-20-201ENST00000519296 130 ntBASIC0.01□□□□□ -2.41
HOXA3O43365 Y_RNA.74-201ENST00000362911 99 ntBASIC0□□□□□ -2.41
HOXA3O43365 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
HOXA3O43365 Y_RNA.340-201ENST00000365330 92 ntBASIC0□□□□□ -2.41
HOXA3O43365 RNU6-788P-201ENST00000390967 104 ntBASIC0□□□□□ -2.41
HOXA3O43365 RNU6-1246P-201ENST00000391064 107 ntBASIC0□□□□□ -2.41
HOXA3O43365 SNORD114-31-201ENST00000363219 75 ntBASIC-0.01□□□□□ -2.41
HOXA3O43365 Z95118.1-201ENST00000421372 247 ntBASIC-0.01□□□□□ -2.41
HOXA3O43365 AC104692.1-201ENST00000472406 90 ntBASIC-0.01□□□□□ -2.41
HOXA3O43365 MIR548AG1-201ENST00000579932 66 ntBASIC-0.01□□□□□ -2.41
HOXA3O43365 MIR5704-201ENST00000584029 77 ntBASIC-0.01□□□□□ -2.41
HOXA3O43365 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.01□□□□□ -2.41
HOXA3O43365 RNU6-92P-201ENST00000605893 104 ntBASIC-0.02□□□□□ -2.41
HOXA3O43365 SNORD49B-201ENST00000365172 72 ntBASIC-0.03□□□□□ -2.41
HOXA3O43365 RNU6-901P-201ENST00000384593 106 ntBASIC-0.03□□□□□ -2.41
HOXA3O43365 SNORD56B-201ENST00000384713 71 ntBASIC-0.03□□□□□ -2.41
HOXA3O43365 AC096531.1-201ENST00000419107 107 ntBASIC-0.03□□□□□ -2.41
HOXA3O43365 SNORA25.5-201ENST00000363782 126 ntBASIC-0.04□□□□□ -2.42
HOXA3O43365 RNU6-30P-201ENST00000384561 107 ntBASIC-0.04□□□□□ -2.42
HOXA3O43365 AL445193.1-201ENST00000441183 141 ntBASIC-0.04□□□□□ -2.42
HOXA3O43365 RNU6-758P-201ENST00000516292 89 ntBASIC-0.04□□□□□ -2.42
HOXA3O43365 MIR8068-201ENST00000618032 68 ntBASIC-0.04□□□□□ -2.42
HOXA3O43365 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
HOXA3O43365 AL627230.5-201ENST00000619807 58 ntBASIC-0.05□□□□□ -2.42
HOXA3O43365 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.06□□□□□ -2.42
HOXA3O43365 SNORA62.4-201ENST00000365504 151 ntBASIC-0.06□□□□□ -2.42
HOXA3O43365 MIR527-201ENST00000385244 85 ntBASIC-0.06□□□□□ -2.42
HOXA3O43365 AC110620.1-201ENST00000416042 228 ntBASIC-0.06□□□□□ -2.42
HOXA3O43365 AL590491.3-201ENST00000610731 82 ntBASIC-0.06□□□□□ -2.42
HOXA3O43365 MIR1295B-201ENST00000636144 60 ntBASIC-0.06□□□□□ -2.42
HOXA3O43365 RNA5SP368-201ENST00000364298 116 ntBASIC-0.07□□□□□ -2.42
HOXA3O43365 RNA5SP192-201ENST00000364404 120 ntBASIC-0.07□□□□□ -2.42
HOXA3O43365 SNORD114-12-201ENST00000365400 75 ntBASIC-0.07□□□□□ -2.42
HOXA3O43365 RNA5SP25-201ENST00000410815 110 ntBASIC-0.07□□□□□ -2.42
HOXA3O43365 MIR4280-201ENST00000582178 76 ntBASIC-0.07□□□□□ -2.42
HOXA3O43365 SNORA18.1-201ENST00000363418 128 ntBASIC-0.08□□□□□ -2.42
HOXA3O43365 MIR4464-201ENST00000580818 92 ntBASIC-0.08□□□□□ -2.42
HOXA3O43365 AP001180.6-201ENST00000584918 159 ntBASIC-0.08□□□□□ -2.42
HOXA3O43365 SNORA41B-201ENST00000384785 128 ntBASIC-0.09□□□□□ -2.42
HOXA3O43365 AC114755.3-201ENST00000481111 251 ntBASIC-0.09□□□□□ -2.42
HOXA3O43365 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.09□□□□□ -2.42
HOXA3O43365 AC108676.2-201ENST00000605225 163 ntBASIC-0.09□□□□□ -2.42
HOXA3O43365 MIR6854-201ENST00000614935 69 ntBASIC-0.09□□□□□ -2.42
HOXA3O43365 SNORD114-11-201ENST00000363738 75 ntBASIC-0.1□□□□□ -2.43
HOXA3O43365 RNA5SP169-201ENST00000517268 117 ntBASIC-0.1□□□□□ -2.43
HOXA3O43365 MIR4493-201ENST00000584016 73 ntBASIC-0.1□□□□□ -2.43
HOXA3O43365 MIR6888-201ENST00000621977 67 ntBASIC-0.1□□□□□ -2.43
HOXA3O43365 SNORD60.1-201ENST00000362451 73 ntBASIC-0.11□□□□□ -2.43
HOXA3O43365 SNORA32.1-201ENST00000364514 115 ntBASIC-0.11□□□□□ -2.43
HOXA3O43365 SNORD114-15-201ENST00000364687 72 ntBASIC-0.11□□□□□ -2.43
HOXA3O43365 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.11□□□□□ -2.43
HOXA3O43365 MIR604-201ENST00000384880 94 ntBASIC-0.11□□□□□ -2.43
HOXA3O43365 MIR214-201ENST00000385214 110 ntBASIC-0.11□□□□□ -2.43
HOXA3O43365 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
HOXA3O43365 SNORD38.3-201ENST00000516599 73 ntBASIC-0.11□□□□□ -2.43
HOXA3O43365 RNU6-940P-201ENST00000363433 104 ntBASIC-0.12□□□□□ -2.43
HOXA3O43365 MIR4645-201ENST00000583158 77 ntBASIC-0.12□□□□□ -2.43
HOXA3O43365 MIR4263-201ENST00000584745 83 ntBASIC-0.12□□□□□ -2.43
HOXA3O43365 AL445584.3-201ENST00000617173 78 ntBASIC-0.12□□□□□ -2.43
HOXA3O43365 SNORD4A-201ENST00000459174 72 ntBASIC-0.13□□□□□ -2.43
HOXA3O43365 SNORD116-16-201ENST00000384533 92 ntBASIC-0.14□□□□□ -2.43
HOXA3O43365 RNA5SP300-201ENST00000391197 107 ntBASIC-0.14□□□□□ -2.43
HOXA3O43365 RNU6-122P-201ENST00000516818 107 ntBASIC-0.14□□□□□ -2.43
HOXA3O43365 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.15□□□□□ -2.43
HOXA3O43365 RNU6-669P-201ENST00000365575 107 ntBASIC-0.15□□□□□ -2.43
HOXA3O43365 RNU6-458P-201ENST00000384179 107 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms