Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.57□□□□□ -2.32
SOX1O00570 Y_RNA.282-201ENST00000364793 102 ntBASIC0.56□□□□□ -2.32
SOX1O00570 RNU6-815P-201ENST00000384080 113 ntBASIC0.55□□□□□ -2.32
SOX1O00570 RNU6-127P-201ENST00000390897 107 ntBASIC0.55□□□□□ -2.32
SOX1O00570 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.55□□□□□ -2.32
SOX1O00570 MIR6718-201ENST00000616153 80 ntBASIC0.55□□□□□ -2.32
SOX1O00570 SNORD116-16-201ENST00000384533 92 ntBASIC0.54□□□□□ -2.32
SOX1O00570 RNU6-520P-201ENST00000384717 104 ntBASIC0.54□□□□□ -2.32
SOX1O00570 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
SOX1O00570 AP000676.1-201ENST00000533307 52 ntBASIC0.54□□□□□ -2.32
SOX1O00570 AC090625.1-201ENST00000357130 210 ntBASIC0.53□□□□□ -2.32
SOX1O00570 RNA5SP98-201ENST00000363158 137 ntBASIC0.53□□□□□ -2.32
SOX1O00570 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
SOX1O00570 MIR409-201ENST00000362237 79 ntBASIC0.52□□□□□ -2.33
SOX1O00570 Z95118.1-201ENST00000421372 247 ntBASIC0.52□□□□□ -2.33
SOX1O00570 AC108740.1-201ENST00000498629 225 ntBASIC0.52□□□□□ -2.33
SOX1O00570 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.52□□□□□ -2.33
SOX1O00570 AC069113.3-201ENST00000521019 150 ntBASIC0.52□□□□□ -2.33
SOX1O00570 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.52□□□□□ -2.33
SOX1O00570 RNU7-119P-201ENST00000459279 63 ntBASIC0.51□□□□□ -2.33
SOX1O00570 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.49□□□□□ -2.33
SOX1O00570 MIR429-201ENST00000362106 83 ntBASIC0.48□□□□□ -2.33
SOX1O00570 RNU6-141P-201ENST00000410499 105 ntBASIC0.48□□□□□ -2.33
SOX1O00570 MIR548AG1-201ENST00000579932 66 ntBASIC0.48□□□□□ -2.33
SOX1O00570 AL353803.5-201ENST00000599815 141 ntBASIC0.48□□□□□ -2.33
SOX1O00570 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.47□□□□□ -2.33
SOX1O00570 SNORD115-23-201ENST00000364461 82 ntBASIC0.47□□□□□ -2.33
SOX1O00570 RNU6-1327P-201ENST00000365302 105 ntBASIC0.47□□□□□ -2.33
SOX1O00570 RNU6-246P-201ENST00000384702 107 ntBASIC0.47□□□□□ -2.33
SOX1O00570 MIR643-201ENST00000385267 97 ntBASIC0.47□□□□□ -2.33
SOX1O00570 snoR1.1-201ENST00000628177 80 ntBASIC0.47□□□□□ -2.33
SOX1O00570 MIR892B-201ENST00000401279 77 ntBASIC0.46□□□□□ -2.34
SOX1O00570 RNU6-231P-201ENST00000517122 103 ntBASIC0.46□□□□□ -2.34
SOX1O00570 MIR5190-201ENST00000581537 80 ntBASIC0.46□□□□□ -2.34
SOX1O00570 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
SOX1O00570 SNORD114-15-201ENST00000364687 72 ntBASIC0.45□□□□□ -2.34
SOX1O00570 RNU6-758P-201ENST00000516292 89 ntBASIC0.45□□□□□ -2.34
SOX1O00570 CR383656.4-201ENST00000546909 122 ntBASIC0.45□□□□□ -2.34
SOX1O00570 MIR4432-201ENST00000581823 84 ntBASIC0.45□□□□□ -2.34
SOX1O00570 MIR6514-201ENST00000622549 70 ntBASIC0.45□□□□□ -2.34
SOX1O00570 SNORD113-4-201ENST00000364802 75 ntBASIC0.44□□□□□ -2.34
SOX1O00570 RNU6-180P-201ENST00000516697 61 ntBASIC0.44□□□□□ -2.34
SOX1O00570 MIR4315-1-201ENST00000636800 73 ntBASIC0.44□□□□□ -2.34
SOX1O00570 MIR4315-2-201ENST00000640925 73 ntBASIC0.44□□□□□ -2.34
SOX1O00570 Y_RNA.109-201ENST00000363215 102 ntBASIC0.43□□□□□ -2.34
SOX1O00570 RNA5SP368-201ENST00000364298 116 ntBASIC0.42□□□□□ -2.34
SOX1O00570 RNU6-458P-201ENST00000384179 107 ntBASIC0.42□□□□□ -2.34
SOX1O00570 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
SOX1O00570 IGLVI-20-201ENST00000519296 130 ntBASIC0.42□□□□□ -2.34
SOX1O00570 U6.58-201ENST00000613107 107 ntBASIC0.42□□□□□ -2.34
SOX1O00570 Y_RNA.185-201ENST00000363894 100 ntBASIC0.41□□□□□ -2.34
SOX1O00570 RNU6-900P-201ENST00000384498 102 ntBASIC0.41□□□□□ -2.34
SOX1O00570 RNA5SP163-201ENST00000410304 99 ntBASIC0.41□□□□□ -2.34
SOX1O00570 RNU7-55P-201ENST00000459426 62 ntBASIC0.41□□□□□ -2.34
SOX1O00570 MIR7110-201ENST00000612638 86 ntBASIC0.41□□□□□ -2.34
SOX1O00570 MIR610-201ENST00000385139 96 ntBASIC0.4□□□□□ -2.35
SOX1O00570 MIR548H2-201ENST00000408874 88 ntBASIC0.4□□□□□ -2.35
SOX1O00570 RNU6-1133P-201ENST00000410963 100 ntBASIC0.4□□□□□ -2.35
SOX1O00570 AL391099.1-201ENST00000624635 187 ntBASIC0.4□□□□□ -2.35
SOX1O00570 MIR148A-201ENST00000362215 68 ntBASIC0.39□□□□□ -2.35
SOX1O00570 SNORD116.2-201ENST00000391251 93 ntBASIC0.39□□□□□ -2.35
SOX1O00570 Y_RNA.722-201ENST00000517279 114 ntBASIC0.39□□□□□ -2.35
SOX1O00570 MIR4743-201ENST00000584576 69 ntBASIC0.39□□□□□ -2.35
SOX1O00570 RNU6-1312P-201ENST00000362425 108 ntBASIC0.38□□□□□ -2.35
SOX1O00570 SNORA62.4-201ENST00000365504 151 ntBASIC0.38□□□□□ -2.35
SOX1O00570 AC108676.2-201ENST00000605225 163 ntBASIC0.38□□□□□ -2.35
SOX1O00570 RNU6-973P-201ENST00000364690 107 ntBASIC0.37□□□□□ -2.35
SOX1O00570 RNU6-808P-201ENST00000391233 108 ntBASIC0.37□□□□□ -2.35
SOX1O00570 RNA5SP266-201ENST00000410273 108 ntBASIC0.37□□□□□ -2.35
SOX1O00570 MIR4493-201ENST00000584016 73 ntBASIC0.37□□□□□ -2.35
SOX1O00570 MIR7978-201ENST00000636158 59 ntBASIC0.37□□□□□ -2.35
SOX1O00570 MIR6507-201ENST00000613630 70 ntBASIC0.36□□□□□ -2.35
SOX1O00570 uc_338.36-201ENST00000622331 158 ntBASIC0.36□□□□□ -2.35
SOX1O00570 SNORD1B-201ENST00000363091 84 ntBASIC0.35□□□□□ -2.35
SOX1O00570 RNU6-455P-201ENST00000384681 107 ntBASIC0.35□□□□□ -2.35
SOX1O00570 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
SOX1O00570 MIR4723-201ENST00000585070 81 ntBASIC0.35□□□□□ -2.35
SOX1O00570 SNORD95.1-201ENST00000364099 68 ntBASIC0.34□□□□□ -2.36
SOX1O00570 MIR593-201ENST00000384856 100 ntBASIC0.34□□□□□ -2.36
SOX1O00570 RNU6-172P-201ENST00000411000 93 ntBASIC0.34□□□□□ -2.36
SOX1O00570 AC104692.1-201ENST00000472406 90 ntBASIC0.34□□□□□ -2.36
SOX1O00570 AC096531.1-201ENST00000419107 107 ntBASIC0.33□□□□□ -2.36
SOX1O00570 RNA5SP67-201ENST00000516422 131 ntBASIC0.33□□□□□ -2.36
SOX1O00570 Y_RNA.698-201ENST00000516798 118 ntBASIC0.33□□□□□ -2.36
SOX1O00570 AC104408.1-201ENST00000605241 170 ntBASIC0.33□□□□□ -2.36
SOX1O00570 RNU6-936P-201ENST00000384005 107 ntBASIC0.32□□□□□ -2.36
SOX1O00570 RNU7-165P-201ENST00000458864 60 ntBASIC0.32□□□□□ -2.36
SOX1O00570 RNA5SP214-201ENST00000363378 118 ntBASIC0.31□□□□□ -2.36
SOX1O00570 SNORA42.1-201ENST00000363515 137 ntBASIC0.31□□□□□ -2.36
SOX1O00570 SNORA40.16-201ENST00000517238 121 ntBASIC0.31□□□□□ -2.36
SOX1O00570 MIR4464-201ENST00000580818 92 ntBASIC0.31□□□□□ -2.36
SOX1O00570 MIR6888-201ENST00000621977 67 ntBASIC0.31□□□□□ -2.36
SOX1O00570 Y_RNA.457-201ENST00000384237 111 ntBASIC0.3□□□□□ -2.36
SOX1O00570 RNU6-1184P-201ENST00000384588 108 ntBASIC0.3□□□□□ -2.36
SOX1O00570 MIR604-201ENST00000384880 94 ntBASIC0.3□□□□□ -2.36
SOX1O00570 MIR145-201ENST00000384967 88 ntBASIC0.3□□□□□ -2.36
SOX1O00570 SNORA40B-201ENST00000385573 128 ntBASIC0.3□□□□□ -2.36
SOX1O00570 AP001180.6-201ENST00000584918 159 ntBASIC0.3□□□□□ -2.36
SOX1O00570 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.3□□□□□ -2.36
SOX1O00570 AL445584.3-201ENST00000617173 78 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms