Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.64□□□□□ -2.67
CLDN5O00501 MIR507-201ENST00000385234 94 ntBASIC-1.64□□□□□ -2.67
CLDN5O00501 SNORA26.4-201ENST00000391188 123 ntBASIC-1.64□□□□□ -2.67
CLDN5O00501 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.64□□□□□ -2.67
CLDN5O00501 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.64□□□□□ -2.67
CLDN5O00501 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.64□□□□□ -2.67
CLDN5O00501 MIR6874-201ENST00000635894 71 ntBASIC-1.64□□□□□ -2.67
CLDN5O00501 RNU6-340P-201ENST00000364005 107 ntBASIC-1.65□□□□□ -2.67
CLDN5O00501 RNU6-746P-201ENST00000384112 109 ntBASIC-1.66□□□□□ -2.68
CLDN5O00501 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.66□□□□□ -2.68
CLDN5O00501 SNORD63.1-201ENST00000516178 80 ntBASIC-1.66□□□□□ -2.68
CLDN5O00501 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.66□□□□□ -2.68
CLDN5O00501 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.66□□□□□ -2.68
CLDN5O00501 SNORD115-33-201ENST00000363723 82 ntBASIC-1.67□□□□□ -2.68
CLDN5O00501 SNORD115-27-201ENST00000364430 82 ntBASIC-1.67□□□□□ -2.68
CLDN5O00501 RNU6-106P-201ENST00000384405 107 ntBASIC-1.67□□□□□ -2.68
CLDN5O00501 SNORA19-201ENST00000384737 128 ntBASIC-1.67□□□□□ -2.68
CLDN5O00501 MIR519C-201ENST00000385053 87 ntBASIC-1.67□□□□□ -2.68
CLDN5O00501 RNU6-576P-201ENST00000390854 102 ntBASIC-1.67□□□□□ -2.68
CLDN5O00501 SNORD77.2-201ENST00000391045 68 ntBASIC-1.67□□□□□ -2.68
CLDN5O00501 AL021921.1-201ENST00000442774 93 ntBASIC-1.67□□□□□ -2.68
CLDN5O00501 RNU6-774P-201ENST00000363238 107 ntBASIC-1.68□□□□□ -2.68
CLDN5O00501 RNU6-209P-201ENST00000384118 107 ntBASIC-1.68□□□□□ -2.68
CLDN5O00501 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.69□□□□□ -2.68
CLDN5O00501 AL035461.1-201ENST00000421490 332 ntBASIC-1.69□□□□□ -2.68
CLDN5O00501 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.69□□□□□ -2.68
CLDN5O00501 MIR6818-201ENST00000621576 65 ntBASIC-1.69□□□□□ -2.68
CLDN5O00501 RNA5SP405-201ENST00000363059 114 ntBASIC-1.7□□□□□ -2.68
CLDN5O00501 AC008267.6-201ENST00000441664 139 ntBASIC-1.7□□□□□ -2.68
CLDN5O00501 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.71□□□□□ -2.68
CLDN5O00501 SNORD115-37-201ENST00000363768 82 ntBASIC-1.72□□□□□ -2.68
CLDN5O00501 RNU6-959P-201ENST00000384671 107 ntBASIC-1.72□□□□□ -2.68
CLDN5O00501 MIR29B1-201ENST00000385015 81 ntBASIC-1.73□□□□□ -2.69
CLDN5O00501 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.73□□□□□ -2.69
CLDN5O00501 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.73□□□□□ -2.69
CLDN5O00501 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.74□□□□□ -2.69
CLDN5O00501 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.74□□□□□ -2.69
CLDN5O00501 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.74□□□□□ -2.69
CLDN5O00501 AL353691.2-201ENST00000443795 59 ntBASIC-1.74□□□□□ -2.69
CLDN5O00501 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.75□□□□□ -2.69
CLDN5O00501 RNU6-766P-201ENST00000362478 107 ntBASIC-1.75□□□□□ -2.69
CLDN5O00501 SNORD115-22-201ENST00000364456 82 ntBASIC-1.75□□□□□ -2.69
CLDN5O00501 RNU4-61P-201ENST00000411243 107 ntBASIC-1.75□□□□□ -2.69
CLDN5O00501 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.75□□□□□ -2.69
CLDN5O00501 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.75□□□□□ -2.69
CLDN5O00501 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.75□□□□□ -2.69
CLDN5O00501 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.76□□□□□ -2.69
CLDN5O00501 MIR548C-201ENST00000384815 97 ntBASIC-1.76□□□□□ -2.69
CLDN5O00501 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.76□□□□□ -2.69
CLDN5O00501 RNU6-656P-201ENST00000516785 107 ntBASIC-1.76□□□□□ -2.69
CLDN5O00501 AL365222.1-201ENST00000614661 98 ntBASIC-1.76□□□□□ -2.69
CLDN5O00501 RNU7-88P-201ENST00000458752 63 ntBASIC-1.77□□□□□ -2.69
CLDN5O00501 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.77□□□□□ -2.69
CLDN5O00501 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.78□□□□□ -2.69
CLDN5O00501 MTATP8P2-201ENST00000435212 202 ntBASIC-1.78□□□□□ -2.69
CLDN5O00501 RNU6-194P-201ENST00000363862 105 ntBASIC-1.79□□□□□ -2.7
CLDN5O00501 U2.7-201ENST00000619197 100 ntBASIC-1.79□□□□□ -2.7
CLDN5O00501 RNU6-633P-201ENST00000362612 103 ntBASIC-1.8□□□□□ -2.7
CLDN5O00501 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.8□□□□□ -2.7
CLDN5O00501 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.8□□□□□ -2.7
CLDN5O00501 RNU6-807P-201ENST00000516805 107 ntBASIC-1.8□□□□□ -2.7
CLDN5O00501 MIR4668-201ENST00000582284 70 ntBASIC-1.8□□□□□ -2.7
CLDN5O00501 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.8□□□□□ -2.7
CLDN5O00501 RNU6-645P-201ENST00000364649 106 ntBASIC-1.81□□□□□ -2.7
CLDN5O00501 MIR548AG1-201ENST00000579932 66 ntBASIC-1.81□□□□□ -2.7
CLDN5O00501 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.82□□□□□ -2.7
CLDN5O00501 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.82□□□□□ -2.7
CLDN5O00501 RNU6-589P-201ENST00000516485 107 ntBASIC-1.82□□□□□ -2.7
CLDN5O00501 U7.5-201ENST00000517224 61 ntBASIC-1.82□□□□□ -2.7
CLDN5O00501 MIR2052-201ENST00000636055 55 ntBASIC-1.82□□□□□ -2.7
CLDN5O00501 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.83□□□□□ -2.7
CLDN5O00501 AC093729.1-201ENST00000513074 128 ntBASIC-1.84□□□□□ -2.7
CLDN5O00501 RNU6-246P-201ENST00000384702 107 ntBASIC-1.85□□□□□ -2.71
CLDN5O00501 RNA5SP26-201ENST00000362406 119 ntBASIC-1.86□□□□□ -2.71
CLDN5O00501 AL031737.1-201ENST00000450125 223 ntBASIC-1.86□□□□□ -2.71
CLDN5O00501 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.86□□□□□ -2.71
CLDN5O00501 MIR4490-201ENST00000582647 84 ntBASIC-1.86□□□□□ -2.71
CLDN5O00501 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.87□□□□□ -2.71
CLDN5O00501 MIR5683-201ENST00000636514 76 ntBASIC-1.87□□□□□ -2.71
CLDN5O00501 RNU6-624P-201ENST00000363411 107 ntBASIC-1.88□□□□□ -2.71
CLDN5O00501 RNU6-164P-201ENST00000364604 103 ntBASIC-1.88□□□□□ -2.71
CLDN5O00501 RNU6-81P-201ENST00000365608 104 ntBASIC-1.88□□□□□ -2.71
CLDN5O00501 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.88□□□□□ -2.71
CLDN5O00501 MIR3668-201ENST00000582138 75 ntBASIC-1.88□□□□□ -2.71
CLDN5O00501 MIR450A1-201ENST00000362262 91 ntBASIC-1.89□□□□□ -2.71
CLDN5O00501 RNU6-834P-201ENST00000362367 110 ntBASIC-1.89□□□□□ -2.71
CLDN5O00501 SNORD116-22-201ENST00000384430 92 ntBASIC-1.89□□□□□ -2.71
CLDN5O00501 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.89□□□□□ -2.71
CLDN5O00501 SNORD19-201ENST00000391191 68 ntBASIC-1.9□□□□□ -2.71
CLDN5O00501 AL078595.1-201ENST00000404458 226 ntBASIC-1.9□□□□□ -2.71
CLDN5O00501 MIR548Q-201ENST00000408404 100 ntBASIC-1.9□□□□□ -2.71
CLDN5O00501 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.9□□□□□ -2.71
CLDN5O00501 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.9□□□□□ -2.71
CLDN5O00501 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.9□□□□□ -2.71
CLDN5O00501 MIR3675-201ENST00000583661 73 ntBASIC-1.9□□□□□ -2.71
CLDN5O00501 RNU6-330P-201ENST00000363015 107 ntBASIC-1.91□□□□□ -2.72
CLDN5O00501 SNORA8.1-201ENST00000384250 140 ntBASIC-1.91□□□□□ -2.72
CLDN5O00501 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.91□□□□□ -2.72
CLDN5O00501 AP002795.1-201ENST00000534879 84 ntBASIC-1.91□□□□□ -2.72
CLDN5O00501 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.92□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 230.7 ms