Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 SNORD56B-201ENST00000384713 71 ntBASIC-0.05□□□□□ -2.42
FOXN3O00409 AL021921.1-201ENST00000442774 93 ntBASIC-0.05□□□□□ -2.42
FOXN3O00409 AC104692.1-201ENST00000472406 90 ntBASIC-0.05□□□□□ -2.42
FOXN3O00409 MIR548AG1-201ENST00000579932 66 ntBASIC-0.05□□□□□ -2.42
FOXN3O00409 MIR4432-201ENST00000581823 84 ntBASIC-0.05□□□□□ -2.42
FOXN3O00409 SNORD115-23-201ENST00000364461 82 ntBASIC-0.06□□□□□ -2.42
FOXN3O00409 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.06□□□□□ -2.42
FOXN3O00409 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
FOXN3O00409 RNU7-55P-201ENST00000459426 62 ntBASIC-0.06□□□□□ -2.42
FOXN3O00409 RNU6-539P-201ENST00000516665 103 ntBASIC-0.06□□□□□ -2.42
FOXN3O00409 IGLVI-20-201ENST00000519296 130 ntBASIC-0.06□□□□□ -2.42
FOXN3O00409 U4.4-201ENST00000620626 117 ntBASIC-0.06□□□□□ -2.42
FOXN3O00409 MIR1295B-201ENST00000636144 60 ntBASIC-0.06□□□□□ -2.42
FOXN3O00409 MIR655-201ENST00000362159 97 ntBASIC-0.07□□□□□ -2.42
FOXN3O00409 SNORA25.4-201ENST00000363666 124 ntBASIC-0.07□□□□□ -2.42
FOXN3O00409 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.07□□□□□ -2.42
FOXN3O00409 RNU6-800P-201ENST00000384473 103 ntBASIC-0.07□□□□□ -2.42
FOXN3O00409 MIR4802-201ENST00000581881 80 ntBASIC-0.07□□□□□ -2.42
FOXN3O00409 MIR6086-201ENST00000638065 55 ntBASIC-0.07□□□□□ -2.42
FOXN3O00409 RNA5SP215-201ENST00000363440 122 ntBASIC-0.08□□□□□ -2.42
FOXN3O00409 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.08□□□□□ -2.42
FOXN3O00409 RNU6-973P-201ENST00000364690 107 ntBASIC-0.08□□□□□ -2.42
FOXN3O00409 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.08□□□□□ -2.42
FOXN3O00409 MIR5589-201ENST00000579442 60 ntBASIC-0.08□□□□□ -2.42
FOXN3O00409 MIR4636-201ENST00000582271 80 ntBASIC-0.08□□□□□ -2.42
FOXN3O00409 MIR8068-201ENST00000618032 68 ntBASIC-0.08□□□□□ -2.42
FOXN3O00409 RNU6-302P-201ENST00000365249 107 ntBASIC-0.09□□□□□ -2.42
FOXN3O00409 RNU6-46P-201ENST00000383860 107 ntBASIC-0.09□□□□□ -2.42
FOXN3O00409 MIR1265-201ENST00000408444 86 ntBASIC-0.09□□□□□ -2.42
FOXN3O00409 RNU6-698P-201ENST00000363523 107 ntBASIC-0.1□□□□□ -2.43
FOXN3O00409 RNU6-34P-201ENST00000364874 107 ntBASIC-0.1□□□□□ -2.43
FOXN3O00409 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
FOXN3O00409 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.1□□□□□ -2.43
FOXN3O00409 RNA5SP470-201ENST00000516463 106 ntBASIC-0.1□□□□□ -2.43
FOXN3O00409 RNU7-154P-201ENST00000516194 62 ntBASIC-0.11□□□□□ -2.43
FOXN3O00409 SNORD114-31-201ENST00000363219 75 ntBASIC-0.12□□□□□ -2.43
FOXN3O00409 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.12□□□□□ -2.43
FOXN3O00409 AC096531.1-201ENST00000419107 107 ntBASIC-0.12□□□□□ -2.43
FOXN3O00409 Z95118.1-201ENST00000421372 247 ntBASIC-0.12□□□□□ -2.43
FOXN3O00409 RNU6-542P-201ENST00000516405 103 ntBASIC-0.12□□□□□ -2.43
FOXN3O00409 HAR1A.1-201ENST00000459583 118 ntBASIC-0.13□□□□□ -2.43
FOXN3O00409 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.13□□□□□ -2.43
FOXN3O00409 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.13□□□□□ -2.43
FOXN3O00409 MIR527-201ENST00000385244 85 ntBASIC-0.14□□□□□ -2.43
FOXN3O00409 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
FOXN3O00409 SNORD113-2-201ENST00000391082 72 ntBASIC-0.14□□□□□ -2.43
FOXN3O00409 SNORD38.3-201ENST00000516599 73 ntBASIC-0.14□□□□□ -2.43
FOXN3O00409 MIR4464-201ENST00000580818 92 ntBASIC-0.14□□□□□ -2.43
FOXN3O00409 MIR6854-201ENST00000614935 69 ntBASIC-0.14□□□□□ -2.43
FOXN3O00409 MIR6888-201ENST00000621977 67 ntBASIC-0.14□□□□□ -2.43
FOXN3O00409 SNORA32.1-201ENST00000364514 115 ntBASIC-0.16□□□□□ -2.44
FOXN3O00409 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.16□□□□□ -2.44
FOXN3O00409 AC108676.2-201ENST00000605225 163 ntBASIC-0.16□□□□□ -2.44
FOXN3O00409 AL590491.3-201ENST00000610731 82 ntBASIC-0.16□□□□□ -2.44
FOXN3O00409 SNORA18.1-201ENST00000363418 128 ntBASIC-0.17□□□□□ -2.44
FOXN3O00409 MIR124-2-201ENST00000385081 109 ntBASIC-0.17□□□□□ -2.44
FOXN3O00409 MIR214-201ENST00000385214 110 ntBASIC-0.17□□□□□ -2.44
FOXN3O00409 MIR4280-201ENST00000582178 76 ntBASIC-0.17□□□□□ -2.44
FOXN3O00409 MIR4788-201ENST00000639104 80 ntBASIC-0.17□□□□□ -2.44
FOXN3O00409 SNORD114-11-201ENST00000363738 75 ntBASIC-0.18□□□□□ -2.44
FOXN3O00409 RNA5SP192-201ENST00000364404 120 ntBASIC-0.18□□□□□ -2.44
FOXN3O00409 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.18□□□□□ -2.44
FOXN3O00409 SNORA41B-201ENST00000384785 128 ntBASIC-0.18□□□□□ -2.44
FOXN3O00409 SNORD4A-201ENST00000459174 72 ntBASIC-0.18□□□□□ -2.44
FOXN3O00409 AC114755.3-201ENST00000481111 251 ntBASIC-0.18□□□□□ -2.44
FOXN3O00409 AC139453.2-201ENST00000487255 133 ntBASIC-0.18□□□□□ -2.44
FOXN3O00409 RNA5SP66-201ENST00000517178 101 ntBASIC-0.18□□□□□ -2.44
FOXN3O00409 MIR4511-201ENST00000582784 87 ntBASIC-0.18□□□□□ -2.44
FOXN3O00409 MIR4645-201ENST00000583158 77 ntBASIC-0.18□□□□□ -2.44
FOXN3O00409 AL445584.3-201ENST00000617173 78 ntBASIC-0.18□□□□□ -2.44
FOXN3O00409 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.19□□□□□ -2.44
FOXN3O00409 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.19□□□□□ -2.44
FOXN3O00409 RNU7-88P-201ENST00000458752 63 ntBASIC-0.19□□□□□ -2.44
FOXN3O00409 RNU6-758P-201ENST00000516292 89 ntBASIC-0.19□□□□□ -2.44
FOXN3O00409 MIR4263-201ENST00000584745 83 ntBASIC-0.19□□□□□ -2.44
FOXN3O00409 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.2□□□□□ -2.44
FOXN3O00409 SNORA62.4-201ENST00000365504 151 ntBASIC-0.2□□□□□ -2.44
FOXN3O00409 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
FOXN3O00409 AP001180.6-201ENST00000584918 159 ntBASIC-0.2□□□□□ -2.44
FOXN3O00409 RNU6-92P-201ENST00000605893 104 ntBASIC-0.2□□□□□ -2.44
FOXN3O00409 MIR3666-201ENST00000607845 111 ntBASIC-0.2□□□□□ -2.44
FOXN3O00409 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.21□□□□□ -2.44
FOXN3O00409 SNORA25.5-201ENST00000363782 126 ntBASIC-0.21□□□□□ -2.44
FOXN3O00409 RNU6-458P-201ENST00000384179 107 ntBASIC-0.21□□□□□ -2.44
FOXN3O00409 RNU6-246P-201ENST00000384702 107 ntBASIC-0.21□□□□□ -2.44
FOXN3O00409 RNA5SP25-201ENST00000410815 110 ntBASIC-0.21□□□□□ -2.44
FOXN3O00409 RNA5SP169-201ENST00000517268 117 ntBASIC-0.21□□□□□ -2.44
FOXN3O00409 U6.58-201ENST00000613107 107 ntBASIC-0.21□□□□□ -2.44
FOXN3O00409 AC103706.3-201ENST00000636297 85 ntBASIC-0.21□□□□□ -2.44
FOXN3O00409 AC093726.3-201ENST00000637588 150 ntBASIC-0.21□□□□□ -2.44
FOXN3O00409 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.22□□□□□ -2.44
FOXN3O00409 snoU13.19-201ENST00000459148 104 ntBASIC-0.22□□□□□ -2.44
FOXN3O00409 MIR6851-201ENST00000617060 67 ntBASIC-0.22□□□□□ -2.44
FOXN3O00409 SNORD60.1-201ENST00000362451 73 ntBASIC-0.23□□□□□ -2.45
FOXN3O00409 MIR4493-201ENST00000584016 73 ntBASIC-0.23□□□□□ -2.45
FOXN3O00409 RNU6-590P-201ENST00000365039 107 ntBASIC-0.24□□□□□ -2.45
FOXN3O00409 MIR604-201ENST00000384880 94 ntBASIC-0.24□□□□□ -2.45
FOXN3O00409 RNA5SP300-201ENST00000391197 107 ntBASIC-0.24□□□□□ -2.45
FOXN3O00409 AC125388.1-201ENST00000459631 156 ntBASIC-0.24□□□□□ -2.45
FOXN3O00409 U7.5-201ENST00000517224 61 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms