Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 MIR548C-201ENST00000384815 97 ntBASIC-0.78□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-129P-201ENST00000391022 107 ntBASIC-0.78□□□□□ -2.53
TRAV40A0A0B4J280 AC074348.1-201ENST00000426503 132 ntBASIC-0.78□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-303P-201ENST00000517091 106 ntBASIC-0.78□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-789P-201ENST00000517105 102 ntBASIC-0.78□□□□□ -2.53
TRAV40A0A0B4J280 MIR3675-201ENST00000583661 73 ntBASIC-0.78□□□□□ -2.53
TRAV40A0A0B4J280 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.78□□□□□ -2.53
TRAV40A0A0B4J280 MIR664A-201ENST00000626086 82 ntBASIC-0.78□□□□□ -2.53
TRAV40A0A0B4J280 MIR382-201ENST00000637119 76 ntBASIC-0.78□□□□□ -2.53
TRAV40A0A0B4J280 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.79□□□□□ -2.54
TRAV40A0A0B4J280 RNU7-88P-201ENST00000458752 63 ntBASIC-0.79□□□□□ -2.54
TRAV40A0A0B4J280 SNORD63.1-201ENST00000516178 80 ntBASIC-0.79□□□□□ -2.54
TRAV40A0A0B4J280 SNORD45.1-201ENST00000363181 77 ntBASIC-0.8□□□□□ -2.54
TRAV40A0A0B4J280 AL021921.1-201ENST00000442774 93 ntBASIC-0.8□□□□□ -2.54
TRAV40A0A0B4J280 RNU6-924P-201ENST00000362926 108 ntBASIC-0.81□□□□□ -2.54
TRAV40A0A0B4J280 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.81□□□□□ -2.54
TRAV40A0A0B4J280 AP002795.1-201ENST00000534879 84 ntBASIC-0.81□□□□□ -2.54
TRAV40A0A0B4J280 U7.5-201ENST00000517224 61 ntBASIC-0.82□□□□□ -2.54
TRAV40A0A0B4J280 RNY4P30-201ENST00000410216 95 ntBASIC-0.83□□□□□ -2.54
TRAV40A0A0B4J280 RNU7-174P-201ENST00000516248 59 ntBASIC-0.83□□□□□ -2.54
TRAV40A0A0B4J280 MIR4499-201ENST00000584834 69 ntBASIC-0.83□□□□□ -2.54
TRAV40A0A0B4J280 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.84□□□□□ -2.54
TRAV40A0A0B4J280 SNORD83B-201ENST00000386745 93 ntBASIC-0.84□□□□□ -2.54
TRAV40A0A0B4J280 SNORA26.4-201ENST00000391188 123 ntBASIC-0.84□□□□□ -2.54
TRAV40A0A0B4J280 SNORD19-201ENST00000391191 68 ntBASIC-0.84□□□□□ -2.54
TRAV40A0A0B4J280 MIR5588-201ENST00000581890 63 ntBASIC-0.84□□□□□ -2.54
TRAV40A0A0B4J280 RNY1P1-201ENST00000364372 112 ntBASIC-0.85□□□□□ -2.55
TRAV40A0A0B4J280 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.85□□□□□ -2.55
TRAV40A0A0B4J280 RNU6-979P-201ENST00000383896 107 ntBASIC-0.85□□□□□ -2.55
TRAV40A0A0B4J280 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.85□□□□□ -2.55
TRAV40A0A0B4J280 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.85□□□□□ -2.55
TRAV40A0A0B4J280 SCARNA18B-201ENST00000458806 135 ntBASIC-0.85□□□□□ -2.55
TRAV40A0A0B4J280 RNU7-134P-201ENST00000458997 64 ntBASIC-0.85□□□□□ -2.55
TRAV40A0A0B4J280 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.85□□□□□ -2.55
TRAV40A0A0B4J280 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.85□□□□□ -2.55
TRAV40A0A0B4J280 IGLL4P-201ENST00000614590 133 ntBASIC-0.85□□□□□ -2.55
TRAV40A0A0B4J280 uc_338.19-201ENST00000616808 99 ntBASIC-0.85□□□□□ -2.55
TRAV40A0A0B4J280 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.86□□□□□ -2.55
TRAV40A0A0B4J280 RNU6-153P-201ENST00000364422 104 ntBASIC-0.86□□□□□ -2.55
TRAV40A0A0B4J280 RNU6-732P-201ENST00000516033 103 ntBASIC-0.86□□□□□ -2.55
TRAV40A0A0B4J280 RNU6-807P-201ENST00000516805 107 ntBASIC-0.86□□□□□ -2.55
TRAV40A0A0B4J280 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.86□□□□□ -2.55
TRAV40A0A0B4J280 SNORD45A-201ENST00000384512 84 ntBASIC-0.87□□□□□ -2.55
TRAV40A0A0B4J280 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.87□□□□□ -2.55
TRAV40A0A0B4J280 U4.4-201ENST00000620626 117 ntBASIC-0.87□□□□□ -2.55
TRAV40A0A0B4J280 MIR494-201ENST00000349529 81 ntBASIC-0.88□□□□□ -2.55
TRAV40A0A0B4J280 SNORD115-33-201ENST00000363723 82 ntBASIC-0.88□□□□□ -2.55
TRAV40A0A0B4J280 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.88□□□□□ -2.55
TRAV40A0A0B4J280 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.88□□□□□ -2.55
TRAV40A0A0B4J280 MIR548AI-201ENST00000579940 88 ntBASIC-0.88□□□□□ -2.55
TRAV40A0A0B4J280 MIR548V-201ENST00000584165 80 ntBASIC-0.88□□□□□ -2.55
TRAV40A0A0B4J280 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.88□□□□□ -2.55
TRAV40A0A0B4J280 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.89□□□□□ -2.55
TRAV40A0A0B4J280 RNU6-587P-201ENST00000391282 106 ntBASIC-0.89□□□□□ -2.55
TRAV40A0A0B4J280 MIR409-201ENST00000362237 79 ntBASIC-0.9□□□□□ -2.55
TRAV40A0A0B4J280 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.9□□□□□ -2.55
TRAV40A0A0B4J280 SNORD113.1-201ENST00000363280 73 ntBASIC-0.9□□□□□ -2.55
TRAV40A0A0B4J280 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.9□□□□□ -2.55
TRAV40A0A0B4J280 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.9□□□□□ -2.55
TRAV40A0A0B4J280 RNU6-458P-201ENST00000384179 107 ntBASIC-0.9□□□□□ -2.55
TRAV40A0A0B4J280 RNA5SP67-201ENST00000516422 131 ntBASIC-0.9□□□□□ -2.55
TRAV40A0A0B4J280 snoU83B.1-201ENST00000517136 88 ntBASIC-0.9□□□□□ -2.55
TRAV40A0A0B4J280 U6.58-201ENST00000613107 107 ntBASIC-0.9□□□□□ -2.55
TRAV40A0A0B4J280 RNA5SP26-201ENST00000362406 119 ntBASIC-0.91□□□□□ -2.56
TRAV40A0A0B4J280 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.91□□□□□ -2.56
TRAV40A0A0B4J280 MIR630-201ENST00000384957 97 ntBASIC-0.91□□□□□ -2.56
TRAV40A0A0B4J280 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.91□□□□□ -2.56
TRAV40A0A0B4J280 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.92□□□□□ -2.56
TRAV40A0A0B4J280 RPL35AP4-201ENST00000412007 102 ntBASIC-0.92□□□□□ -2.56
TRAV40A0A0B4J280 RNU7-171P-201ENST00000459581 62 ntBASIC-0.92□□□□□ -2.56
TRAV40A0A0B4J280 MIR4712-201ENST00000583750 82 ntBASIC-0.92□□□□□ -2.56
TRAV40A0A0B4J280 RNU6-315P-201ENST00000362666 107 ntBASIC-0.93□□□□□ -2.56
TRAV40A0A0B4J280 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.93□□□□□ -2.56
TRAV40A0A0B4J280 MIR507-201ENST00000385234 94 ntBASIC-0.93□□□□□ -2.56
TRAV40A0A0B4J280 AL353691.2-201ENST00000443795 59 ntBASIC-0.93□□□□□ -2.56
TRAV40A0A0B4J280 MIR1297-201ENST00000637311 77 ntBASIC-0.93□□□□□ -2.56
TRAV40A0A0B4J280 RNU6-698P-201ENST00000363523 107 ntBASIC-0.94□□□□□ -2.56
TRAV40A0A0B4J280 RNU6-598P-201ENST00000364017 105 ntBASIC-0.94□□□□□ -2.56
TRAV40A0A0B4J280 RNU6-34P-201ENST00000364874 107 ntBASIC-0.94□□□□□ -2.56
TRAV40A0A0B4J280 RNU6-787P-201ENST00000384032 107 ntBASIC-0.94□□□□□ -2.56
TRAV40A0A0B4J280 MIR527-201ENST00000385244 85 ntBASIC-0.94□□□□□ -2.56
TRAV40A0A0B4J280 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.94□□□□□ -2.56
TRAV40A0A0B4J280 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.94□□□□□ -2.56
TRAV40A0A0B4J280 RNU6-294P-201ENST00000364999 102 ntBASIC-0.95□□□□□ -2.56
TRAV40A0A0B4J280 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.95□□□□□ -2.56
TRAV40A0A0B4J280 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.95□□□□□ -2.56
TRAV40A0A0B4J280 MIR5582-201ENST00000579697 68 ntBASIC-0.95□□□□□ -2.56
TRAV40A0A0B4J280 MIR6818-201ENST00000621576 65 ntBASIC-0.95□□□□□ -2.56
TRAV40A0A0B4J280 U2.18-201ENST00000622185 84 ntBASIC-0.95□□□□□ -2.56
TRAV40A0A0B4J280 MIR5683-201ENST00000636514 76 ntBASIC-0.95□□□□□ -2.56
TRAV40A0A0B4J280 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.96□□□□□ -2.56
TRAV40A0A0B4J280 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.96□□□□□ -2.56
TRAV40A0A0B4J280 SNORD113-2-201ENST00000391082 72 ntBASIC-0.96□□□□□ -2.56
TRAV40A0A0B4J280 MIR548Q-201ENST00000408404 100 ntBASIC-0.96□□□□□ -2.56
TRAV40A0A0B4J280 MIR1245B-201ENST00000636115 69 ntBASIC-0.96□□□□□ -2.56
TRAV40A0A0B4J280 RNU6-668P-201ENST00000364180 107 ntBASIC-0.97□□□□□ -2.56
TRAV40A0A0B4J280 SNORD115-31-201ENST00000365318 82 ntBASIC-0.97□□□□□ -2.56
TRAV40A0A0B4J280 SNORD116-24-201ENST00000384549 92 ntBASIC-0.97□□□□□ -2.56
TRAV40A0A0B4J280 MIR3134-201ENST00000579433 74 ntBASIC-0.97□□□□□ -2.56
TRAV40A0A0B4J280 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.98□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms