Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.02□□□□□ -2.73
TRAV1-1A0A0B4J248 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.02□□□□□ -2.73
TRAV1-1A0A0B4J248 RNU6-394P-201ENST00000410735 107 ntBASIC-2.02□□□□□ -2.73
TRAV1-1A0A0B4J248 MTND4LP9-201ENST00000427694 174 ntBASIC-2.02□□□□□ -2.73
TRAV1-1A0A0B4J248 SNORD54-201ENST00000459159 67 ntBASIC-2.02□□□□□ -2.73
TRAV1-1A0A0B4J248 RNU6-426P-201ENST00000516464 97 ntBASIC-2.02□□□□□ -2.73
TRAV1-1A0A0B4J248 AC062037.2-201ENST00000610137 73 ntBASIC-2.02□□□□□ -2.73
TRAV1-1A0A0B4J248 Y_RNA.204-201ENST00000364112 102 ntBASIC-2.03□□□□□ -2.73
TRAV1-1A0A0B4J248 MIR630-201ENST00000384957 97 ntBASIC-2.03□□□□□ -2.73
TRAV1-1A0A0B4J248 MIR548AA1-201ENST00000384971 97 ntBASIC-2.03□□□□□ -2.73
TRAV1-1A0A0B4J248 RNU7-120P-201ENST00000459334 63 ntBASIC-2.03□□□□□ -2.73
TRAV1-1A0A0B4J248 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.03□□□□□ -2.73
TRAV1-1A0A0B4J248 MIR548W-201ENST00000581970 74 ntBASIC-2.03□□□□□ -2.73
TRAV1-1A0A0B4J248 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.03□□□□□ -2.73
TRAV1-1A0A0B4J248 RNA5SP405-201ENST00000363059 114 ntBASIC-2.04□□□□□ -2.74
TRAV1-1A0A0B4J248 SNORD1B-201ENST00000363091 84 ntBASIC-2.04□□□□□ -2.74
TRAV1-1A0A0B4J248 RNU6-194P-201ENST00000363862 105 ntBASIC-2.04□□□□□ -2.74
TRAV1-1A0A0B4J248 Y_RNA.307-201ENST00000365022 117 ntBASIC-2.04□□□□□ -2.74
TRAV1-1A0A0B4J248 Y_RNA.398-201ENST00000383952 99 ntBASIC-2.04□□□□□ -2.74
TRAV1-1A0A0B4J248 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.04□□□□□ -2.74
TRAV1-1A0A0B4J248 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.04□□□□□ -2.74
TRAV1-1A0A0B4J248 MIR568-201ENST00000385036 95 ntBASIC-2.04□□□□□ -2.74
TRAV1-1A0A0B4J248 SNORD113-2-201ENST00000391082 72 ntBASIC-2.04□□□□□ -2.74
TRAV1-1A0A0B4J248 snoU13.10-201ENST00000459301 103 ntBASIC-2.04□□□□□ -2.74
TRAV1-1A0A0B4J248 SNORA8.1-201ENST00000384250 140 ntBASIC-2.05□□□□□ -2.74
TRAV1-1A0A0B4J248 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.05□□□□□ -2.74
TRAV1-1A0A0B4J248 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.05□□□□□ -2.74
TRAV1-1A0A0B4J248 SNORD116-16-201ENST00000384533 92 ntBASIC-2.06□□□□□ -2.74
TRAV1-1A0A0B4J248 RNU6-1160P-201ENST00000384546 104 ntBASIC-2.06□□□□□ -2.74
TRAV1-1A0A0B4J248 SNORA41B-201ENST00000384785 128 ntBASIC-2.06□□□□□ -2.74
TRAV1-1A0A0B4J248 MIR519C-201ENST00000385053 87 ntBASIC-2.06□□□□□ -2.74
TRAV1-1A0A0B4J248 MIR3675-201ENST00000583661 73 ntBASIC-2.06□□□□□ -2.74
TRAV1-1A0A0B4J248 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.06□□□□□ -2.74
TRAV1-1A0A0B4J248 U7.3-201ENST00000616123 62 ntBASIC-2.06□□□□□ -2.74
TRAV1-1A0A0B4J248 MIR3914-2-201ENST00000637339 95 ntBASIC-2.06□□□□□ -2.74
TRAV1-1A0A0B4J248 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.07□□□□□ -2.74
TRAV1-1A0A0B4J248 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.07□□□□□ -2.74
TRAV1-1A0A0B4J248 Y_RNA.281-201ENST00000364774 94 ntBASIC-2.07□□□□□ -2.74
TRAV1-1A0A0B4J248 RNY3P8-201ENST00000411366 126 ntBASIC-2.07□□□□□ -2.74
TRAV1-1A0A0B4J248 AC008737.2-201ENST00000599446 118 ntBASIC-2.07□□□□□ -2.74
TRAV1-1A0A0B4J248 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.08□□□□□ -2.74
TRAV1-1A0A0B4J248 SNORD45.1-201ENST00000363181 77 ntBASIC-2.08□□□□□ -2.74
TRAV1-1A0A0B4J248 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.08□□□□□ -2.74
TRAV1-1A0A0B4J248 MIR590-201ENST00000385008 97 ntBASIC-2.08□□□□□ -2.74
TRAV1-1A0A0B4J248 MIR579-201ENST00000385221 98 ntBASIC-2.08□□□□□ -2.74
TRAV1-1A0A0B4J248 SNORD63.2-201ENST00000516303 64 ntBASIC-2.08□□□□□ -2.74
TRAV1-1A0A0B4J248 Y_RNA.701-201ENST00000516812 110 ntBASIC-2.08□□□□□ -2.74
TRAV1-1A0A0B4J248 MTND5P41-201ENST00000517498 206 ntBASIC-2.08□□□□□ -2.74
TRAV1-1A0A0B4J248 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.09□□□□□ -2.74
TRAV1-1A0A0B4J248 RNU6-669P-201ENST00000365575 107 ntBASIC-2.09□□□□□ -2.74
TRAV1-1A0A0B4J248 MTCYBP9-201ENST00000431021 303 ntBASIC-2.09□□□□□ -2.74
TRAV1-1A0A0B4J248 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.09□□□□□ -2.74
TRAV1-1A0A0B4J248 RNU7-151P-201ENST00000516930 53 ntBASIC-2.09□□□□□ -2.74
TRAV1-1A0A0B4J248 AC044792.1-201ENST00000593294 196 ntBASIC-2.09□□□□□ -2.74
TRAV1-1A0A0B4J248 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.09□□□□□ -2.74
TRAV1-1A0A0B4J248 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.09□□□□□ -2.74
TRAV1-1A0A0B4J248 Y_RNA.61-201ENST00000362835 102 ntBASIC-2.1□□□□□ -2.75
TRAV1-1A0A0B4J248 Y_RNA.422-201ENST00000384054 114 ntBASIC-2.1□□□□□ -2.75
TRAV1-1A0A0B4J248 MIR3139-201ENST00000579145 76 ntBASIC-2.1□□□□□ -2.75
TRAV1-1A0A0B4J248 SNORA27.2-201ENST00000363365 126 ntBASIC-2.11□□□□□ -2.75
TRAV1-1A0A0B4J248 RNU6-624P-201ENST00000363411 107 ntBASIC-2.11□□□□□ -2.75
TRAV1-1A0A0B4J248 RNU6-109P-201ENST00000516364 107 ntBASIC-2.11□□□□□ -2.75
TRAV1-1A0A0B4J248 RNU6-184P-201ENST00000516514 107 ntBASIC-2.11□□□□□ -2.75
TRAV1-1A0A0B4J248 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.12□□□□□ -2.75
TRAV1-1A0A0B4J248 RNU6-974P-201ENST00000384099 108 ntBASIC-2.12□□□□□ -2.75
TRAV1-1A0A0B4J248 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.12□□□□□ -2.75
TRAV1-1A0A0B4J248 MIR606-201ENST00000384851 96 ntBASIC-2.12□□□□□ -2.75
TRAV1-1A0A0B4J248 Y_RNA.586-201ENST00000391146 98 ntBASIC-2.12□□□□□ -2.75
TRAV1-1A0A0B4J248 Y_RNA.53-201ENST00000362765 102 ntBASIC-2.13□□□□□ -2.75
TRAV1-1A0A0B4J248 RNU6-257P-201ENST00000410238 98 ntBASIC-2.13□□□□□ -2.75
TRAV1-1A0A0B4J248 RNU6-303P-201ENST00000517091 106 ntBASIC-2.13□□□□□ -2.75
TRAV1-1A0A0B4J248 MIR7978-201ENST00000636158 59 ntBASIC-2.13□□□□□ -2.75
TRAV1-1A0A0B4J248 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.14□□□□□ -2.75
TRAV1-1A0A0B4J248 RNU6-995P-201ENST00000391244 107 ntBASIC-2.14□□□□□ -2.75
TRAV1-1A0A0B4J248 AC074348.1-201ENST00000426503 132 ntBASIC-2.14□□□□□ -2.75
TRAV1-1A0A0B4J248 RNU6-971P-201ENST00000516920 106 ntBASIC-2.14□□□□□ -2.75
TRAV1-1A0A0B4J248 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.14□□□□□ -2.75
TRAV1-1A0A0B4J248 SNORA40-201ENST00000388090 126 ntBASIC-2.15□□□□□ -2.75
TRAV1-1A0A0B4J248 RNU6-633P-201ENST00000362612 103 ntBASIC-2.16□□□□□ -2.76
TRAV1-1A0A0B4J248 SNORD115-37-201ENST00000363768 82 ntBASIC-2.16□□□□□ -2.76
TRAV1-1A0A0B4J248 Y_RNA.290-201ENST00000364879 114 ntBASIC-2.16□□□□□ -2.76
TRAV1-1A0A0B4J248 RNU6-523P-201ENST00000516304 54 ntBASIC-2.16□□□□□ -2.76
TRAV1-1A0A0B4J248 MIR4801-201ENST00000582704 82 ntBASIC-2.16□□□□□ -2.76
TRAV1-1A0A0B4J248 MIR581-201ENST00000384895 96 ntBASIC-2.17□□□□□ -2.76
TRAV1-1A0A0B4J248 MIR1302-3-201ENST00000408128 138 ntBASIC-2.17□□□□□ -2.76
TRAV1-1A0A0B4J248 RNU6-172P-201ENST00000411000 93 ntBASIC-2.17□□□□□ -2.76
TRAV1-1A0A0B4J248 MTATP8P2-201ENST00000435212 202 ntBASIC-2.17□□□□□ -2.76
TRAV1-1A0A0B4J248 MTND4LP1-201ENST00000446263 157 ntBASIC-2.17□□□□□ -2.76
TRAV1-1A0A0B4J248 RNU6-182P-201ENST00000516970 105 ntBASIC-2.17□□□□□ -2.76
TRAV1-1A0A0B4J248 MIR466-201ENST00000580653 84 ntBASIC-2.17□□□□□ -2.76
TRAV1-1A0A0B4J248 MIR4484-201ENST00000582855 83 ntBASIC-2.17□□□□□ -2.76
TRAV1-1A0A0B4J248 AC004792.1-201ENST00000614523 137 ntBASIC-2.17□□□□□ -2.76
TRAV1-1A0A0B4J248 U6.95-201ENST00000636931 70 ntBASIC-2.17□□□□□ -2.76
TRAV1-1A0A0B4J248 RNA5SP215-201ENST00000363440 122 ntBASIC-2.18□□□□□ -2.76
TRAV1-1A0A0B4J248 MIR125B1-201ENST00000385236 88 ntBASIC-2.18□□□□□ -2.76
TRAV1-1A0A0B4J248 MT-TM-201ENST00000387377 68 ntBASIC-2.18□□□□□ -2.76
TRAV1-1A0A0B4J248 RNY4P18-201ENST00000391107 89 ntBASIC-2.18□□□□□ -2.76
TRAV1-1A0A0B4J248 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-2.18□□□□□ -2.76
TRAV1-1A0A0B4J248 RNU6-668P-201ENST00000364180 107 ntBASIC-2.19□□□□□ -2.76
TRAV1-1A0A0B4J248 AC093729.1-201ENST00000513074 128 ntBASIC-2.19□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms