Protein–RNA interactions for Protein: A0A087WSY6

IGKV3D-15, Immunoglobulin kappa variable 3D-15, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-15A0A087WSY6 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.01□□□□□ -2.41
IGKV3D-15A0A087WSY6 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0□□□□□ -2.41
IGKV3D-15A0A087WSY6 Y_RNA.205-201ENST00000364128 113 ntBASIC0□□□□□ -2.41
IGKV3D-15A0A087WSY6 RNA5SP192-201ENST00000364404 120 ntBASIC0□□□□□ -2.41
IGKV3D-15A0A087WSY6 RNU6-973P-201ENST00000364690 107 ntBASIC0□□□□□ -2.41
IGKV3D-15A0A087WSY6 Y_RNA.282-201ENST00000364793 102 ntBASIC0□□□□□ -2.41
IGKV3D-15A0A087WSY6 AC114755.3-201ENST00000481111 251 ntBASIC0□□□□□ -2.41
IGKV3D-15A0A087WSY6 MIR4280-201ENST00000582178 76 ntBASIC0□□□□□ -2.41
IGKV3D-15A0A087WSY6 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.01□□□□□ -2.41
IGKV3D-15A0A087WSY6 RNU6-246P-201ENST00000384702 107 ntBASIC-0.01□□□□□ -2.41
IGKV3D-15A0A087WSY6 RNA5SP63-201ENST00000391225 112 ntBASIC-0.01□□□□□ -2.41
IGKV3D-15A0A087WSY6 AC110620.1-201ENST00000416042 228 ntBASIC-0.01□□□□□ -2.41
IGKV3D-15A0A087WSY6 SNORD60.1-201ENST00000362451 73 ntBASIC-0.02□□□□□ -2.41
IGKV3D-15A0A087WSY6 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.02□□□□□ -2.41
IGKV3D-15A0A087WSY6 RNA5SP330-201ENST00000517096 96 ntBASIC-0.02□□□□□ -2.41
IGKV3D-15A0A087WSY6 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
IGKV3D-15A0A087WSY6 AL590491.3-201ENST00000610731 82 ntBASIC-0.02□□□□□ -2.41
IGKV3D-15A0A087WSY6 AC103706.3-201ENST00000636297 85 ntBASIC-0.02□□□□□ -2.41
IGKV3D-15A0A087WSY6 SNORA25.5-201ENST00000363782 126 ntBASIC-0.03□□□□□ -2.41
IGKV3D-15A0A087WSY6 SNORD49B-201ENST00000365172 72 ntBASIC-0.03□□□□□ -2.41
IGKV3D-15A0A087WSY6 RNU6-788P-201ENST00000390967 104 ntBASIC-0.03□□□□□ -2.41
IGKV3D-15A0A087WSY6 RNA5SP470-201ENST00000516463 106 ntBASIC-0.03□□□□□ -2.41
IGKV3D-15A0A087WSY6 MIR4768-201ENST00000585270 74 ntBASIC-0.03□□□□□ -2.41
IGKV3D-15A0A087WSY6 RNU6-92P-201ENST00000605893 104 ntBASIC-0.03□□□□□ -2.41
IGKV3D-15A0A087WSY6 AL445584.3-201ENST00000617173 78 ntBASIC-0.03□□□□□ -2.41
IGKV3D-15A0A087WSY6 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
IGKV3D-15A0A087WSY6 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.04□□□□□ -2.42
IGKV3D-15A0A087WSY6 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.05□□□□□ -2.42
IGKV3D-15A0A087WSY6 MIR1197-201ENST00000408818 88 ntBASIC-0.05□□□□□ -2.42
IGKV3D-15A0A087WSY6 MIR6779-201ENST00000617283 64 ntBASIC-0.05□□□□□ -2.42
IGKV3D-15A0A087WSY6 RNU6-302P-201ENST00000365249 107 ntBASIC-0.06□□□□□ -2.42
IGKV3D-15A0A087WSY6 RNU6-669P-201ENST00000365575 107 ntBASIC-0.06□□□□□ -2.42
IGKV3D-15A0A087WSY6 RNU6-46P-201ENST00000383860 107 ntBASIC-0.06□□□□□ -2.42
IGKV3D-15A0A087WSY6 AL445193.1-201ENST00000441183 141 ntBASIC-0.06□□□□□ -2.42
IGKV3D-15A0A087WSY6 MIR5190-201ENST00000581537 80 ntBASIC-0.06□□□□□ -2.42
IGKV3D-15A0A087WSY6 snoR1.1-201ENST00000628177 80 ntBASIC-0.06□□□□□ -2.42
IGKV3D-15A0A087WSY6 SNORD116-16-201ENST00000384533 92 ntBASIC-0.07□□□□□ -2.42
IGKV3D-15A0A087WSY6 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.07□□□□□ -2.42
IGKV3D-15A0A087WSY6 SNORD38.3-201ENST00000516599 73 ntBASIC-0.07□□□□□ -2.42
IGKV3D-15A0A087WSY6 AC108676.2-201ENST00000605225 163 ntBASIC-0.07□□□□□ -2.42
IGKV3D-15A0A087WSY6 RNU6-458P-201ENST00000384179 107 ntBASIC-0.08□□□□□ -2.42
IGKV3D-15A0A087WSY6 MIR527-201ENST00000385244 85 ntBASIC-0.08□□□□□ -2.42
IGKV3D-15A0A087WSY6 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
IGKV3D-15A0A087WSY6 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
IGKV3D-15A0A087WSY6 AC125388.1-201ENST00000459631 156 ntBASIC-0.08□□□□□ -2.42
IGKV3D-15A0A087WSY6 RNU6-122P-201ENST00000516818 107 ntBASIC-0.08□□□□□ -2.42
IGKV3D-15A0A087WSY6 RNA5SP169-201ENST00000517268 117 ntBASIC-0.08□□□□□ -2.42
IGKV3D-15A0A087WSY6 U6.58-201ENST00000613107 107 ntBASIC-0.08□□□□□ -2.42
IGKV3D-15A0A087WSY6 MIR6854-201ENST00000614935 69 ntBASIC-0.08□□□□□ -2.42
IGKV3D-15A0A087WSY6 SNORD114-11-201ENST00000363738 75 ntBASIC-0.09□□□□□ -2.42
IGKV3D-15A0A087WSY6 SNORD114-12-201ENST00000365400 75 ntBASIC-0.09□□□□□ -2.42
IGKV3D-15A0A087WSY6 MIR2909-201ENST00000617113 69 ntBASIC-0.09□□□□□ -2.42
IGKV3D-15A0A087WSY6 RNU6-446P-201ENST00000362827 106 ntBASIC-0.1□□□□□ -2.43
IGKV3D-15A0A087WSY6 SNORD1B-201ENST00000363091 84 ntBASIC-0.1□□□□□ -2.43
IGKV3D-15A0A087WSY6 RNU6-598P-201ENST00000364017 105 ntBASIC-0.1□□□□□ -2.43
IGKV3D-15A0A087WSY6 RNU6-901P-201ENST00000384593 106 ntBASIC-0.1□□□□□ -2.43
IGKV3D-15A0A087WSY6 MIR466-201ENST00000580653 84 ntBASIC-0.1□□□□□ -2.43
IGKV3D-15A0A087WSY6 MIR6851-201ENST00000617060 67 ntBASIC-0.1□□□□□ -2.43
IGKV3D-15A0A087WSY6 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.1□□□□□ -2.43
IGKV3D-15A0A087WSY6 RNA5SP457-201ENST00000363657 124 ntBASIC-0.11□□□□□ -2.43
IGKV3D-15A0A087WSY6 MIR124-2-201ENST00000385081 109 ntBASIC-0.11□□□□□ -2.43
IGKV3D-15A0A087WSY6 U7.5-201ENST00000517224 61 ntBASIC-0.11□□□□□ -2.43
IGKV3D-15A0A087WSY6 U2.18-201ENST00000622185 84 ntBASIC-0.11□□□□□ -2.43
IGKV3D-15A0A087WSY6 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.12□□□□□ -2.43
IGKV3D-15A0A087WSY6 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.12□□□□□ -2.43
IGKV3D-15A0A087WSY6 MIR633-201ENST00000384821 98 ntBASIC-0.12□□□□□ -2.43
IGKV3D-15A0A087WSY6 RNU7-88P-201ENST00000458752 63 ntBASIC-0.12□□□□□ -2.43
IGKV3D-15A0A087WSY6 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.13□□□□□ -2.43
IGKV3D-15A0A087WSY6 SNORA18.1-201ENST00000363418 128 ntBASIC-0.13□□□□□ -2.43
IGKV3D-15A0A087WSY6 SNORA62.4-201ENST00000365504 151 ntBASIC-0.13□□□□□ -2.43
IGKV3D-15A0A087WSY6 SNORD4A-201ENST00000459174 72 ntBASIC-0.13□□□□□ -2.43
IGKV3D-15A0A087WSY6 RNA5SP66-201ENST00000517178 101 ntBASIC-0.13□□□□□ -2.43
IGKV3D-15A0A087WSY6 MIR371B-201ENST00000638082 66 ntBASIC-0.14□□□□□ -2.43
IGKV3D-15A0A087WSY6 RNU6-940P-201ENST00000363433 104 ntBASIC-0.15□□□□□ -2.43
IGKV3D-15A0A087WSY6 SNORA32.1-201ENST00000364514 115 ntBASIC-0.15□□□□□ -2.43
IGKV3D-15A0A087WSY6 RNA5SP300-201ENST00000391197 107 ntBASIC-0.15□□□□□ -2.43
IGKV3D-15A0A087WSY6 AC104692.1-201ENST00000472406 90 ntBASIC-0.15□□□□□ -2.43
IGKV3D-15A0A087WSY6 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.15□□□□□ -2.43
IGKV3D-15A0A087WSY6 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.15□□□□□ -2.43
IGKV3D-15A0A087WSY6 MIR3666-201ENST00000607845 111 ntBASIC-0.15□□□□□ -2.43
IGKV3D-15A0A087WSY6 RNU6-829P-201ENST00000363700 112 ntBASIC-0.16□□□□□ -2.44
IGKV3D-15A0A087WSY6 SNORD113-4-201ENST00000364802 75 ntBASIC-0.16□□□□□ -2.44
IGKV3D-15A0A087WSY6 RNU6-231P-201ENST00000517122 103 ntBASIC-0.16□□□□□ -2.44
IGKV3D-15A0A087WSY6 MIR3938-201ENST00000582157 103 ntBASIC-0.16□□□□□ -2.44
IGKV3D-15A0A087WSY6 MIR4788-201ENST00000639104 80 ntBASIC-0.16□□□□□ -2.44
IGKV3D-15A0A087WSY6 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.17□□□□□ -2.44
IGKV3D-15A0A087WSY6 SNORD22.1-201ENST00000516331 125 ntBASIC-0.17□□□□□ -2.44
IGKV3D-15A0A087WSY6 SNORD19-201ENST00000391191 68 ntBASIC-0.18□□□□□ -2.44
IGKV3D-15A0A087WSY6 RNU6-721P-201ENST00000410155 105 ntBASIC-0.18□□□□□ -2.44
IGKV3D-15A0A087WSY6 RNU6-172P-201ENST00000411000 93 ntBASIC-0.18□□□□□ -2.44
IGKV3D-15A0A087WSY6 AP002795.1-201ENST00000534879 84 ntBASIC-0.18□□□□□ -2.44
IGKV3D-15A0A087WSY6 MIR1295B-201ENST00000636144 60 ntBASIC-0.18□□□□□ -2.44
IGKV3D-15A0A087WSY6 AC093726.3-201ENST00000637588 150 ntBASIC-0.18□□□□□ -2.44
IGKV3D-15A0A087WSY6 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.19□□□□□ -2.44
IGKV3D-15A0A087WSY6 SNORA40.16-201ENST00000517238 121 ntBASIC-0.19□□□□□ -2.44
IGKV3D-15A0A087WSY6 MIR579-201ENST00000385221 98 ntBASIC-0.2□□□□□ -2.44
IGKV3D-15A0A087WSY6 RNU6-696P-201ENST00000390834 107 ntBASIC-0.2□□□□□ -2.44
IGKV3D-15A0A087WSY6 AC079150.2-201ENST00000443733 78 ntBASIC-0.2□□□□□ -2.44
IGKV3D-15A0A087WSY6 SNORD57-201ENST00000448188 72 ntBASIC-0.2□□□□□ -2.44
IGKV3D-15A0A087WSY6 RNU6-732P-201ENST00000516033 103 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 257.8 ms