Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RNU7-160P-201ENST00000516660 62 ntBASIC1.25□□□□□ -2.21
PCDHB3Q9Y5E6 MIR6734-201ENST00000621166 68 ntBASIC1.25□□□□□ -2.21
PCDHB3Q9Y5E6 U2.18-201ENST00000622185 84 ntBASIC1.25□□□□□ -2.21
PCDHB3Q9Y5E6 MIR501-201ENST00000390204 84 ntBASIC1.24□□□□□ -2.21
PCDHB3Q9Y5E6 RNU6-1206P-201ENST00000516339 103 ntBASIC1.24□□□□□ -2.21
PCDHB3Q9Y5E6 RNU7-151P-201ENST00000516930 53 ntBASIC1.24□□□□□ -2.21
PCDHB3Q9Y5E6 SNORA40.8-201ENST00000411034 126 ntBASIC1.23□□□□□ -2.21
PCDHB3Q9Y5E6 Y_RNA.69-201ENST00000362885 109 ntBASIC1.22□□□□□ -2.21
PCDHB3Q9Y5E6 AL353803.5-201ENST00000599815 141 ntBASIC1.22□□□□□ -2.21
PCDHB3Q9Y5E6 MIR4661-201ENST00000582720 75 ntBASIC1.21□□□□□ -2.22
PCDHB3Q9Y5E6 AC084368.1-201ENST00000620935 65 ntBASIC1.21□□□□□ -2.22
PCDHB3Q9Y5E6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
PCDHB3Q9Y5E6 SNORD114-22-201ENST00000365423 72 ntBASIC1.2□□□□□ -2.22
PCDHB3Q9Y5E6 MIR489-201ENST00000384923 84 ntBASIC1.2□□□□□ -2.22
PCDHB3Q9Y5E6 MIR6755-201ENST00000619993 66 ntBASIC1.2□□□□□ -2.22
PCDHB3Q9Y5E6 RN7SL660P-201ENST00000614852 299 ntBASIC1.19□□□□□ -2.22
PCDHB3Q9Y5E6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.18□□□□□ -2.22
PCDHB3Q9Y5E6 OR2A41P-201ENST00000473586 105 ntBASIC1.18□□□□□ -2.22
PCDHB3Q9Y5E6 RNU4-54P-201ENST00000516428 129 ntBASIC1.18□□□□□ -2.22
PCDHB3Q9Y5E6 SNORD115-23-201ENST00000364461 82 ntBASIC1.17□□□□□ -2.22
PCDHB3Q9Y5E6 SNORD71-201ENST00000411292 86 ntBASIC1.17□□□□□ -2.22
PCDHB3Q9Y5E6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
PCDHB3Q9Y5E6 MIR518A1-201ENST00000385068 85 ntBASIC1.16□□□□□ -2.22
PCDHB3Q9Y5E6 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
PCDHB3Q9Y5E6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
PCDHB3Q9Y5E6 MIR329-2-201ENST00000385029 84 ntBASIC1.15□□□□□ -2.23
PCDHB3Q9Y5E6 RNU6-848P-201ENST00000515948 107 ntBASIC1.15□□□□□ -2.23
PCDHB3Q9Y5E6 RNU6-617P-201ENST00000516147 107 ntBASIC1.15□□□□□ -2.23
PCDHB3Q9Y5E6 RNU6-473P-201ENST00000516164 107 ntBASIC1.15□□□□□ -2.23
PCDHB3Q9Y5E6 RNU6-1262P-201ENST00000516217 96 ntBASIC1.15□□□□□ -2.23
PCDHB3Q9Y5E6 RNU6-1049P-201ENST00000516414 107 ntBASIC1.15□□□□□ -2.23
PCDHB3Q9Y5E6 MIR4295-201ENST00000585286 85 ntBASIC1.15□□□□□ -2.23
PCDHB3Q9Y5E6 MIR760-201ENST00000390220 80 ntBASIC1.14□□□□□ -2.23
PCDHB3Q9Y5E6 AC108676.2-201ENST00000605225 163 ntBASIC1.14□□□□□ -2.23
PCDHB3Q9Y5E6 MIR548AA1-201ENST00000384971 97 ntBASIC1.13□□□□□ -2.23
PCDHB3Q9Y5E6 RNU6-995P-201ENST00000391244 107 ntBASIC1.13□□□□□ -2.23
PCDHB3Q9Y5E6 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
PCDHB3Q9Y5E6 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.13□□□□□ -2.23
PCDHB3Q9Y5E6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.13□□□□□ -2.23
PCDHB3Q9Y5E6 MIR4432-201ENST00000581823 84 ntBASIC1.13□□□□□ -2.23
PCDHB3Q9Y5E6 MIR3925-201ENST00000584674 77 ntBASIC1.13□□□□□ -2.23
PCDHB3Q9Y5E6 RNU6-828P-201ENST00000364876 107 ntBASIC1.12□□□□□ -2.23
PCDHB3Q9Y5E6 MIR608-201ENST00000384820 100 ntBASIC1.12□□□□□ -2.23
PCDHB3Q9Y5E6 MIR125B1-201ENST00000385236 88 ntBASIC1.12□□□□□ -2.23
PCDHB3Q9Y5E6 RNU6-696P-201ENST00000390834 107 ntBASIC1.12□□□□□ -2.23
PCDHB3Q9Y5E6 MIR876-201ENST00000401147 81 ntBASIC1.12□□□□□ -2.23
PCDHB3Q9Y5E6 Y_RNA.698-201ENST00000516798 118 ntBASIC1.12□□□□□ -2.23
PCDHB3Q9Y5E6 MIR548AL-201ENST00000578416 97 ntBASIC1.12□□□□□ -2.23
PCDHB3Q9Y5E6 RNU6-986P-201ENST00000363133 102 ntBASIC1.11□□□□□ -2.23
PCDHB3Q9Y5E6 AP000676.1-201ENST00000533307 52 ntBASIC1.11□□□□□ -2.23
PCDHB3Q9Y5E6 MIR96-201ENST00000362288 78 ntBASIC1.1□□□□□ -2.23
PCDHB3Q9Y5E6 AL451105.1-201ENST00000450005 189 ntBASIC1.1□□□□□ -2.23
PCDHB3Q9Y5E6 SNORD114-27-201ENST00000363766 70 ntBASIC1.09□□□□□ -2.23
PCDHB3Q9Y5E6 RNU1-93P-201ENST00000364704 169 ntBASIC1.09□□□□□ -2.23
PCDHB3Q9Y5E6 RNA5SP128-201ENST00000365305 116 ntBASIC1.09□□□□□ -2.23
PCDHB3Q9Y5E6 RNU6-1267P-201ENST00000410747 107 ntBASIC1.08□□□□□ -2.24
PCDHB3Q9Y5E6 AC098934.3-201ENST00000430450 190 ntBASIC1.08□□□□□ -2.24
PCDHB3Q9Y5E6 MIR520E-201ENST00000384867 87 ntBASIC1.07□□□□□ -2.24
PCDHB3Q9Y5E6 MIR106A-201ENST00000384870 81 ntBASIC1.07□□□□□ -2.24
PCDHB3Q9Y5E6 RNU6-1250P-201ENST00000391218 107 ntBASIC1.07□□□□□ -2.24
PCDHB3Q9Y5E6 RNU6-1223P-201ENST00000517124 104 ntBASIC1.07□□□□□ -2.24
PCDHB3Q9Y5E6 MIR6515-201ENST00000619843 57 ntBASIC1.07□□□□□ -2.24
PCDHB3Q9Y5E6 snoR1.1-201ENST00000628177 80 ntBASIC1.07□□□□□ -2.24
PCDHB3Q9Y5E6 MIR499B-201ENST00000636498 73 ntBASIC1.07□□□□□ -2.24
PCDHB3Q9Y5E6 RPS29P1-201ENST00000465274 159 ntBASIC1.06□□□□□ -2.24
PCDHB3Q9Y5E6 U7.5-201ENST00000517224 61 ntBASIC1.06□□□□□ -2.24
PCDHB3Q9Y5E6 SNORD57-201ENST00000448188 72 ntBASIC1.05□□□□□ -2.24
PCDHB3Q9Y5E6 MIR151B-201ENST00000584249 96 ntBASIC1.05□□□□□ -2.24
PCDHB3Q9Y5E6 AL590095.2-201ENST00000604136 117 ntBASIC1.05□□□□□ -2.24
PCDHB3Q9Y5E6 MIR6788-201ENST00000618842 66 ntBASIC1.05□□□□□ -2.24
PCDHB3Q9Y5E6 Y_RNA.139-201ENST00000363464 102 ntBASIC1.04□□□□□ -2.24
PCDHB3Q9Y5E6 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.04□□□□□ -2.24
PCDHB3Q9Y5E6 RNU7-88P-201ENST00000458752 63 ntBASIC1.04□□□□□ -2.24
PCDHB3Q9Y5E6 RNU7-129P-201ENST00000516128 62 ntBASIC1.04□□□□□ -2.24
PCDHB3Q9Y5E6 RNU6-945P-201ENST00000383947 107 ntBASIC1.03□□□□□ -2.24
PCDHB3Q9Y5E6 SCARNA11.2-201ENST00000517183 154 ntBASIC1.03□□□□□ -2.24
PCDHB3Q9Y5E6 MIR4464-201ENST00000580818 92 ntBASIC1.03□□□□□ -2.24
PCDHB3Q9Y5E6 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
PCDHB3Q9Y5E6 AC022709.1-201ENST00000615967 87 ntBASIC1.03□□□□□ -2.24
PCDHB3Q9Y5E6 MIR6888-201ENST00000621977 67 ntBASIC1.03□□□□□ -2.24
PCDHB3Q9Y5E6 RNU6-110P-201ENST00000384508 104 ntBASIC1.02□□□□□ -2.25
PCDHB3Q9Y5E6 MIR548J-201ENST00000408833 112 ntBASIC1.01□□□□□ -2.25
PCDHB3Q9Y5E6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1□□□□□ -2.25
PCDHB3Q9Y5E6 RNU6-1174P-201ENST00000517278 101 ntBASIC1□□□□□ -2.25
PCDHB3Q9Y5E6 AC211469.2-201ENST00000605461 205 ntBASIC1□□□□□ -2.25
PCDHB3Q9Y5E6 AL445584.3-201ENST00000617173 78 ntBASIC0.99□□□□□ -2.25
PCDHB3Q9Y5E6 RNA5SP98-201ENST00000363158 137 ntBASIC0.98□□□□□ -2.25
PCDHB3Q9Y5E6 RNU6-974P-201ENST00000384099 108 ntBASIC0.98□□□□□ -2.25
PCDHB3Q9Y5E6 SNORD63.1-201ENST00000516178 80 ntBASIC0.98□□□□□ -2.25
PCDHB3Q9Y5E6 SNORD114-21-201ENST00000606412 72 ntBASIC0.98□□□□□ -2.25
PCDHB3Q9Y5E6 MIR6857-201ENST00000613267 93 ntBASIC0.98□□□□□ -2.25
PCDHB3Q9Y5E6 MIR6767-201ENST00000637302 66 ntBASIC0.98□□□□□ -2.25
PCDHB3Q9Y5E6 MIR598-201ENST00000384868 97 ntBASIC0.97□□□□□ -2.25
PCDHB3Q9Y5E6 RNU6-724P-201ENST00000390958 105 ntBASIC0.97□□□□□ -2.25
PCDHB3Q9Y5E6 RNU6-863P-201ENST00000515989 104 ntBASIC0.97□□□□□ -2.25
PCDHB3Q9Y5E6 RNA5SP480-201ENST00000516840 109 ntBASIC0.97□□□□□ -2.25
PCDHB3Q9Y5E6 uc_338.36-201ENST00000622331 158 ntBASIC0.97□□□□□ -2.25
PCDHB3Q9Y5E6 RNU6-1204P-201ENST00000363948 107 ntBASIC0.96□□□□□ -2.26
PCDHB3Q9Y5E6 MTRNR2L9-201ENST00000622562 75 ntBASIC0.96□□□□□ -2.26
PCDHB3Q9Y5E6 AL391099.1-201ENST00000624635 187 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms