Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RNU7-188P-201ENST00000517063 64 ntBASIC1.5□□□□□ -2.17
PHF8Q9UPP1 Y_RNA.109-201ENST00000363215 102 ntBASIC1.49□□□□□ -2.17
PHF8Q9UPP1 SNORA36.2-201ENST00000384004 127 ntBASIC1.49□□□□□ -2.17
PHF8Q9UPP1 MIRLET7B-201ENST00000385140 83 ntBASIC1.49□□□□□ -2.17
PHF8Q9UPP1 SNORA49-201ENST00000386157 136 ntBASIC1.49□□□□□ -2.17
PHF8Q9UPP1 RNU6-229P-201ENST00000516614 102 ntBASIC1.49□□□□□ -2.17
PHF8Q9UPP1 SNORD118-201ENST00000363593 134 ntBASIC1.48□□□□□ -2.17
PHF8Q9UPP1 RNU6-848P-201ENST00000515948 107 ntBASIC1.48□□□□□ -2.17
PHF8Q9UPP1 RNU6-617P-201ENST00000516147 107 ntBASIC1.48□□□□□ -2.17
PHF8Q9UPP1 RNU6-473P-201ENST00000516164 107 ntBASIC1.48□□□□□ -2.17
PHF8Q9UPP1 RNU6-1049P-201ENST00000516414 107 ntBASIC1.48□□□□□ -2.17
PHF8Q9UPP1 MIR4661-201ENST00000582720 75 ntBASIC1.48□□□□□ -2.17
PHF8Q9UPP1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.47□□□□□ -2.17
PHF8Q9UPP1 MIR5000-201ENST00000577717 103 ntBASIC1.47□□□□□ -2.17
PHF8Q9UPP1 SNORA40.8-201ENST00000411034 126 ntBASIC1.46□□□□□ -2.18
PHF8Q9UPP1 MIR548AG1-201ENST00000579932 66 ntBASIC1.46□□□□□ -2.18
PHF8Q9UPP1 SNORA25.18-201ENST00000607153 114 ntBASIC1.46□□□□□ -2.18
PHF8Q9UPP1 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.46□□□□□ -2.18
PHF8Q9UPP1 RNU6-458P-201ENST00000384179 107 ntBASIC1.45□□□□□ -2.18
PHF8Q9UPP1 RNU6-175P-201ENST00000516896 107 ntBASIC1.45□□□□□ -2.18
PHF8Q9UPP1 AC211469.2-201ENST00000605461 205 ntBASIC1.45□□□□□ -2.18
PHF8Q9UPP1 U6.58-201ENST00000613107 107 ntBASIC1.45□□□□□ -2.18
PHF8Q9UPP1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
PHF8Q9UPP1 MIR548F3-201ENST00000408509 87 ntBASIC1.44□□□□□ -2.18
PHF8Q9UPP1 SNORD114-21-201ENST00000606412 72 ntBASIC1.44□□□□□ -2.18
PHF8Q9UPP1 RNU6-502P-201ENST00000362419 108 ntBASIC1.43□□□□□ -2.18
PHF8Q9UPP1 MIR4677-201ENST00000584153 80 ntBASIC1.43□□□□□ -2.18
PHF8Q9UPP1 SNORD71-201ENST00000411292 86 ntBASIC1.42□□□□□ -2.18
PHF8Q9UPP1 ACA64.5-201ENST00000516207 127 ntBASIC1.42□□□□□ -2.18
PHF8Q9UPP1 RNU6-419P-201ENST00000517030 63 ntBASIC1.42□□□□□ -2.18
PHF8Q9UPP1 MIR3973-201ENST00000579824 107 ntBASIC1.42□□□□□ -2.18
PHF8Q9UPP1 RNU6-838P-201ENST00000363399 108 ntBASIC1.41□□□□□ -2.18
PHF8Q9UPP1 MIR4490-201ENST00000582647 84 ntBASIC1.41□□□□□ -2.18
PHF8Q9UPP1 RNU7-160P-201ENST00000516660 62 ntBASIC1.4□□□□□ -2.19
PHF8Q9UPP1 RNU6-782P-201ENST00000516852 104 ntBASIC1.4□□□□□ -2.19
PHF8Q9UPP1 CYP3A137P-201ENST00000562436 69 ntBASIC1.4□□□□□ -2.19
PHF8Q9UPP1 AC084368.1-201ENST00000620935 65 ntBASIC1.4□□□□□ -2.19
PHF8Q9UPP1 RNU4-38P-201ENST00000364472 129 ntBASIC1.39□□□□□ -2.19
PHF8Q9UPP1 RNU6-1036P-201ENST00000383959 104 ntBASIC1.39□□□□□ -2.19
PHF8Q9UPP1 Y_RNA.423-201ENST00000384057 113 ntBASIC1.39□□□□□ -2.19
PHF8Q9UPP1 MIR532-201ENST00000385025 91 ntBASIC1.38□□□□□ -2.19
PHF8Q9UPP1 MIR501-201ENST00000390204 84 ntBASIC1.37□□□□□ -2.19
PHF8Q9UPP1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
PHF8Q9UPP1 MIR6857-201ENST00000613267 93 ntBASIC1.36□□□□□ -2.19
PHF8Q9UPP1 MIR608-201ENST00000384820 100 ntBASIC1.35□□□□□ -2.19
PHF8Q9UPP1 MIR518A1-201ENST00000385068 85 ntBASIC1.35□□□□□ -2.19
PHF8Q9UPP1 RNU6-1232P-201ENST00000516299 86 ntBASIC1.34□□□□□ -2.19
PHF8Q9UPP1 RNU6-247P-201ENST00000362636 107 ntBASIC1.33□□□□□ -2.2
PHF8Q9UPP1 RN7SL793P-201ENST00000583259 296 ntBASIC1.33□□□□□ -2.2
PHF8Q9UPP1 AL353803.5-201ENST00000599815 141 ntBASIC1.33□□□□□ -2.2
PHF8Q9UPP1 AL590095.2-201ENST00000604136 117 ntBASIC1.33□□□□□ -2.2
PHF8Q9UPP1 RNU6-110P-201ENST00000384508 104 ntBASIC1.31□□□□□ -2.2
PHF8Q9UPP1 MIR6755-201ENST00000619993 66 ntBASIC1.31□□□□□ -2.2
PHF8Q9UPP1 MIR760-201ENST00000390220 80 ntBASIC1.3□□□□□ -2.2
PHF8Q9UPP1 RNU6-1206P-201ENST00000516339 103 ntBASIC1.3□□□□□ -2.2
PHF8Q9UPP1 RNU6-598P-201ENST00000364017 105 ntBASIC1.29□□□□□ -2.2
PHF8Q9UPP1 MIR876-201ENST00000401147 81 ntBASIC1.29□□□□□ -2.2
PHF8Q9UPP1 MIR4698-201ENST00000577795 80 ntBASIC1.29□□□□□ -2.2
PHF8Q9UPP1 RN7SL660P-201ENST00000614852 299 ntBASIC1.29□□□□□ -2.2
PHF8Q9UPP1 MIR1285-1-201ENST00000408593 84 ntBASIC1.28□□□□□ -2.2
PHF8Q9UPP1 SNORD115-23-201ENST00000364461 82 ntBASIC1.27□□□□□ -2.21
PHF8Q9UPP1 AC098934.3-201ENST00000430450 190 ntBASIC1.27□□□□□ -2.21
PHF8Q9UPP1 RNU6-863P-201ENST00000515989 104 ntBASIC1.27□□□□□ -2.21
PHF8Q9UPP1 RNU7-151P-201ENST00000516930 53 ntBASIC1.27□□□□□ -2.21
PHF8Q9UPP1 RNA5SP128-201ENST00000365305 116 ntBASIC1.26□□□□□ -2.21
PHF8Q9UPP1 MIR106A-201ENST00000384870 81 ntBASIC1.26□□□□□ -2.21
PHF8Q9UPP1 MIR216A-201ENST00000385063 110 ntBASIC1.26□□□□□ -2.21
PHF8Q9UPP1 MIR579-201ENST00000385221 98 ntBASIC1.26□□□□□ -2.21
PHF8Q9UPP1 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.26□□□□□ -2.21
PHF8Q9UPP1 RNU4-54P-201ENST00000516428 129 ntBASIC1.26□□□□□ -2.21
PHF8Q9UPP1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.26□□□□□ -2.21
PHF8Q9UPP1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
PHF8Q9UPP1 Y_RNA.69-201ENST00000362885 109 ntBASIC1.25□□□□□ -2.21
PHF8Q9UPP1 MIR4714-201ENST00000580728 77 ntBASIC1.25□□□□□ -2.21
PHF8Q9UPP1 U2.18-201ENST00000622185 84 ntBASIC1.25□□□□□ -2.21
PHF8Q9UPP1 MIR548AA1-201ENST00000384971 97 ntBASIC1.24□□□□□ -2.21
PHF8Q9UPP1 MIR545-201ENST00000385085 106 ntBASIC1.24□□□□□ -2.21
PHF8Q9UPP1 RNU6-995P-201ENST00000391244 107 ntBASIC1.24□□□□□ -2.21
PHF8Q9UPP1 OR2A41P-201ENST00000473586 105 ntBASIC1.24□□□□□ -2.21
PHF8Q9UPP1 AC108676.2-201ENST00000605225 163 ntBASIC1.24□□□□□ -2.21
PHF8Q9UPP1 MIR3925-201ENST00000584674 77 ntBASIC1.23□□□□□ -2.21
PHF8Q9UPP1 snoR1.1-201ENST00000628177 80 ntBASIC1.23□□□□□ -2.21
PHF8Q9UPP1 RNU6-828P-201ENST00000364876 107 ntBASIC1.21□□□□□ -2.22
PHF8Q9UPP1 MIR329-2-201ENST00000385029 84 ntBASIC1.21□□□□□ -2.22
PHF8Q9UPP1 RNU6-696P-201ENST00000390834 107 ntBASIC1.21□□□□□ -2.22
PHF8Q9UPP1 RNU6-1262P-201ENST00000516217 96 ntBASIC1.21□□□□□ -2.22
PHF8Q9UPP1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
PHF8Q9UPP1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
PHF8Q9UPP1 RNU6-924P-201ENST00000362926 108 ntBASIC1.2□□□□□ -2.22
PHF8Q9UPP1 AP000676.1-201ENST00000533307 52 ntBASIC1.2□□□□□ -2.22
PHF8Q9UPP1 MIR4432-201ENST00000581823 84 ntBASIC1.19□□□□□ -2.22
PHF8Q9UPP1 Y_RNA.374-201ENST00000365606 101 ntBASIC1.16□□□□□ -2.22
PHF8Q9UPP1 MIR125B1-201ENST00000385236 88 ntBASIC1.16□□□□□ -2.22
PHF8Q9UPP1 MIR499B-201ENST00000636498 73 ntBASIC1.16□□□□□ -2.22
PHF8Q9UPP1 AL451105.1-201ENST00000450005 189 ntBASIC1.15□□□□□ -2.23
PHF8Q9UPP1 SCARNA11.2-201ENST00000517183 154 ntBASIC1.15□□□□□ -2.23
PHF8Q9UPP1 RNA5SP98-201ENST00000363158 137 ntBASIC1.14□□□□□ -2.23
PHF8Q9UPP1 RNU7-129P-201ENST00000516128 62 ntBASIC1.14□□□□□ -2.23
PHF8Q9UPP1 MIR6513-201ENST00000621188 64 ntBASIC1.14□□□□□ -2.23
PHF8Q9UPP1 SNORA62.4-201ENST00000365504 151 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 239.5 ms