Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 RNU6-782P-201ENST00000516852 104 ntBASIC0.9□□□□□ -2.27
PCDHGC3Q9UN70 MIR3973-201ENST00000579824 107 ntBASIC0.9□□□□□ -2.27
PCDHGC3Q9UN70 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
PCDHGC3Q9UN70 RNU6-1184P-201ENST00000384588 108 ntBASIC0.89□□□□□ -2.27
PCDHGC3Q9UN70 RNU6-351P-201ENST00000516097 100 ntBASIC0.89□□□□□ -2.27
PCDHGC3Q9UN70 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.89□□□□□ -2.27
PCDHGC3Q9UN70 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
PCDHGC3Q9UN70 RNU6-1312P-201ENST00000362425 108 ntBASIC0.88□□□□□ -2.27
PCDHGC3Q9UN70 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
PCDHGC3Q9UN70 MIR106A-201ENST00000384870 81 ntBASIC0.88□□□□□ -2.27
PCDHGC3Q9UN70 RNU7-129P-201ENST00000516128 62 ntBASIC0.88□□□□□ -2.27
PCDHGC3Q9UN70 MIR7110-201ENST00000612638 86 ntBASIC0.88□□□□□ -2.27
PCDHGC3Q9UN70 RN7SL660P-201ENST00000614852 299 ntBASIC0.88□□□□□ -2.27
PCDHGC3Q9UN70 SNORD44.1-201ENST00000363202 61 ntBASIC0.87□□□□□ -2.27
PCDHGC3Q9UN70 RNU1-93P-201ENST00000364704 169 ntBASIC0.87□□□□□ -2.27
PCDHGC3Q9UN70 RPS29P1-201ENST00000465274 159 ntBASIC0.87□□□□□ -2.27
PCDHGC3Q9UN70 MIR4698-201ENST00000577795 80 ntBASIC0.87□□□□□ -2.27
PCDHGC3Q9UN70 MIR3925-201ENST00000584674 77 ntBASIC0.87□□□□□ -2.27
PCDHGC3Q9UN70 MIR499B-201ENST00000636498 73 ntBASIC0.87□□□□□ -2.27
PCDHGC3Q9UN70 RNU6-945P-201ENST00000383947 107 ntBASIC0.86□□□□□ -2.27
PCDHGC3Q9UN70 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
PCDHGC3Q9UN70 SCARNA11.2-201ENST00000517183 154 ntBASIC0.84□□□□□ -2.27
PCDHGC3Q9UN70 SNORD116.2-201ENST00000391251 93 ntBASIC0.83□□□□□ -2.28
PCDHGC3Q9UN70 MIR4452-201ENST00000583004 71 ntBASIC0.83□□□□□ -2.28
PCDHGC3Q9UN70 SNORD114-22-201ENST00000365423 72 ntBASIC0.82□□□□□ -2.28
PCDHGC3Q9UN70 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
PCDHGC3Q9UN70 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.82□□□□□ -2.28
PCDHGC3Q9UN70 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.82□□□□□ -2.28
PCDHGC3Q9UN70 RNA5SP121-201ENST00000516537 101 ntBASIC0.81□□□□□ -2.28
PCDHGC3Q9UN70 RNA5SP98-201ENST00000363158 137 ntBASIC0.8□□□□□ -2.28
PCDHGC3Q9UN70 Y_RNA.224-201ENST00000364308 111 ntBASIC0.8□□□□□ -2.28
PCDHGC3Q9UN70 uc_338.17-201ENST00000619633 179 ntBASIC0.8□□□□□ -2.28
PCDHGC3Q9UN70 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
PCDHGC3Q9UN70 AP000676.1-201ENST00000533307 52 ntBASIC0.79□□□□□ -2.28
PCDHGC3Q9UN70 AL353803.5-201ENST00000599815 141 ntBASIC0.79□□□□□ -2.28
PCDHGC3Q9UN70 snoR1.1-201ENST00000628177 80 ntBASIC0.79□□□□□ -2.28
PCDHGC3Q9UN70 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
PCDHGC3Q9UN70 RNU6-458P-201ENST00000384179 107 ntBASIC0.78□□□□□ -2.28
PCDHGC3Q9UN70 U6.58-201ENST00000613107 107 ntBASIC0.78□□□□□ -2.28
PCDHGC3Q9UN70 Y_RNA.109-201ENST00000363215 102 ntBASIC0.77□□□□□ -2.29
PCDHGC3Q9UN70 SNORD115-23-201ENST00000364461 82 ntBASIC0.76□□□□□ -2.29
PCDHGC3Q9UN70 Y_RNA.379-201ENST00000365653 102 ntBASIC0.76□□□□□ -2.29
PCDHGC3Q9UN70 AC108740.1-201ENST00000498629 225 ntBASIC0.76□□□□□ -2.29
PCDHGC3Q9UN70 MIR520E-201ENST00000384867 87 ntBASIC0.75□□□□□ -2.29
PCDHGC3Q9UN70 SNORD1B-201ENST00000363091 84 ntBASIC0.74□□□□□ -2.29
PCDHGC3Q9UN70 SNORA40B-201ENST00000385573 128 ntBASIC0.74□□□□□ -2.29
PCDHGC3Q9UN70 RNU6-172P-201ENST00000411000 93 ntBASIC0.74□□□□□ -2.29
PCDHGC3Q9UN70 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.74□□□□□ -2.29
PCDHGC3Q9UN70 SNORA40.16-201ENST00000517238 121 ntBASIC0.74□□□□□ -2.29
PCDHGC3Q9UN70 MIR548AG1-201ENST00000579932 66 ntBASIC0.74□□□□□ -2.29
PCDHGC3Q9UN70 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
PCDHGC3Q9UN70 SNORA68.3-201ENST00000515906 83 ntBASIC0.73□□□□□ -2.29
PCDHGC3Q9UN70 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.73□□□□□ -2.29
PCDHGC3Q9UN70 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
PCDHGC3Q9UN70 Y_RNA.355-201ENST00000365462 98 ntBASIC0.72□□□□□ -2.29
PCDHGC3Q9UN70 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.72□□□□□ -2.29
PCDHGC3Q9UN70 CYP3A137P-201ENST00000562436 69 ntBASIC0.72□□□□□ -2.29
PCDHGC3Q9UN70 MIR4432-201ENST00000581823 84 ntBASIC0.72□□□□□ -2.29
PCDHGC3Q9UN70 MIR6788-201ENST00000618842 66 ntBASIC0.72□□□□□ -2.29
PCDHGC3Q9UN70 MIRLET7D-201ENST00000362263 87 ntBASIC0.71□□□□□ -2.3
PCDHGC3Q9UN70 RNA5SP220-201ENST00000516298 104 ntBASIC0.71□□□□□ -2.3
PCDHGC3Q9UN70 MIR151B-201ENST00000584249 96 ntBASIC0.71□□□□□ -2.3
PCDHGC3Q9UN70 MIR103A1-201ENST00000362165 78 ntBASIC0.7□□□□□ -2.3
PCDHGC3Q9UN70 MIR216A-201ENST00000385063 110 ntBASIC0.7□□□□□ -2.3
PCDHGC3Q9UN70 RNU6-127P-201ENST00000390897 107 ntBASIC0.7□□□□□ -2.3
PCDHGC3Q9UN70 snoU13.18-201ENST00000459483 104 ntBASIC0.7□□□□□ -2.3
PCDHGC3Q9UN70 SNORA62.4-201ENST00000365504 151 ntBASIC0.69□□□□□ -2.3
PCDHGC3Q9UN70 RNU6-42P-201ENST00000384165 107 ntBASIC0.69□□□□□ -2.3
PCDHGC3Q9UN70 AC108676.2-201ENST00000605225 163 ntBASIC0.69□□□□□ -2.3
PCDHGC3Q9UN70 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.69□□□□□ -2.3
PCDHGC3Q9UN70 AC090625.1-201ENST00000357130 210 ntBASIC0.68□□□□□ -2.3
PCDHGC3Q9UN70 RNU6-810P-201ENST00000364001 107 ntBASIC0.68□□□□□ -2.3
PCDHGC3Q9UN70 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
PCDHGC3Q9UN70 MIR892B-201ENST00000401279 77 ntBASIC0.68□□□□□ -2.3
PCDHGC3Q9UN70 MIR548J-201ENST00000408833 112 ntBASIC0.68□□□□□ -2.3
PCDHGC3Q9UN70 RNU6-1133P-201ENST00000410963 100 ntBASIC0.68□□□□□ -2.3
PCDHGC3Q9UN70 RNU6-1223P-201ENST00000517124 104 ntBASIC0.68□□□□□ -2.3
PCDHGC3Q9UN70 RNA5SP62-201ENST00000363457 110 ntBASIC0.67□□□□□ -2.3
PCDHGC3Q9UN70 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
PCDHGC3Q9UN70 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.67□□□□□ -2.3
PCDHGC3Q9UN70 CR383656.4-201ENST00000546909 122 ntBASIC0.66□□□□□ -2.3
PCDHGC3Q9UN70 RNU6-815P-201ENST00000384080 113 ntBASIC0.65□□□□□ -2.31
PCDHGC3Q9UN70 RNU6-980P-201ENST00000516925 103 ntBASIC0.65□□□□□ -2.31
PCDHGC3Q9UN70 AC069113.3-201ENST00000521019 150 ntBASIC0.65□□□□□ -2.31
PCDHGC3Q9UN70 MIR548X-201ENST00000580069 75 ntBASIC0.65□□□□□ -2.31
PCDHGC3Q9UN70 AC022709.1-201ENST00000615967 87 ntBASIC0.65□□□□□ -2.31
PCDHGC3Q9UN70 RNU6-753P-201ENST00000363926 107 ntBASIC0.64□□□□□ -2.31
PCDHGC3Q9UN70 RNU6-900P-201ENST00000384498 102 ntBASIC0.64□□□□□ -2.31
PCDHGC3Q9UN70 RNU7-55P-201ENST00000459426 62 ntBASIC0.64□□□□□ -2.31
PCDHGC3Q9UN70 RNU7-160P-201ENST00000516660 62 ntBASIC0.64□□□□□ -2.31
PCDHGC3Q9UN70 MIR6734-201ENST00000621166 68 ntBASIC0.64□□□□□ -2.31
PCDHGC3Q9UN70 MIR6514-201ENST00000622549 70 ntBASIC0.64□□□□□ -2.31
PCDHGC3Q9UN70 AL391099.1-201ENST00000624635 187 ntBASIC0.64□□□□□ -2.31
PCDHGC3Q9UN70 RNU4-33P-201ENST00000364316 85 ntBASIC0.63□□□□□ -2.31
PCDHGC3Q9UN70 RNU6-973P-201ENST00000364690 107 ntBASIC0.63□□□□□ -2.31
PCDHGC3Q9UN70 MIR4714-201ENST00000580728 77 ntBASIC0.63□□□□□ -2.31
PCDHGC3Q9UN70 MIR148A-201ENST00000362215 68 ntBASIC0.62□□□□□ -2.31
PCDHGC3Q9UN70 Y_RNA.118-201ENST00000363300 101 ntBASIC0.62□□□□□ -2.31
PCDHGC3Q9UN70 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
PCDHGC3Q9UN70 MIR5000-201ENST00000577717 103 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 236.3 ms