Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 MIR1827-201ENST00000408549 66 ntBASIC1.43□□□□□ -2.18
COL17A1Q9UMD9 RNU6-721P-201ENST00000410155 105 ntBASIC1.43□□□□□ -2.18
COL17A1Q9UMD9 RNU7-151P-201ENST00000516930 53 ntBASIC1.43□□□□□ -2.18
COL17A1Q9UMD9 AC002429.1-201ENST00000437672 148 ntBASIC1.43□□□□□ -2.18
COL17A1Q9UMD9 MIR4473-201ENST00000583731 91 ntBASIC1.43□□□□□ -2.18
COL17A1Q9UMD9 AC243829.6-201ENST00000612652 106 ntBASIC1.43□□□□□ -2.18
COL17A1Q9UMD9 MIR26B-201ENST00000362251 77 ntBASIC1.42□□□□□ -2.18
COL17A1Q9UMD9 MIR4711-201ENST00000578274 70 ntBASIC1.42□□□□□ -2.18
COL17A1Q9UMD9 U2.18-201ENST00000622185 84 ntBASIC1.42□□□□□ -2.18
COL17A1Q9UMD9 RNU6-458P-201ENST00000384179 107 ntBASIC1.41□□□□□ -2.18
COL17A1Q9UMD9 RNU6-469P-201ENST00000516253 101 ntBASIC1.41□□□□□ -2.18
COL17A1Q9UMD9 RNA5SP47-201ENST00000517230 109 ntBASIC1.41□□□□□ -2.18
COL17A1Q9UMD9 U6.58-201ENST00000613107 107 ntBASIC1.41□□□□□ -2.18
COL17A1Q9UMD9 AC243829.3-201ENST00000622177 108 ntBASIC1.41□□□□□ -2.18
COL17A1Q9UMD9 SNORD18A-201ENST00000363753 72 ntBASIC1.4□□□□□ -2.19
COL17A1Q9UMD9 RNU6-598P-201ENST00000364017 105 ntBASIC1.4□□□□□ -2.19
COL17A1Q9UMD9 MIR329-2-201ENST00000385029 84 ntBASIC1.4□□□□□ -2.19
COL17A1Q9UMD9 RNU6-1110P-201ENST00000516462 101 ntBASIC1.4□□□□□ -2.19
COL17A1Q9UMD9 RNU6-135P-201ENST00000516769 101 ntBASIC1.4□□□□□ -2.19
COL17A1Q9UMD9 AL627230.5-201ENST00000619807 58 ntBASIC1.4□□□□□ -2.19
COL17A1Q9UMD9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
COL17A1Q9UMD9 RNU6-742P-201ENST00000365289 107 ntBASIC1.39□□□□□ -2.19
COL17A1Q9UMD9 MIR200A-201ENST00000384875 90 ntBASIC1.39□□□□□ -2.19
COL17A1Q9UMD9 MIR1197-201ENST00000408818 88 ntBASIC1.39□□□□□ -2.19
COL17A1Q9UMD9 RNA5SP327-201ENST00000362494 101 ntBASIC1.38□□□□□ -2.19
COL17A1Q9UMD9 RNU6-939P-201ENST00000384634 107 ntBASIC1.38□□□□□ -2.19
COL17A1Q9UMD9 U7.7-201ENST00000459276 60 ntBASIC1.38□□□□□ -2.19
COL17A1Q9UMD9 RNU7-160P-201ENST00000516660 62 ntBASIC1.38□□□□□ -2.19
COL17A1Q9UMD9 AL451105.1-201ENST00000450005 189 ntBASIC1.37□□□□□ -2.19
COL17A1Q9UMD9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
COL17A1Q9UMD9 SNORD115-25-201ENST00000362619 82 ntBASIC1.37□□□□□ -2.19
COL17A1Q9UMD9 SNORD89-201ENST00000390981 114 ntBASIC1.37□□□□□ -2.19
COL17A1Q9UMD9 RNU6-337P-201ENST00000391243 106 ntBASIC1.36□□□□□ -2.19
COL17A1Q9UMD9 MIR3678-201ENST00000578455 94 ntBASIC1.36□□□□□ -2.19
COL17A1Q9UMD9 AC103810.9-201ENST00000606688 112 ntBASIC1.36□□□□□ -2.19
COL17A1Q9UMD9 AL162376.1-201ENST00000624117 175 ntBASIC1.36□□□□□ -2.19
COL17A1Q9UMD9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
COL17A1Q9UMD9 MIR429-201ENST00000362106 83 ntBASIC1.35□□□□□ -2.19
COL17A1Q9UMD9 RNU6-59P-201ENST00000384787 107 ntBASIC1.35□□□□□ -2.19
COL17A1Q9UMD9 AC025627.3-201ENST00000582078 182 ntBASIC1.35□□□□□ -2.19
COL17A1Q9UMD9 RNU6-945P-201ENST00000383947 107 ntBASIC1.34□□□□□ -2.19
COL17A1Q9UMD9 RNU6-974P-201ENST00000384099 108 ntBASIC1.34□□□□□ -2.19
COL17A1Q9UMD9 MIR19B1-201ENST00000384829 87 ntBASIC1.34□□□□□ -2.19
COL17A1Q9UMD9 SNORD105-201ENST00000386910 85 ntBASIC1.34□□□□□ -2.19
COL17A1Q9UMD9 SNORD110-201ENST00000408189 75 ntBASIC1.34□□□□□ -2.19
COL17A1Q9UMD9 MIR6086-201ENST00000638065 55 ntBASIC1.34□□□□□ -2.19
COL17A1Q9UMD9 AC006210.1-201ENST00000424882 111 ntBASIC1.33□□□□□ -2.2
COL17A1Q9UMD9 RNU6-828P-201ENST00000364876 107 ntBASIC1.32□□□□□ -2.2
COL17A1Q9UMD9 SNORD26-201ENST00000384147 75 ntBASIC1.32□□□□□ -2.2
COL17A1Q9UMD9 RNU7-154P-201ENST00000516194 62 ntBASIC1.32□□□□□ -2.2
COL17A1Q9UMD9 SCARNA16.5-201ENST00000517114 183 ntBASIC1.32□□□□□ -2.2
COL17A1Q9UMD9 MIR548H4-201ENST00000408689 111 ntBASIC1.31□□□□□ -2.2
COL17A1Q9UMD9 Y_RNA.139-201ENST00000363464 102 ntBASIC1.31□□□□□ -2.2
COL17A1Q9UMD9 SNORD114-24-201ENST00000365029 72 ntBASIC1.31□□□□□ -2.2
COL17A1Q9UMD9 RNU6-955P-201ENST00000410497 104 ntBASIC1.31□□□□□ -2.2
COL17A1Q9UMD9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.31□□□□□ -2.2
COL17A1Q9UMD9 MIR29B1-201ENST00000385015 81 ntBASIC1.3□□□□□ -2.2
COL17A1Q9UMD9 MIR125B1-201ENST00000385236 88 ntBASIC1.3□□□□□ -2.2
COL17A1Q9UMD9 RNU6-995P-201ENST00000391244 107 ntBASIC1.3□□□□□ -2.2
COL17A1Q9UMD9 RNU6-1262P-201ENST00000516217 96 ntBASIC1.3□□□□□ -2.2
COL17A1Q9UMD9 MIR6773-201ENST00000612812 74 ntBASIC1.3□□□□□ -2.2
COL17A1Q9UMD9 RNU6-1267P-201ENST00000410747 107 ntBASIC1.29□□□□□ -2.2
COL17A1Q9UMD9 RNA5SP227-201ENST00000516184 113 ntBASIC1.28□□□□□ -2.2
COL17A1Q9UMD9 MIR548AA1-201ENST00000384971 97 ntBASIC1.27□□□□□ -2.21
COL17A1Q9UMD9 MIR3612-201ENST00000579753 87 ntBASIC1.27□□□□□ -2.21
COL17A1Q9UMD9 SNORA70.25-201ENST00000612741 95 ntBASIC1.27□□□□□ -2.21
COL17A1Q9UMD9 Y_RNA.206-201ENST00000364136 102 ntBASIC1.26□□□□□ -2.21
COL17A1Q9UMD9 RNY1P8-201ENST00000383970 114 ntBASIC1.26□□□□□ -2.21
COL17A1Q9UMD9 AC244090.1-201ENST00000441884 93 ntBASIC1.26□□□□□ -2.21
COL17A1Q9UMD9 RNA5SP470-201ENST00000516463 106 ntBASIC1.26□□□□□ -2.21
COL17A1Q9UMD9 MIR6828-201ENST00000636181 60 ntBASIC1.26□□□□□ -2.21
COL17A1Q9UMD9 MIR20A-201ENST00000362279 71 ntBASIC1.25□□□□□ -2.21
COL17A1Q9UMD9 SNORD45.2-201ENST00000363552 72 ntBASIC1.24□□□□□ -2.21
COL17A1Q9UMD9 MIR618-201ENST00000385287 98 ntBASIC1.24□□□□□ -2.21
COL17A1Q9UMD9 HMGN2P22-201ENST00000427588 175 ntBASIC1.24□□□□□ -2.21
COL17A1Q9UMD9 MIR4752-201ENST00000579672 72 ntBASIC1.24□□□□□ -2.21
COL17A1Q9UMD9 SNORA36.1-201ENST00000363424 132 ntBASIC1.24□□□□□ -2.21
COL17A1Q9UMD9 RNU1-124P-201ENST00000363861 145 ntBASIC1.24□□□□□ -2.21
COL17A1Q9UMD9 SNORA49-201ENST00000386157 136 ntBASIC1.24□□□□□ -2.21
COL17A1Q9UMD9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.24□□□□□ -2.21
COL17A1Q9UMD9 SNORD124-201ENST00000459577 104 ntBASIC1.24□□□□□ -2.21
COL17A1Q9UMD9 RNA5SP404-201ENST00000517118 132 ntBASIC1.24□□□□□ -2.21
COL17A1Q9UMD9 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.24□□□□□ -2.21
COL17A1Q9UMD9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
COL17A1Q9UMD9 MIR508-201ENST00000384857 115 ntBASIC1.23□□□□□ -2.21
COL17A1Q9UMD9 MIRLET7B-201ENST00000385140 83 ntBASIC1.23□□□□□ -2.21
COL17A1Q9UMD9 MIR573-201ENST00000384964 99 ntBASIC1.22□□□□□ -2.21
COL17A1Q9UMD9 RNU6-530P-201ENST00000391180 107 ntBASIC1.22□□□□□ -2.21
COL17A1Q9UMD9 RNU6-782P-201ENST00000516852 104 ntBASIC1.22□□□□□ -2.21
COL17A1Q9UMD9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.21□□□□□ -2.22
COL17A1Q9UMD9 RNA5SP499-201ENST00000363982 119 ntBASIC1.21□□□□□ -2.22
COL17A1Q9UMD9 RNU4-45P-201ENST00000365469 141 ntBASIC1.21□□□□□ -2.22
COL17A1Q9UMD9 RNU6-1326P-201ENST00000391262 107 ntBASIC1.21□□□□□ -2.22
COL17A1Q9UMD9 SNORD111B-201ENST00000408587 80 ntBASIC1.21□□□□□ -2.22
COL17A1Q9UMD9 RNA5SP268-201ENST00000516828 124 ntBASIC1.21□□□□□ -2.22
COL17A1Q9UMD9 Y_RNA.345-201ENST00000365384 92 ntBASIC1.2□□□□□ -2.22
COL17A1Q9UMD9 RNU7-88P-201ENST00000458752 63 ntBASIC1.2□□□□□ -2.22
COL17A1Q9UMD9 AL353803.5-201ENST00000599815 141 ntBASIC1.2□□□□□ -2.22
COL17A1Q9UMD9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
COL17A1Q9UMD9 SNORD63.2-201ENST00000516303 64 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms