Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 MIR521-2-201ENST00000384818 87 ntBASIC-1.17□□□□□ -2.6
CTSFQ9UBX1 MIR527-201ENST00000385244 85 ntBASIC-1.17□□□□□ -2.6
CTSFQ9UBX1 RNU6-794P-201ENST00000517261 64 ntBASIC-1.17□□□□□ -2.6
CTSFQ9UBX1 MIR548AG1-201ENST00000579932 66 ntBASIC-1.17□□□□□ -2.6
CTSFQ9UBX1 AC091912.2-201ENST00000624798 167 ntBASIC-1.17□□□□□ -2.6
CTSFQ9UBX1 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.18□□□□□ -2.6
CTSFQ9UBX1 MIR6874-201ENST00000635894 71 ntBASIC-1.18□□□□□ -2.6
CTSFQ9UBX1 RNU6-226P-201ENST00000363778 107 ntBASIC-1.19□□□□□ -2.6
CTSFQ9UBX1 SNORD115-27-201ENST00000364430 82 ntBASIC-1.19□□□□□ -2.6
CTSFQ9UBX1 MIR1236-201ENST00000408340 102 ntBASIC-1.19□□□□□ -2.6
CTSFQ9UBX1 RNU6-554P-201ENST00000410466 106 ntBASIC-1.19□□□□□ -2.6
CTSFQ9UBX1 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.19□□□□□ -2.6
CTSFQ9UBX1 SNORD57-201ENST00000448188 72 ntBASIC-1.19□□□□□ -2.6
CTSFQ9UBX1 MIR3165-201ENST00000579874 75 ntBASIC-1.19□□□□□ -2.6
CTSFQ9UBX1 MIR3133-201ENST00000583157 78 ntBASIC-1.19□□□□□ -2.6
CTSFQ9UBX1 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.19□□□□□ -2.6
CTSFQ9UBX1 U7.3-201ENST00000616123 62 ntBASIC-1.19□□□□□ -2.6
CTSFQ9UBX1 MIR6502-201ENST00000617296 76 ntBASIC-1.19□□□□□ -2.6
CTSFQ9UBX1 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.2□□□□□ -2.6
CTSFQ9UBX1 RNU6-106P-201ENST00000384405 107 ntBASIC-1.2□□□□□ -2.6
CTSFQ9UBX1 SNORA19-201ENST00000384737 128 ntBASIC-1.2□□□□□ -2.6
CTSFQ9UBX1 AC138207.3-201ENST00000585289 166 ntBASIC-1.2□□□□□ -2.6
CTSFQ9UBX1 MIR6129-201ENST00000616087 109 ntBASIC-1.2□□□□□ -2.6
CTSFQ9UBX1 RNU6-774P-201ENST00000363238 107 ntBASIC-1.21□□□□□ -2.6
CTSFQ9UBX1 SNORD115-33-201ENST00000363723 82 ntBASIC-1.21□□□□□ -2.6
CTSFQ9UBX1 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.21□□□□□ -2.6
CTSFQ9UBX1 MIR519A2-201ENST00000384990 87 ntBASIC-1.21□□□□□ -2.6
CTSFQ9UBX1 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.21□□□□□ -2.6
CTSFQ9UBX1 RNU7-154P-201ENST00000516194 62 ntBASIC-1.21□□□□□ -2.6
CTSFQ9UBX1 MIR6739-201ENST00000622461 75 ntBASIC-1.21□□□□□ -2.6
CTSFQ9UBX1 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.22□□□□□ -2.6
CTSFQ9UBX1 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.22□□□□□ -2.6
CTSFQ9UBX1 MIR1302-5-201ENST00000408164 150 ntBASIC-1.22□□□□□ -2.6
CTSFQ9UBX1 MIR4520-1-201ENST00000582609 70 ntBASIC-1.22□□□□□ -2.6
CTSFQ9UBX1 SNORD19-201ENST00000391191 68 ntBASIC-1.23□□□□□ -2.61
CTSFQ9UBX1 HLA-S-202ENST00000425174 53 ntBASIC-1.23□□□□□ -2.61
CTSFQ9UBX1 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.23□□□□□ -2.61
CTSFQ9UBX1 AL450471.1-201ENST00000447509 127 ntBASIC-1.23□□□□□ -2.61
CTSFQ9UBX1 RNU6-518P-201ENST00000516056 96 ntBASIC-1.23□□□□□ -2.61
CTSFQ9UBX1 RNU6-752P-201ENST00000516376 102 ntBASIC-1.23□□□□□ -2.61
CTSFQ9UBX1 MIR5591-201ENST00000578248 65 ntBASIC-1.23□□□□□ -2.61
CTSFQ9UBX1 RNU6-340P-201ENST00000364005 107 ntBASIC-1.24□□□□□ -2.61
CTSFQ9UBX1 RNU6-704P-201ENST00000364162 103 ntBASIC-1.24□□□□□ -2.61
CTSFQ9UBX1 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.24□□□□□ -2.61
CTSFQ9UBX1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.24□□□□□ -2.61
CTSFQ9UBX1 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.25□□□□□ -2.61
CTSFQ9UBX1 RNU6-576P-201ENST00000390854 102 ntBASIC-1.25□□□□□ -2.61
CTSFQ9UBX1 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.25□□□□□ -2.61
CTSFQ9UBX1 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.26□□□□□ -2.61
CTSFQ9UBX1 RNU4-61P-201ENST00000411243 107 ntBASIC-1.26□□□□□ -2.61
CTSFQ9UBX1 RNA5SP461-201ENST00000516451 104 ntBASIC-1.26□□□□□ -2.61
CTSFQ9UBX1 RNU6-164P-201ENST00000364604 103 ntBASIC-1.27□□□□□ -2.61
CTSFQ9UBX1 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.27□□□□□ -2.61
CTSFQ9UBX1 RNU6-209P-201ENST00000384118 107 ntBASIC-1.27□□□□□ -2.61
CTSFQ9UBX1 RNU6-959P-201ENST00000384671 107 ntBASIC-1.27□□□□□ -2.61
CTSFQ9UBX1 RNU6-246P-201ENST00000384702 107 ntBASIC-1.27□□□□□ -2.61
CTSFQ9UBX1 AL021921.1-201ENST00000442774 93 ntBASIC-1.27□□□□□ -2.61
CTSFQ9UBX1 AL365222.1-201ENST00000614661 98 ntBASIC-1.27□□□□□ -2.61
CTSFQ9UBX1 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.27□□□□□ -2.61
CTSFQ9UBX1 MIR4320-201ENST00000636981 65 ntBASIC-1.27□□□□□ -2.61
CTSFQ9UBX1 RNU6-681P-201ENST00000364012 104 ntBASIC-1.28□□□□□ -2.61
CTSFQ9UBX1 MIR507-201ENST00000385234 94 ntBASIC-1.28□□□□□ -2.61
CTSFQ9UBX1 RPL35AP4-201ENST00000412007 102 ntBASIC-1.28□□□□□ -2.61
CTSFQ9UBX1 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.29□□□□□ -2.62
CTSFQ9UBX1 RNA5SP86-201ENST00000390869 98 ntBASIC-1.29□□□□□ -2.62
CTSFQ9UBX1 RNA5SP266-201ENST00000410273 108 ntBASIC-1.29□□□□□ -2.62
CTSFQ9UBX1 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.29□□□□□ -2.62
CTSFQ9UBX1 AL035461.1-201ENST00000421490 332 ntBASIC-1.29□□□□□ -2.62
CTSFQ9UBX1 AC090616.4-201ENST00000448026 115 ntBASIC-1.29□□□□□ -2.62
CTSFQ9UBX1 RNU6-732P-201ENST00000516033 103 ntBASIC-1.29□□□□□ -2.62
CTSFQ9UBX1 RNU6-656P-201ENST00000516785 107 ntBASIC-1.29□□□□□ -2.62
CTSFQ9UBX1 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.29□□□□□ -2.62
CTSFQ9UBX1 AL627230.5-201ENST00000619807 58 ntBASIC-1.29□□□□□ -2.62
CTSFQ9UBX1 RNA5SP331-201ENST00000364986 107 ntBASIC-1.3□□□□□ -2.62
CTSFQ9UBX1 AL353691.2-201ENST00000443795 59 ntBASIC-1.3□□□□□ -2.62
CTSFQ9UBX1 MIR4770-201ENST00000579149 58 ntBASIC-1.3□□□□□ -2.62
CTSFQ9UBX1 MIR519C-201ENST00000385053 87 ntBASIC-1.31□□□□□ -2.62
CTSFQ9UBX1 SNORD77.2-201ENST00000391045 68 ntBASIC-1.31□□□□□ -2.62
CTSFQ9UBX1 RNU7-88P-201ENST00000458752 63 ntBASIC-1.31□□□□□ -2.62
CTSFQ9UBX1 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.31□□□□□ -2.62
CTSFQ9UBX1 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.31□□□□□ -2.62
CTSFQ9UBX1 RNU6-589P-201ENST00000516485 107 ntBASIC-1.32□□□□□ -2.62
CTSFQ9UBX1 U7.5-201ENST00000517224 61 ntBASIC-1.32□□□□□ -2.62
CTSFQ9UBX1 RNU6-766P-201ENST00000362478 107 ntBASIC-1.33□□□□□ -2.62
CTSFQ9UBX1 MIR487B-201ENST00000385021 84 ntBASIC-1.33□□□□□ -2.62
CTSFQ9UBX1 MTATP8P2-201ENST00000435212 202 ntBASIC-1.33□□□□□ -2.62
CTSFQ9UBX1 AC008267.6-201ENST00000441664 139 ntBASIC-1.33□□□□□ -2.62
CTSFQ9UBX1 MIR5683-201ENST00000636514 76 ntBASIC-1.33□□□□□ -2.62
CTSFQ9UBX1 AL078595.1-201ENST00000404458 226 ntBASIC-1.34□□□□□ -2.62
CTSFQ9UBX1 RNU6-168P-201ENST00000516189 101 ntBASIC-1.34□□□□□ -2.62
CTSFQ9UBX1 U2.7-201ENST00000619197 100 ntBASIC-1.34□□□□□ -2.62
CTSFQ9UBX1 RNU6-633P-201ENST00000362612 103 ntBASIC-1.35□□□□□ -2.63
CTSFQ9UBX1 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.35□□□□□ -2.63
CTSFQ9UBX1 RNU6-540P-201ENST00000384622 101 ntBASIC-1.35□□□□□ -2.63
CTSFQ9UBX1 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.36□□□□□ -2.63
CTSFQ9UBX1 RNU6-81P-201ENST00000365608 104 ntBASIC-1.36□□□□□ -2.63
CTSFQ9UBX1 MIR4668-201ENST00000582284 70 ntBASIC-1.36□□□□□ -2.63
CTSFQ9UBX1 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.37□□□□□ -2.63
CTSFQ9UBX1 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.37□□□□□ -2.63
CTSFQ9UBX1 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.37□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms