Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 MIR520E-201ENST00000384867 87 ntBASIC1.42□□□□□ -2.18
NXF1Q9UBU9 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.42□□□□□ -2.18
NXF1Q9UBU9 MIR18A-201ENST00000362310 71 ntBASIC1.41□□□□□ -2.18
NXF1Q9UBU9 RNU6-502P-201ENST00000362419 108 ntBASIC1.41□□□□□ -2.18
NXF1Q9UBU9 SNORD45.2-201ENST00000363552 72 ntBASIC1.41□□□□□ -2.18
NXF1Q9UBU9 SNORA25-201ENST00000384384 134 ntBASIC1.41□□□□□ -2.18
NXF1Q9UBU9 RNU1-29P-201ENST00000606574 126 ntBASIC1.41□□□□□ -2.18
NXF1Q9UBU9 MIR6788-201ENST00000618842 66 ntBASIC1.41□□□□□ -2.18
NXF1Q9UBU9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
NXF1Q9UBU9 RNU1-93P-201ENST00000364704 169 ntBASIC1.4□□□□□ -2.19
NXF1Q9UBU9 AL353803.5-201ENST00000599815 141 ntBASIC1.4□□□□□ -2.19
NXF1Q9UBU9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
NXF1Q9UBU9 SNORD114-29-201ENST00000364819 70 ntBASIC1.39□□□□□ -2.19
NXF1Q9UBU9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.39□□□□□ -2.19
NXF1Q9UBU9 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
NXF1Q9UBU9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.38□□□□□ -2.19
NXF1Q9UBU9 RNA5SP327-201ENST00000362494 101 ntBASIC1.38□□□□□ -2.19
NXF1Q9UBU9 MIR548J-201ENST00000408833 112 ntBASIC1.38□□□□□ -2.19
NXF1Q9UBU9 RPS29P23-201ENST00000458635 123 ntBASIC1.38□□□□□ -2.19
NXF1Q9UBU9 RNU6-175P-201ENST00000516896 107 ntBASIC1.38□□□□□ -2.19
NXF1Q9UBU9 RNU7-188P-201ENST00000517063 64 ntBASIC1.38□□□□□ -2.19
NXF1Q9UBU9 SNORD124-201ENST00000459577 104 ntBASIC1.37□□□□□ -2.19
NXF1Q9UBU9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
NXF1Q9UBU9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
NXF1Q9UBU9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.36□□□□□ -2.19
NXF1Q9UBU9 Y_RNA.698-201ENST00000516798 118 ntBASIC1.36□□□□□ -2.19
NXF1Q9UBU9 RN7SL793P-201ENST00000583259 296 ntBASIC1.36□□□□□ -2.19
NXF1Q9UBU9 MIR3660-201ENST00000584845 100 ntBASIC1.36□□□□□ -2.19
NXF1Q9UBU9 AC108676.2-201ENST00000605225 163 ntBASIC1.36□□□□□ -2.19
NXF1Q9UBU9 MTRNR2L9-201ENST00000622562 75 ntBASIC1.36□□□□□ -2.19
NXF1Q9UBU9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
NXF1Q9UBU9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
NXF1Q9UBU9 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
NXF1Q9UBU9 SNORD57-201ENST00000448188 72 ntBASIC1.35□□□□□ -2.19
NXF1Q9UBU9 U7.5-201ENST00000517224 61 ntBASIC1.35□□□□□ -2.19
NXF1Q9UBU9 AC011195.1-201ENST00000578177 177 ntBASIC1.35□□□□□ -2.19
NXF1Q9UBU9 MIR5706-201ENST00000579841 80 ntBASIC1.35□□□□□ -2.19
NXF1Q9UBU9 MIR4432-201ENST00000581823 84 ntBASIC1.35□□□□□ -2.19
NXF1Q9UBU9 RNU6-530P-201ENST00000391180 107 ntBASIC1.34□□□□□ -2.19
NXF1Q9UBU9 SNORD114-27-201ENST00000363766 70 ntBASIC1.33□□□□□ -2.2
NXF1Q9UBU9 Y_RNA.206-201ENST00000364136 102 ntBASIC1.33□□□□□ -2.2
NXF1Q9UBU9 RNU6-1036P-201ENST00000383959 104 ntBASIC1.33□□□□□ -2.2
NXF1Q9UBU9 MIR19B1-201ENST00000384829 87 ntBASIC1.33□□□□□ -2.2
NXF1Q9UBU9 RNU7-88P-201ENST00000458752 63 ntBASIC1.33□□□□□ -2.2
NXF1Q9UBU9 Y_RNA.68-201ENST00000362881 102 ntBASIC1.32□□□□□ -2.2
NXF1Q9UBU9 MIR216A-201ENST00000385063 110 ntBASIC1.32□□□□□ -2.2
NXF1Q9UBU9 SNORD63.2-201ENST00000516303 64 ntBASIC1.32□□□□□ -2.2
NXF1Q9UBU9 RNU6-1326P-201ENST00000391262 107 ntBASIC1.31□□□□□ -2.2
NXF1Q9UBU9 SNORD99-201ENST00000408612 74 ntBASIC1.31□□□□□ -2.2
NXF1Q9UBU9 AC069271.1-201ENST00000445577 156 ntBASIC1.31□□□□□ -2.2
NXF1Q9UBU9 RNU6-1174P-201ENST00000517278 101 ntBASIC1.31□□□□□ -2.2
NXF1Q9UBU9 SNORD115-23-201ENST00000364461 82 ntBASIC1.3□□□□□ -2.2
NXF1Q9UBU9 Y_RNA.345-201ENST00000365384 92 ntBASIC1.3□□□□□ -2.2
NXF1Q9UBU9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
NXF1Q9UBU9 MIR200A-201ENST00000384875 90 ntBASIC1.3□□□□□ -2.2
NXF1Q9UBU9 MIR150-201ENST00000385048 84 ntBASIC1.29□□□□□ -2.2
NXF1Q9UBU9 SNORD63.1-201ENST00000516178 80 ntBASIC1.29□□□□□ -2.2
NXF1Q9UBU9 RNU4-45P-201ENST00000365469 141 ntBASIC1.28□□□□□ -2.2
NXF1Q9UBU9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.28□□□□□ -2.2
NXF1Q9UBU9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.28□□□□□ -2.2
NXF1Q9UBU9 RNA5SP436-201ENST00000516020 115 ntBASIC1.28□□□□□ -2.2
NXF1Q9UBU9 MIR3170-201ENST00000582699 77 ntBASIC1.28□□□□□ -2.2
NXF1Q9UBU9 RNU6-1232P-201ENST00000516299 86 ntBASIC1.27□□□□□ -2.21
NXF1Q9UBU9 RNA5SP255-201ENST00000516370 107 ntBASIC1.27□□□□□ -2.21
NXF1Q9UBU9 SNORD26-201ENST00000384147 75 ntBASIC1.26□□□□□ -2.21
NXF1Q9UBU9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.26□□□□□ -2.21
NXF1Q9UBU9 Y_RNA.433-201ENST00000384089 102 ntBASIC1.25□□□□□ -2.21
NXF1Q9UBU9 MIR6888-201ENST00000621977 67 ntBASIC1.25□□□□□ -2.21
NXF1Q9UBU9 SNORD111B-201ENST00000408587 80 ntBASIC1.24□□□□□ -2.21
NXF1Q9UBU9 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.24□□□□□ -2.21
NXF1Q9UBU9 MIR4464-201ENST00000580818 92 ntBASIC1.24□□□□□ -2.21
NXF1Q9UBU9 MIR4677-201ENST00000584153 80 ntBASIC1.24□□□□□ -2.21
NXF1Q9UBU9 RN7SL660P-201ENST00000614852 299 ntBASIC1.24□□□□□ -2.21
NXF1Q9UBU9 MIR4317-201ENST00000637586 65 ntBASIC1.24□□□□□ -2.21
NXF1Q9UBU9 MIR26B-201ENST00000362251 77 ntBASIC1.23□□□□□ -2.21
NXF1Q9UBU9 SNORA2A-201ENST00000383885 135 ntBASIC1.23□□□□□ -2.21
NXF1Q9UBU9 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
NXF1Q9UBU9 RNA5SP222-201ENST00000411039 105 ntBASIC1.23□□□□□ -2.21
NXF1Q9UBU9 RNU6-229P-201ENST00000516614 102 ntBASIC1.23□□□□□ -2.21
NXF1Q9UBU9 RNA5SP457-201ENST00000363657 124 ntBASIC1.22□□□□□ -2.21
NXF1Q9UBU9 RNA5SP517-201ENST00000364724 117 ntBASIC1.22□□□□□ -2.21
NXF1Q9UBU9 MIR193B-201ENST00000384907 83 ntBASIC1.22□□□□□ -2.21
NXF1Q9UBU9 U7.6-201ENST00000610841 64 ntBASIC1.22□□□□□ -2.21
NXF1Q9UBU9 MIR6507-201ENST00000613630 70 ntBASIC1.22□□□□□ -2.21
NXF1Q9UBU9 Y_RNA.321-201ENST00000365149 102 ntBASIC1.21□□□□□ -2.22
NXF1Q9UBU9 RNU6-133P-201ENST00000383989 107 ntBASIC1.21□□□□□ -2.22
NXF1Q9UBU9 AP000676.1-201ENST00000533307 52 ntBASIC1.21□□□□□ -2.22
NXF1Q9UBU9 MIR5000-201ENST00000577717 103 ntBASIC1.21□□□□□ -2.22
NXF1Q9UBU9 AC084368.1-201ENST00000620935 65 ntBASIC1.21□□□□□ -2.22
NXF1Q9UBU9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.21□□□□□ -2.22
NXF1Q9UBU9 SNORD114-24-201ENST00000365029 72 ntBASIC1.2□□□□□ -2.22
NXF1Q9UBU9 MIR501-201ENST00000390204 84 ntBASIC1.2□□□□□ -2.22
NXF1Q9UBU9 MIR1273G-201ENST00000577677 100 ntBASIC1.2□□□□□ -2.22
NXF1Q9UBU9 SNORA25.18-201ENST00000607153 114 ntBASIC1.2□□□□□ -2.22
NXF1Q9UBU9 AL445584.3-201ENST00000617173 78 ntBASIC1.2□□□□□ -2.22
NXF1Q9UBU9 snoR1.1-201ENST00000628177 80 ntBASIC1.2□□□□□ -2.22
NXF1Q9UBU9 RNU6-1047P-201ENST00000364418 107 ntBASIC1.19□□□□□ -2.22
NXF1Q9UBU9 Y_RNA.423-201ENST00000384057 113 ntBASIC1.19□□□□□ -2.22
NXF1Q9UBU9 RNU6-258P-201ENST00000390884 101 ntBASIC1.19□□□□□ -2.22
NXF1Q9UBU9 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 227 ms