Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.14□□□□□ -2.23
CUEDC1Q9NWM3 RNU6-848P-201ENST00000515948 107 ntBASIC1.14□□□□□ -2.23
CUEDC1Q9NWM3 RNU6-617P-201ENST00000516147 107 ntBASIC1.14□□□□□ -2.23
CUEDC1Q9NWM3 RNU6-473P-201ENST00000516164 107 ntBASIC1.14□□□□□ -2.23
CUEDC1Q9NWM3 RNU6-1049P-201ENST00000516414 107 ntBASIC1.14□□□□□ -2.23
CUEDC1Q9NWM3 RNU7-160P-201ENST00000516660 62 ntBASIC1.14□□□□□ -2.23
CUEDC1Q9NWM3 RNU6-419P-201ENST00000517030 63 ntBASIC1.14□□□□□ -2.23
CUEDC1Q9NWM3 RN7SL793P-201ENST00000583259 296 ntBASIC1.14□□□□□ -2.23
CUEDC1Q9NWM3 SNORA2A-201ENST00000383885 135 ntBASIC1.13□□□□□ -2.23
CUEDC1Q9NWM3 MIRLET7B-201ENST00000385140 83 ntBASIC1.13□□□□□ -2.23
CUEDC1Q9NWM3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.13□□□□□ -2.23
CUEDC1Q9NWM3 SNORD114-27-201ENST00000363766 70 ntBASIC1.12□□□□□ -2.23
CUEDC1Q9NWM3 RNA5SP517-201ENST00000364724 117 ntBASIC1.12□□□□□ -2.23
CUEDC1Q9NWM3 RNY1P8-201ENST00000383970 114 ntBASIC1.12□□□□□ -2.23
CUEDC1Q9NWM3 RNU6-458P-201ENST00000384179 107 ntBASIC1.12□□□□□ -2.23
CUEDC1Q9NWM3 AC069271.1-201ENST00000445577 156 ntBASIC1.12□□□□□ -2.23
CUEDC1Q9NWM3 AC087343.1-201ENST00000477341 475 ntBASIC1.12□□□□□ -2.23
CUEDC1Q9NWM3 PSMC1P5-201ENST00000512850 177 ntBASIC1.12□□□□□ -2.23
CUEDC1Q9NWM3 MIR548AG1-201ENST00000579932 66 ntBASIC1.12□□□□□ -2.23
CUEDC1Q9NWM3 MIR4490-201ENST00000582647 84 ntBASIC1.12□□□□□ -2.23
CUEDC1Q9NWM3 U6.58-201ENST00000613107 107 ntBASIC1.12□□□□□ -2.23
CUEDC1Q9NWM3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CUEDC1Q9NWM3 RNU7-188P-201ENST00000517063 64 ntBASIC1.11□□□□□ -2.23
CUEDC1Q9NWM3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.11□□□□□ -2.23
CUEDC1Q9NWM3 RNU6-247P-201ENST00000362636 107 ntBASIC1.1□□□□□ -2.23
CUEDC1Q9NWM3 SNORD118-201ENST00000363593 134 ntBASIC1.1□□□□□ -2.23
CUEDC1Q9NWM3 MIR140-201ENST00000385282 100 ntBASIC1.1□□□□□ -2.23
CUEDC1Q9NWM3 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
CUEDC1Q9NWM3 MIR6767-201ENST00000637302 66 ntBASIC1.1□□□□□ -2.23
CUEDC1Q9NWM3 RNU6-502P-201ENST00000362419 108 ntBASIC1.09□□□□□ -2.23
CUEDC1Q9NWM3 RNU6-229P-201ENST00000516614 102 ntBASIC1.09□□□□□ -2.23
CUEDC1Q9NWM3 RNU6-175P-201ENST00000516896 107 ntBASIC1.09□□□□□ -2.23
CUEDC1Q9NWM3 MIR5000-201ENST00000577717 103 ntBASIC1.09□□□□□ -2.23
CUEDC1Q9NWM3 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
CUEDC1Q9NWM3 SNORA36.2-201ENST00000384004 127 ntBASIC1.07□□□□□ -2.24
CUEDC1Q9NWM3 MIR216A-201ENST00000385063 110 ntBASIC1.07□□□□□ -2.24
CUEDC1Q9NWM3 SNORA40.8-201ENST00000411034 126 ntBASIC1.07□□□□□ -2.24
CUEDC1Q9NWM3 RNU6-110P-201ENST00000384508 104 ntBASIC1.06□□□□□ -2.24
CUEDC1Q9NWM3 RNU6-782P-201ENST00000516852 104 ntBASIC1.06□□□□□ -2.24
CUEDC1Q9NWM3 MIR4677-201ENST00000584153 80 ntBASIC1.06□□□□□ -2.24
CUEDC1Q9NWM3 RNU6-1206P-201ENST00000516339 103 ntBASIC1.05□□□□□ -2.24
CUEDC1Q9NWM3 SNORA25.18-201ENST00000607153 114 ntBASIC1.05□□□□□ -2.24
CUEDC1Q9NWM3 MIR545-201ENST00000385085 106 ntBASIC1.04□□□□□ -2.24
CUEDC1Q9NWM3 SNORD71-201ENST00000411292 86 ntBASIC1.04□□□□□ -2.24
CUEDC1Q9NWM3 RNU6-1036P-201ENST00000383959 104 ntBASIC1.03□□□□□ -2.24
CUEDC1Q9NWM3 AC084368.1-201ENST00000620935 65 ntBASIC1.03□□□□□ -2.24
CUEDC1Q9NWM3 AL353803.5-201ENST00000599815 141 ntBASIC1.02□□□□□ -2.25
CUEDC1Q9NWM3 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
CUEDC1Q9NWM3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CUEDC1Q9NWM3 RNA5SP457-201ENST00000363657 124 ntBASIC1.01□□□□□ -2.25
CUEDC1Q9NWM3 Y_RNA.178-201ENST00000363832 102 ntBASIC1.01□□□□□ -2.25
CUEDC1Q9NWM3 RNU6-598P-201ENST00000364017 105 ntBASIC1.01□□□□□ -2.25
CUEDC1Q9NWM3 Y_RNA.423-201ENST00000384057 113 ntBASIC1.01□□□□□ -2.25
CUEDC1Q9NWM3 MIR501-201ENST00000390204 84 ntBASIC1.01□□□□□ -2.25
CUEDC1Q9NWM3 AL590095.2-201ENST00000604136 117 ntBASIC1.01□□□□□ -2.25
CUEDC1Q9NWM3 MIR6857-201ENST00000613267 93 ntBASIC1.01□□□□□ -2.25
CUEDC1Q9NWM3 Y_RNA.69-201ENST00000362885 109 ntBASIC1□□□□□ -2.25
CUEDC1Q9NWM3 SNORD115-23-201ENST00000364461 82 ntBASIC1□□□□□ -2.25
CUEDC1Q9NWM3 RNA5SP436-201ENST00000516020 115 ntBASIC1□□□□□ -2.25
CUEDC1Q9NWM3 RNU7-151P-201ENST00000516930 53 ntBASIC1□□□□□ -2.25
CUEDC1Q9NWM3 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
CUEDC1Q9NWM3 MIR518A1-201ENST00000385068 85 ntBASIC0.99□□□□□ -2.25
CUEDC1Q9NWM3 Y_RNA.30-201ENST00000362572 97 ntBASIC0.98□□□□□ -2.25
CUEDC1Q9NWM3 RNU6-924P-201ENST00000362926 108 ntBASIC0.98□□□□□ -2.25
CUEDC1Q9NWM3 MIR193B-201ENST00000384907 83 ntBASIC0.98□□□□□ -2.25
CUEDC1Q9NWM3 MIR548AA1-201ENST00000384971 97 ntBASIC0.98□□□□□ -2.25
CUEDC1Q9NWM3 RNU6-995P-201ENST00000391244 107 ntBASIC0.98□□□□□ -2.25
CUEDC1Q9NWM3 MIR876-201ENST00000401147 81 ntBASIC0.98□□□□□ -2.25
CUEDC1Q9NWM3 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
CUEDC1Q9NWM3 RNU6-1232P-201ENST00000516299 86 ntBASIC0.98□□□□□ -2.25
CUEDC1Q9NWM3 CYP3A137P-201ENST00000562436 69 ntBASIC0.98□□□□□ -2.25
CUEDC1Q9NWM3 RNU4-38P-201ENST00000364472 129 ntBASIC0.97□□□□□ -2.25
CUEDC1Q9NWM3 RNU6-828P-201ENST00000364876 107 ntBASIC0.97□□□□□ -2.25
CUEDC1Q9NWM3 MIR106A-201ENST00000384870 81 ntBASIC0.97□□□□□ -2.25
CUEDC1Q9NWM3 MIR329-2-201ENST00000385029 84 ntBASIC0.97□□□□□ -2.25
CUEDC1Q9NWM3 MIR579-201ENST00000385221 98 ntBASIC0.97□□□□□ -2.25
CUEDC1Q9NWM3 RNU6-863P-201ENST00000515989 104 ntBASIC0.97□□□□□ -2.25
CUEDC1Q9NWM3 MIR1273G-201ENST00000577677 100 ntBASIC0.97□□□□□ -2.25
CUEDC1Q9NWM3 MIR4653-201ENST00000585107 83 ntBASIC0.97□□□□□ -2.25
CUEDC1Q9NWM3 MIR6755-201ENST00000619993 66 ntBASIC0.97□□□□□ -2.25
CUEDC1Q9NWM3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.97□□□□□ -2.25
CUEDC1Q9NWM3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
CUEDC1Q9NWM3 RNU6-696P-201ENST00000390834 107 ntBASIC0.96□□□□□ -2.26
CUEDC1Q9NWM3 AC108676.2-201ENST00000605225 163 ntBASIC0.96□□□□□ -2.26
CUEDC1Q9NWM3 U2.18-201ENST00000622185 84 ntBASIC0.96□□□□□ -2.26
CUEDC1Q9NWM3 MIR373-201ENST00000362273 69 ntBASIC0.95□□□□□ -2.26
CUEDC1Q9NWM3 MIR125B1-201ENST00000385236 88 ntBASIC0.95□□□□□ -2.26
CUEDC1Q9NWM3 MIR760-201ENST00000390220 80 ntBASIC0.95□□□□□ -2.26
CUEDC1Q9NWM3 AC098934.3-201ENST00000430450 190 ntBASIC0.95□□□□□ -2.26
CUEDC1Q9NWM3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.95□□□□□ -2.26
CUEDC1Q9NWM3 RN7SL660P-201ENST00000614852 299 ntBASIC0.95□□□□□ -2.26
CUEDC1Q9NWM3 RNA5SP128-201ENST00000365305 116 ntBASIC0.94□□□□□ -2.26
CUEDC1Q9NWM3 MIR532-201ENST00000385025 91 ntBASIC0.94□□□□□ -2.26
CUEDC1Q9NWM3 AL451105.1-201ENST00000450005 189 ntBASIC0.94□□□□□ -2.26
CUEDC1Q9NWM3 RNU6-1262P-201ENST00000516217 96 ntBASIC0.94□□□□□ -2.26
CUEDC1Q9NWM3 MIR548AL-201ENST00000578416 97 ntBASIC0.94□□□□□ -2.26
CUEDC1Q9NWM3 Y_RNA.68-201ENST00000362881 102 ntBASIC0.93□□□□□ -2.26
CUEDC1Q9NWM3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
CUEDC1Q9NWM3 MIR3925-201ENST00000584674 77 ntBASIC0.92□□□□□ -2.26
CUEDC1Q9NWM3 snoR1.1-201ENST00000628177 80 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms