Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 MIR548X2-201ENST00000579776 100 ntBASIC-1.4□□□□□ -2.63
TREX1Q9NSU2 MIR3123-201ENST00000583417 75 ntBASIC-1.4□□□□□ -2.63
TREX1Q9NSU2 RNU6-682P-201ENST00000363843 106 ntBASIC-1.41□□□□□ -2.64
TREX1Q9NSU2 RNU6-813P-201ENST00000384691 107 ntBASIC-1.41□□□□□ -2.64
TREX1Q9NSU2 MIR520D-201ENST00000385002 87 ntBASIC-1.41□□□□□ -2.64
TREX1Q9NSU2 RNU6-696P-201ENST00000390834 107 ntBASIC-1.41□□□□□ -2.64
TREX1Q9NSU2 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.41□□□□□ -2.64
TREX1Q9NSU2 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.41□□□□□ -2.64
TREX1Q9NSU2 RNU7-120P-201ENST00000459334 63 ntBASIC-1.41□□□□□ -2.64
TREX1Q9NSU2 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.41□□□□□ -2.64
TREX1Q9NSU2 RNU6-752P-201ENST00000516376 102 ntBASIC-1.41□□□□□ -2.64
TREX1Q9NSU2 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.41□□□□□ -2.64
TREX1Q9NSU2 MIR548AM-201ENST00000584298 74 ntBASIC-1.41□□□□□ -2.64
TREX1Q9NSU2 RNY3P2-201ENST00000362918 102 ntBASIC-1.42□□□□□ -2.64
TREX1Q9NSU2 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.42□□□□□ -2.64
TREX1Q9NSU2 RNU6-458P-201ENST00000384179 107 ntBASIC-1.42□□□□□ -2.64
TREX1Q9NSU2 U6.58-201ENST00000613107 107 ntBASIC-1.42□□□□□ -2.64
TREX1Q9NSU2 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.42□□□□□ -2.64
TREX1Q9NSU2 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.43□□□□□ -2.64
TREX1Q9NSU2 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.43□□□□□ -2.64
TREX1Q9NSU2 SNORD58C-201ENST00000365223 64 ntBASIC-1.43□□□□□ -2.64
TREX1Q9NSU2 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.43□□□□□ -2.64
TREX1Q9NSU2 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.43□□□□□ -2.64
TREX1Q9NSU2 RNU6-327P-201ENST00000516270 127 ntBASIC-1.43□□□□□ -2.64
TREX1Q9NSU2 AC120024.2-201ENST00000576526 175 ntBASIC-1.43□□□□□ -2.64
TREX1Q9NSU2 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.44□□□□□ -2.64
TREX1Q9NSU2 SNORD45B-201ENST00000364617 72 ntBASIC-1.44□□□□□ -2.64
TREX1Q9NSU2 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.44□□□□□ -2.64
TREX1Q9NSU2 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.44□□□□□ -2.64
TREX1Q9NSU2 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.44□□□□□ -2.64
TREX1Q9NSU2 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.44□□□□□ -2.64
TREX1Q9NSU2 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.45□□□□□ -2.64
TREX1Q9NSU2 RNU6-563P-201ENST00000364872 108 ntBASIC-1.45□□□□□ -2.64
TREX1Q9NSU2 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.45□□□□□ -2.64
TREX1Q9NSU2 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.45□□□□□ -2.64
TREX1Q9NSU2 RNU6-980P-201ENST00000516925 103 ntBASIC-1.45□□□□□ -2.64
TREX1Q9NSU2 MIR4503-201ENST00000582187 83 ntBASIC-1.45□□□□□ -2.64
TREX1Q9NSU2 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
TREX1Q9NSU2 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.46□□□□□ -2.64
TREX1Q9NSU2 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.46□□□□□ -2.64
TREX1Q9NSU2 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.46□□□□□ -2.64
TREX1Q9NSU2 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.46□□□□□ -2.64
TREX1Q9NSU2 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.46□□□□□ -2.64
TREX1Q9NSU2 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.47□□□□□ -2.64
TREX1Q9NSU2 RNU6-196P-201ENST00000384315 107 ntBASIC-1.47□□□□□ -2.64
TREX1Q9NSU2 MIR548A3-201ENST00000385297 97 ntBASIC-1.47□□□□□ -2.64
TREX1Q9NSU2 MIR3144-201ENST00000579460 79 ntBASIC-1.47□□□□□ -2.64
TREX1Q9NSU2 MIR4796-201ENST00000580742 81 ntBASIC-1.47□□□□□ -2.64
TREX1Q9NSU2 MIR4777-201ENST00000583710 86 ntBASIC-1.47□□□□□ -2.64
TREX1Q9NSU2 RNU6-598P-201ENST00000364017 105 ntBASIC-1.48□□□□□ -2.65
TREX1Q9NSU2 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.48□□□□□ -2.65
TREX1Q9NSU2 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.48□□□□□ -2.65
TREX1Q9NSU2 RNU4-88P-201ENST00000411220 86 ntBASIC-1.48□□□□□ -2.65
TREX1Q9NSU2 RNU7-174P-201ENST00000516248 59 ntBASIC-1.48□□□□□ -2.65
TREX1Q9NSU2 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.49□□□□□ -2.65
TREX1Q9NSU2 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.49□□□□□ -2.65
TREX1Q9NSU2 RNA5SP405-201ENST00000363059 114 ntBASIC-1.49□□□□□ -2.65
TREX1Q9NSU2 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.49□□□□□ -2.65
TREX1Q9NSU2 RNU6-340P-201ENST00000364005 107 ntBASIC-1.49□□□□□ -2.65
TREX1Q9NSU2 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.49□□□□□ -2.65
TREX1Q9NSU2 RNU6-258P-201ENST00000390884 101 ntBASIC-1.49□□□□□ -2.65
TREX1Q9NSU2 AL035461.1-201ENST00000421490 332 ntBASIC-1.49□□□□□ -2.65
TREX1Q9NSU2 MIR4679-2-201ENST00000578358 77 ntBASIC-1.49□□□□□ -2.65
TREX1Q9NSU2 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.49□□□□□ -2.65
TREX1Q9NSU2 AL035470.1-201ENST00000622571 220 ntBASIC-1.49□□□□□ -2.65
TREX1Q9NSU2 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.5□□□□□ -2.65
TREX1Q9NSU2 RNU6-645P-201ENST00000364649 106 ntBASIC-1.5□□□□□ -2.65
TREX1Q9NSU2 RNU6-574P-201ENST00000384265 107 ntBASIC-1.5□□□□□ -2.65
TREX1Q9NSU2 RNU6-587P-201ENST00000391282 106 ntBASIC-1.5□□□□□ -2.65
TREX1Q9NSU2 MIR429-201ENST00000362106 83 ntBASIC-1.51□□□□□ -2.65
TREX1Q9NSU2 RNY4P27-201ENST00000363341 96 ntBASIC-1.51□□□□□ -2.65
TREX1Q9NSU2 RNU6-200P-201ENST00000364743 107 ntBASIC-1.51□□□□□ -2.65
TREX1Q9NSU2 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.51□□□□□ -2.65
TREX1Q9NSU2 SNORD58A-201ENST00000383875 65 ntBASIC-1.51□□□□□ -2.65
TREX1Q9NSU2 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.51□□□□□ -2.65
TREX1Q9NSU2 RNU6-804P-201ENST00000384286 107 ntBASIC-1.51□□□□□ -2.65
TREX1Q9NSU2 MIR569-201ENST00000385228 96 ntBASIC-1.51□□□□□ -2.65
TREX1Q9NSU2 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.51□□□□□ -2.65
TREX1Q9NSU2 RNU6-394P-201ENST00000410735 107 ntBASIC-1.51□□□□□ -2.65
TREX1Q9NSU2 AL450471.1-201ENST00000447509 127 ntBASIC-1.51□□□□□ -2.65
TREX1Q9NSU2 MIR3170-201ENST00000582699 77 ntBASIC-1.51□□□□□ -2.65
TREX1Q9NSU2 RNU6-681P-201ENST00000364012 104 ntBASIC-1.52□□□□□ -2.65
TREX1Q9NSU2 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.52□□□□□ -2.65
TREX1Q9NSU2 U2.18-201ENST00000622185 84 ntBASIC-1.52□□□□□ -2.65
TREX1Q9NSU2 RNU6-194P-201ENST00000363862 105 ntBASIC-1.53□□□□□ -2.65
TREX1Q9NSU2 RNU6-880P-201ENST00000384526 107 ntBASIC-1.53□□□□□ -2.65
TREX1Q9NSU2 MIR548C-201ENST00000384815 97 ntBASIC-1.53□□□□□ -2.65
TREX1Q9NSU2 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.53□□□□□ -2.65
TREX1Q9NSU2 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.53□□□□□ -2.65
TREX1Q9NSU2 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.53□□□□□ -2.65
TREX1Q9NSU2 RNU6-795P-201ENST00000516323 103 ntBASIC-1.53□□□□□ -2.65
TREX1Q9NSU2 AC012531.4-201ENST00000616509 177 ntBASIC-1.53□□□□□ -2.65
TREX1Q9NSU2 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.53□□□□□ -2.65
TREX1Q9NSU2 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.54□□□□□ -2.66
TREX1Q9NSU2 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.54□□□□□ -2.66
TREX1Q9NSU2 MIR1236-201ENST00000408340 102 ntBASIC-1.54□□□□□ -2.66
TREX1Q9NSU2 MIR5009-201ENST00000578736 100 ntBASIC-1.54□□□□□ -2.66
TREX1Q9NSU2 AC004792.1-201ENST00000614523 137 ntBASIC-1.54□□□□□ -2.66
TREX1Q9NSU2 AL157777.2-201ENST00000258070 137 ntBASIC-1.55□□□□□ -2.66
TREX1Q9NSU2 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.55□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms