Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 MIR519C-201ENST00000385053 87 ntBASIC-1.28□□□□□ -2.61
EXOSC4Q9NPD3 AL035461.1-201ENST00000421490 332 ntBASIC-1.28□□□□□ -2.61
EXOSC4Q9NPD3 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.28□□□□□ -2.61
EXOSC4Q9NPD3 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.28□□□□□ -2.61
EXOSC4Q9NPD3 MIR548AG1-201ENST00000579932 66 ntBASIC-1.28□□□□□ -2.61
EXOSC4Q9NPD3 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.28□□□□□ -2.61
EXOSC4Q9NPD3 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.29□□□□□ -2.62
EXOSC4Q9NPD3 RNU6-681P-201ENST00000364012 104 ntBASIC-1.29□□□□□ -2.62
EXOSC4Q9NPD3 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.29□□□□□ -2.62
EXOSC4Q9NPD3 RNU6-24P-201ENST00000384440 107 ntBASIC-1.29□□□□□ -2.62
EXOSC4Q9NPD3 RNU6-959P-201ENST00000384671 107 ntBASIC-1.29□□□□□ -2.62
EXOSC4Q9NPD3 SNORD77.2-201ENST00000391045 68 ntBASIC-1.29□□□□□ -2.62
EXOSC4Q9NPD3 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.29□□□□□ -2.62
EXOSC4Q9NPD3 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.29□□□□□ -2.62
EXOSC4Q9NPD3 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.29□□□□□ -2.62
EXOSC4Q9NPD3 RNU6-209P-201ENST00000384118 107 ntBASIC-1.3□□□□□ -2.62
EXOSC4Q9NPD3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
EXOSC4Q9NPD3 AL021921.1-201ENST00000442774 93 ntBASIC-1.3□□□□□ -2.62
EXOSC4Q9NPD3 RNU7-88P-201ENST00000458752 63 ntBASIC-1.3□□□□□ -2.62
EXOSC4Q9NPD3 RNU6-656P-201ENST00000516785 107 ntBASIC-1.3□□□□□ -2.62
EXOSC4Q9NPD3 AL365222.1-201ENST00000614661 98 ntBASIC-1.3□□□□□ -2.62
EXOSC4Q9NPD3 RNU7-134P-201ENST00000458997 64 ntBASIC-1.31□□□□□ -2.62
EXOSC4Q9NPD3 RNU6-10P-201ENST00000384036 107 ntBASIC-1.32□□□□□ -2.62
EXOSC4Q9NPD3 MIR587-201ENST00000384845 96 ntBASIC-1.32□□□□□ -2.62
EXOSC4Q9NPD3 MIR4306-201ENST00000583390 91 ntBASIC-1.32□□□□□ -2.62
EXOSC4Q9NPD3 AC008267.6-201ENST00000441664 139 ntBASIC-1.33□□□□□ -2.62
EXOSC4Q9NPD3 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.33□□□□□ -2.62
EXOSC4Q9NPD3 MIR6086-201ENST00000638065 55 ntBASIC-1.33□□□□□ -2.62
EXOSC4Q9NPD3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.33□□□□□ -2.62
EXOSC4Q9NPD3 RNU2-51P-201ENST00000410708 197 ntBASIC-1.34□□□□□ -2.62
EXOSC4Q9NPD3 MTATP8P2-201ENST00000435212 202 ntBASIC-1.34□□□□□ -2.62
EXOSC4Q9NPD3 U7.5-201ENST00000517224 61 ntBASIC-1.34□□□□□ -2.62
EXOSC4Q9NPD3 U2.7-201ENST00000619197 100 ntBASIC-1.34□□□□□ -2.62
EXOSC4Q9NPD3 RNU6-766P-201ENST00000362478 107 ntBASIC-1.35□□□□□ -2.63
EXOSC4Q9NPD3 MIR548C-201ENST00000384815 97 ntBASIC-1.35□□□□□ -2.63
EXOSC4Q9NPD3 RNU4-61P-201ENST00000411243 107 ntBASIC-1.35□□□□□ -2.63
EXOSC4Q9NPD3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.35□□□□□ -2.63
EXOSC4Q9NPD3 AL353691.2-201ENST00000443795 59 ntBASIC-1.35□□□□□ -2.63
EXOSC4Q9NPD3 MIR4668-201ENST00000582284 70 ntBASIC-1.35□□□□□ -2.63
EXOSC4Q9NPD3 RNU6-633P-201ENST00000362612 103 ntBASIC-1.36□□□□□ -2.63
EXOSC4Q9NPD3 SNORD115-37-201ENST00000363768 82 ntBASIC-1.36□□□□□ -2.63
EXOSC4Q9NPD3 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.36□□□□□ -2.63
EXOSC4Q9NPD3 RNU6-246P-201ENST00000384702 107 ntBASIC-1.36□□□□□ -2.63
EXOSC4Q9NPD3 MIR507-201ENST00000385234 94 ntBASIC-1.36□□□□□ -2.63
EXOSC4Q9NPD3 MIR8485-201ENST00000401372 91 ntBASIC-1.36□□□□□ -2.63
EXOSC4Q9NPD3 RNU6-589P-201ENST00000516485 107 ntBASIC-1.36□□□□□ -2.63
EXOSC4Q9NPD3 AP002795.1-201ENST00000534879 84 ntBASIC-1.36□□□□□ -2.63
EXOSC4Q9NPD3 MIR6818-201ENST00000621576 65 ntBASIC-1.36□□□□□ -2.63
EXOSC4Q9NPD3 RNU6-645P-201ENST00000364649 106 ntBASIC-1.37□□□□□ -2.63
EXOSC4Q9NPD3 RNU6-30P-201ENST00000384561 107 ntBASIC-1.37□□□□□ -2.63
EXOSC4Q9NPD3 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.37□□□□□ -2.63
EXOSC4Q9NPD3 RNU6-732P-201ENST00000516033 103 ntBASIC-1.37□□□□□ -2.63
EXOSC4Q9NPD3 RNA5SP26-201ENST00000362406 119 ntBASIC-1.38□□□□□ -2.63
EXOSC4Q9NPD3 RNU6-330P-201ENST00000363015 107 ntBASIC-1.38□□□□□ -2.63
EXOSC4Q9NPD3 SNORD19-201ENST00000391191 68 ntBASIC-1.38□□□□□ -2.63
EXOSC4Q9NPD3 RNU6-479P-201ENST00000516348 105 ntBASIC-1.38□□□□□ -2.63
EXOSC4Q9NPD3 MIR3165-201ENST00000579874 75 ntBASIC-1.38□□□□□ -2.63
EXOSC4Q9NPD3 RNA5SP192-201ENST00000364404 120 ntBASIC-1.39□□□□□ -2.63
EXOSC4Q9NPD3 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.39□□□□□ -2.63
EXOSC4Q9NPD3 AC093729.1-201ENST00000513074 128 ntBASIC-1.39□□□□□ -2.63
EXOSC4Q9NPD3 MIR450A1-201ENST00000362262 91 ntBASIC-1.4□□□□□ -2.63
EXOSC4Q9NPD3 RNU6-624P-201ENST00000363411 107 ntBASIC-1.4□□□□□ -2.63
EXOSC4Q9NPD3 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.4□□□□□ -2.63
EXOSC4Q9NPD3 MIR29B1-201ENST00000385015 81 ntBASIC-1.4□□□□□ -2.63
EXOSC4Q9NPD3 snoU13.19-201ENST00000459148 104 ntBASIC-1.4□□□□□ -2.63
EXOSC4Q9NPD3 RNU6-807P-201ENST00000516805 107 ntBASIC-1.4□□□□□ -2.63
EXOSC4Q9NPD3 MIR3115-201ENST00000577915 68 ntBASIC-1.4□□□□□ -2.63
EXOSC4Q9NPD3 AC132825.6-201ENST00000638861 357 ntBASIC-1.4□□□□□ -2.63
EXOSC4Q9NPD3 RNU6-81P-201ENST00000365608 104 ntBASIC-1.41□□□□□ -2.64
EXOSC4Q9NPD3 RNU6-576P-201ENST00000390854 102 ntBASIC-1.41□□□□□ -2.64
EXOSC4Q9NPD3 RNU6-706P-201ENST00000517229 104 ntBASIC-1.41□□□□□ -2.64
EXOSC4Q9NPD3 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.41□□□□□ -2.64
EXOSC4Q9NPD3 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.42□□□□□ -2.64
EXOSC4Q9NPD3 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.42□□□□□ -2.64
EXOSC4Q9NPD3 RNU6-267P-201ENST00000516714 103 ntBASIC-1.42□□□□□ -2.64
EXOSC4Q9NPD3 RNU6-158P-201ENST00000517104 100 ntBASIC-1.42□□□□□ -2.64
EXOSC4Q9NPD3 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.42□□□□□ -2.64
EXOSC4Q9NPD3 MIR3675-201ENST00000583661 73 ntBASIC-1.42□□□□□ -2.64
EXOSC4Q9NPD3 MIR5683-201ENST00000636514 76 ntBASIC-1.42□□□□□ -2.64
EXOSC4Q9NPD3 RPL35AP4-201ENST00000412007 102 ntBASIC-1.43□□□□□ -2.64
EXOSC4Q9NPD3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.43□□□□□ -2.64
EXOSC4Q9NPD3 MIR2052-201ENST00000636055 55 ntBASIC-1.43□□□□□ -2.64
EXOSC4Q9NPD3 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.44□□□□□ -2.64
EXOSC4Q9NPD3 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.44□□□□□ -2.64
EXOSC4Q9NPD3 MIR548Q-201ENST00000408404 100 ntBASIC-1.44□□□□□ -2.64
EXOSC4Q9NPD3 AL031737.1-201ENST00000450125 223 ntBASIC-1.44□□□□□ -2.64
EXOSC4Q9NPD3 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.44□□□□□ -2.64
EXOSC4Q9NPD3 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.45□□□□□ -2.64
EXOSC4Q9NPD3 SNORD116-22-201ENST00000384430 92 ntBASIC-1.45□□□□□ -2.64
EXOSC4Q9NPD3 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.45□□□□□ -2.64
EXOSC4Q9NPD3 MIR527-201ENST00000385244 85 ntBASIC-1.45□□□□□ -2.64
EXOSC4Q9NPD3 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.45□□□□□ -2.64
EXOSC4Q9NPD3 RNU6-402P-201ENST00000410678 103 ntBASIC-1.45□□□□□ -2.64
EXOSC4Q9NPD3 RNU6-982P-201ENST00000516216 102 ntBASIC-1.45□□□□□ -2.64
EXOSC4Q9NPD3 RNA5SP67-201ENST00000516422 131 ntBASIC-1.45□□□□□ -2.64
EXOSC4Q9NPD3 MIR4490-201ENST00000582647 84 ntBASIC-1.45□□□□□ -2.64
EXOSC4Q9NPD3 RNU6-219P-201ENST00000364728 107 ntBASIC-1.46□□□□□ -2.64
EXOSC4Q9NPD3 AL078595.1-201ENST00000404458 226 ntBASIC-1.46□□□□□ -2.64
EXOSC4Q9NPD3 MIR548BB-201ENST00000626714 66 ntBASIC-1.46□□□□□ -2.64
EXOSC4Q9NPD3 RNU6-478P-201ENST00000363904 110 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 296.2 ms