Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 MIR140-201ENST00000385282 100 ntBASIC0.91□□□□□ -2.26
RC3H2Q9HBD1 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
RC3H2Q9HBD1 RNU6-175P-201ENST00000516896 107 ntBASIC0.91□□□□□ -2.26
RC3H2Q9HBD1 RNU7-188P-201ENST00000517063 64 ntBASIC0.91□□□□□ -2.26
RC3H2Q9HBD1 SNORD118-201ENST00000363593 134 ntBASIC0.9□□□□□ -2.27
RC3H2Q9HBD1 MIR527-201ENST00000385244 85 ntBASIC0.9□□□□□ -2.27
RC3H2Q9HBD1 SNORD115-25-201ENST00000362619 82 ntBASIC0.89□□□□□ -2.27
RC3H2Q9HBD1 SNORD1B-201ENST00000363091 84 ntBASIC0.89□□□□□ -2.27
RC3H2Q9HBD1 RNU6-35P-201ENST00000384530 107 ntBASIC0.89□□□□□ -2.27
RC3H2Q9HBD1 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
RC3H2Q9HBD1 RNU7-154P-201ENST00000516194 62 ntBASIC0.89□□□□□ -2.27
RC3H2Q9HBD1 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.89□□□□□ -2.27
RC3H2Q9HBD1 MIR7110-201ENST00000612638 86 ntBASIC0.89□□□□□ -2.27
RC3H2Q9HBD1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.89□□□□□ -2.27
RC3H2Q9HBD1 SNORD114-29-201ENST00000364819 70 ntBASIC0.88□□□□□ -2.27
RC3H2Q9HBD1 MIRLET7B-201ENST00000385140 83 ntBASIC0.88□□□□□ -2.27
RC3H2Q9HBD1 MIR501-201ENST00000390204 84 ntBASIC0.88□□□□□ -2.27
RC3H2Q9HBD1 MIR6755-201ENST00000619993 66 ntBASIC0.88□□□□□ -2.27
RC3H2Q9HBD1 MIR216A-201ENST00000385063 110 ntBASIC0.87□□□□□ -2.27
RC3H2Q9HBD1 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.87□□□□□ -2.27
RC3H2Q9HBD1 PSMC1P5-201ENST00000512850 177 ntBASIC0.87□□□□□ -2.27
RC3H2Q9HBD1 RNU4-54P-201ENST00000516428 129 ntBASIC0.87□□□□□ -2.27
RC3H2Q9HBD1 MIR4677-201ENST00000584153 80 ntBASIC0.87□□□□□ -2.27
RC3H2Q9HBD1 Y_RNA.109-201ENST00000363215 102 ntBASIC0.86□□□□□ -2.27
RC3H2Q9HBD1 SNORA2A-201ENST00000383885 135 ntBASIC0.86□□□□□ -2.27
RC3H2Q9HBD1 RNU6-110P-201ENST00000384508 104 ntBASIC0.86□□□□□ -2.27
RC3H2Q9HBD1 RNU6-246P-201ENST00000384702 107 ntBASIC0.86□□□□□ -2.27
RC3H2Q9HBD1 SNORA40B-201ENST00000385573 128 ntBASIC0.86□□□□□ -2.27
RC3H2Q9HBD1 SNORD2-201ENST00000459163 69 ntBASIC0.86□□□□□ -2.27
RC3H2Q9HBD1 MIR6513-201ENST00000621188 64 ntBASIC0.86□□□□□ -2.27
RC3H2Q9HBD1 RNU6-502P-201ENST00000362419 108 ntBASIC0.85□□□□□ -2.27
RC3H2Q9HBD1 RNU6-810P-201ENST00000364001 107 ntBASIC0.85□□□□□ -2.27
RC3H2Q9HBD1 RNU4-33P-201ENST00000364316 85 ntBASIC0.85□□□□□ -2.27
RC3H2Q9HBD1 Y_RNA.423-201ENST00000384057 113 ntBASIC0.85□□□□□ -2.27
RC3H2Q9HBD1 SNORA40.8-201ENST00000411034 126 ntBASIC0.85□□□□□ -2.27
RC3H2Q9HBD1 RNU6-229P-201ENST00000516614 102 ntBASIC0.85□□□□□ -2.27
RC3H2Q9HBD1 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
RC3H2Q9HBD1 RNU6-172P-201ENST00000411000 93 ntBASIC0.84□□□□□ -2.27
RC3H2Q9HBD1 U7.6-201ENST00000610841 64 ntBASIC0.84□□□□□ -2.27
RC3H2Q9HBD1 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.84□□□□□ -2.27
RC3H2Q9HBD1 RNU6-1036P-201ENST00000383959 104 ntBASIC0.83□□□□□ -2.28
RC3H2Q9HBD1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
RC3H2Q9HBD1 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
RC3H2Q9HBD1 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
RC3H2Q9HBD1 MIR518A1-201ENST00000385068 85 ntBASIC0.82□□□□□ -2.28
RC3H2Q9HBD1 MIR548X-201ENST00000580069 75 ntBASIC0.82□□□□□ -2.28
RC3H2Q9HBD1 RN7SL660P-201ENST00000614852 299 ntBASIC0.82□□□□□ -2.28
RC3H2Q9HBD1 RNU6-458P-201ENST00000384179 107 ntBASIC0.81□□□□□ -2.28
RC3H2Q9HBD1 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
RC3H2Q9HBD1 RNA5SP470-201ENST00000516463 106 ntBASIC0.81□□□□□ -2.28
RC3H2Q9HBD1 RNU6-782P-201ENST00000516852 104 ntBASIC0.81□□□□□ -2.28
RC3H2Q9HBD1 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
RC3H2Q9HBD1 U6.58-201ENST00000613107 107 ntBASIC0.81□□□□□ -2.28
RC3H2Q9HBD1 MIR936-201ENST00000401264 98 ntBASIC0.8□□□□□ -2.28
RC3H2Q9HBD1 MIR4490-201ENST00000582647 84 ntBASIC0.8□□□□□ -2.28
RC3H2Q9HBD1 MIR508-201ENST00000384857 115 ntBASIC0.79□□□□□ -2.28
RC3H2Q9HBD1 RNA5SP193-201ENST00000410353 107 ntBASIC0.79□□□□□ -2.28
RC3H2Q9HBD1 SNORD71-201ENST00000411292 86 ntBASIC0.79□□□□□ -2.28
RC3H2Q9HBD1 MIR3925-201ENST00000584674 77 ntBASIC0.79□□□□□ -2.28
RC3H2Q9HBD1 MIR6835-201ENST00000621552 64 ntBASIC0.79□□□□□ -2.28
RC3H2Q9HBD1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
RC3H2Q9HBD1 MIR760-201ENST00000390220 80 ntBASIC0.78□□□□□ -2.28
RC3H2Q9HBD1 RNU6-930P-201ENST00000390938 100 ntBASIC0.78□□□□□ -2.28
RC3H2Q9HBD1 MIR548F3-201ENST00000408509 87 ntBASIC0.78□□□□□ -2.28
RC3H2Q9HBD1 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.78□□□□□ -2.28
RC3H2Q9HBD1 AC084368.1-201ENST00000620935 65 ntBASIC0.78□□□□□ -2.28
RC3H2Q9HBD1 MIR876-201ENST00000401147 81 ntBASIC0.77□□□□□ -2.29
RC3H2Q9HBD1 AC098934.3-201ENST00000430450 190 ntBASIC0.77□□□□□ -2.29
RC3H2Q9HBD1 RNU6-848P-201ENST00000515948 107 ntBASIC0.77□□□□□ -2.29
RC3H2Q9HBD1 RNU6-617P-201ENST00000516147 107 ntBASIC0.77□□□□□ -2.29
RC3H2Q9HBD1 RNU6-473P-201ENST00000516164 107 ntBASIC0.77□□□□□ -2.29
RC3H2Q9HBD1 RNU6-1049P-201ENST00000516414 107 ntBASIC0.77□□□□□ -2.29
RC3H2Q9HBD1 AL590095.2-201ENST00000604136 117 ntBASIC0.77□□□□□ -2.29
RC3H2Q9HBD1 SNORD115-23-201ENST00000364461 82 ntBASIC0.76□□□□□ -2.29
RC3H2Q9HBD1 MIR4711-201ENST00000578274 70 ntBASIC0.76□□□□□ -2.29
RC3H2Q9HBD1 AL353803.5-201ENST00000599815 141 ntBASIC0.76□□□□□ -2.29
RC3H2Q9HBD1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
RC3H2Q9HBD1 RNU6-598P-201ENST00000364017 105 ntBASIC0.75□□□□□ -2.29
RC3H2Q9HBD1 U2.18-201ENST00000622185 84 ntBASIC0.75□□□□□ -2.29
RC3H2Q9HBD1 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
RC3H2Q9HBD1 MIR429-201ENST00000362106 83 ntBASIC0.74□□□□□ -2.29
RC3H2Q9HBD1 RNA5SP128-201ENST00000365305 116 ntBASIC0.74□□□□□ -2.29
RC3H2Q9HBD1 MIR193B-201ENST00000384907 83 ntBASIC0.74□□□□□ -2.29
RC3H2Q9HBD1 MIR499B-201ENST00000636498 73 ntBASIC0.74□□□□□ -2.29
RC3H2Q9HBD1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
RC3H2Q9HBD1 MIR579-201ENST00000385221 98 ntBASIC0.73□□□□□ -2.29
RC3H2Q9HBD1 Y_RNA.698-201ENST00000516798 118 ntBASIC0.73□□□□□ -2.29
RC3H2Q9HBD1 RNU6-419P-201ENST00000517030 63 ntBASIC0.73□□□□□ -2.29
RC3H2Q9HBD1 MIR1273G-201ENST00000577677 100 ntBASIC0.72□□□□□ -2.29
RC3H2Q9HBD1 RNU6-924P-201ENST00000362926 108 ntBASIC0.71□□□□□ -2.3
RC3H2Q9HBD1 SNORD114-23-201ENST00000363536 72 ntBASIC0.71□□□□□ -2.3
RC3H2Q9HBD1 RNA5SP499-201ENST00000363982 119 ntBASIC0.71□□□□□ -2.3
RC3H2Q9HBD1 MIR106A-201ENST00000384870 81 ntBASIC0.71□□□□□ -2.3
RC3H2Q9HBD1 Y_RNA.374-201ENST00000365606 101 ntBASIC0.7□□□□□ -2.3
RC3H2Q9HBD1 RNU7-151P-201ENST00000516930 53 ntBASIC0.7□□□□□ -2.3
RC3H2Q9HBD1 AP000676.1-201ENST00000533307 52 ntBASIC0.7□□□□□ -2.3
RC3H2Q9HBD1 AC010487.4-201ENST00000637027 61 ntBASIC0.7□□□□□ -2.3
RC3H2Q9HBD1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
RC3H2Q9HBD1 RNU7-129P-201ENST00000516128 62 ntBASIC0.69□□□□□ -2.3
RC3H2Q9HBD1 RNA5SP347-201ENST00000362445 119 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 186.5 ms