Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AL049779.4-201ENST00000604500 156 ntBASIC2.17□□□□□ -2.06
RNF39Q9H2S5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RNF39Q9H2S5 RNA5SP393-201ENST00000363423 117 ntBASIC2.16□□□□□ -2.06
RNF39Q9H2S5 SNORA42.1-201ENST00000363515 137 ntBASIC2.16□□□□□ -2.06
RNF39Q9H2S5 Y_RNA.423-201ENST00000384057 113 ntBASIC2.16□□□□□ -2.06
RNF39Q9H2S5 MIR17-201ENST00000385012 84 ntBASIC2.16□□□□□ -2.06
RNF39Q9H2S5 MIR124-2-201ENST00000385081 109 ntBASIC2.16□□□□□ -2.06
RNF39Q9H2S5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.16□□□□□ -2.06
RNF39Q9H2S5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.06
RNF39Q9H2S5 MIRLET7G-201ENST00000362280 84 ntBASIC2.15□□□□□ -2.07
RNF39Q9H2S5 SNORD99-201ENST00000408612 74 ntBASIC2.15□□□□□ -2.07
RNF39Q9H2S5 AC096531.1-201ENST00000419107 107 ntBASIC2.15□□□□□ -2.07
RNF39Q9H2S5 RNU6-295P-201ENST00000516901 104 ntBASIC2.15□□□□□ -2.07
RNF39Q9H2S5 MIR5683-201ENST00000636514 76 ntBASIC2.15□□□□□ -2.07
RNF39Q9H2S5 RNA5SP160-201ENST00000364866 120 ntBASIC2.14□□□□□ -2.07
RNF39Q9H2S5 MIR876-201ENST00000401147 81 ntBASIC2.14□□□□□ -2.07
RNF39Q9H2S5 HMGN2P19-201ENST00000425149 265 ntBASIC2.14□□□□□ -2.07
RNF39Q9H2S5 MIR6845-201ENST00000613182 61 ntBASIC2.14□□□□□ -2.07
RNF39Q9H2S5 RNA5SP98-201ENST00000363158 137 ntBASIC2.13□□□□□ -2.07
RNF39Q9H2S5 Y_RNA.164-201ENST00000363709 102 ntBASIC2.13□□□□□ -2.07
RNF39Q9H2S5 Y_RNA.223-201ENST00000364290 113 ntBASIC2.13□□□□□ -2.07
RNF39Q9H2S5 SNORD45C-201ENST00000383893 79 ntBASIC2.13□□□□□ -2.07
RNF39Q9H2S5 SNORD124-201ENST00000459577 104 ntBASIC2.13□□□□□ -2.07
RNF39Q9H2S5 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.13□□□□□ -2.07
RNF39Q9H2S5 MIR581-201ENST00000384895 96 ntBASIC2.12□□□□□ -2.07
RNF39Q9H2S5 AC003989.2-201ENST00000440224 169 ntBASIC2.12□□□□□ -2.07
RNF39Q9H2S5 MIR19B1-201ENST00000384829 87 ntBASIC2.11□□□□□ -2.07
RNF39Q9H2S5 RNA5SP517-201ENST00000364724 117 ntBASIC2.09□□□□□ -2.07
RNF39Q9H2S5 MIR583-201ENST00000384846 75 ntBASIC2.09□□□□□ -2.07
RNF39Q9H2S5 RNA5SP222-201ENST00000411039 105 ntBASIC2.09□□□□□ -2.07
RNF39Q9H2S5 RNA5SP182-201ENST00000516064 82 ntBASIC2.09□□□□□ -2.07
RNF39Q9H2S5 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC2.09□□□□□ -2.07
RNF39Q9H2S5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RNF39Q9H2S5 MIR379-201ENST00000362218 67 ntBASIC2.08□□□□□ -2.08
RNF39Q9H2S5 RNA5SP325-201ENST00000363756 130 ntBASIC2.08□□□□□ -2.08
RNF39Q9H2S5 MIR5704-201ENST00000584029 77 ntBASIC2.08□□□□□ -2.08
RNF39Q9H2S5 SNORA25.18-201ENST00000607153 114 ntBASIC2.08□□□□□ -2.08
RNF39Q9H2S5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RNF39Q9H2S5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
RNF39Q9H2S5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
RNF39Q9H2S5 MIR3925-201ENST00000584674 77 ntBASIC2.07□□□□□ -2.08
RNF39Q9H2S5 FTX_4.1-201ENST00000616291 147 ntBASIC2.07□□□□□ -2.08
RNF39Q9H2S5 RNA5SP327-201ENST00000362494 101 ntBASIC2.06□□□□□ -2.08
RNF39Q9H2S5 RNU1-17P-201ENST00000363022 152 ntBASIC2.06□□□□□ -2.08
RNF39Q9H2S5 RNA5SP82-201ENST00000516707 92 ntBASIC2.06□□□□□ -2.08
RNF39Q9H2S5 MIR8068-201ENST00000618032 68 ntBASIC2.06□□□□□ -2.08
RNF39Q9H2S5 AC013734.1-201ENST00000619329 111 ntBASIC2.06□□□□□ -2.08
RNF39Q9H2S5 RNU6-1053P-201ENST00000515930 101 ntBASIC2.05□□□□□ -2.08
RNF39Q9H2S5 RNA5SP255-201ENST00000516370 107 ntBASIC2.05□□□□□ -2.08
RNF39Q9H2S5 MIR9-3-201ENST00000385084 90 ntBASIC2.04□□□□□ -2.08
RNF39Q9H2S5 MIR144-201ENST00000384886 86 ntBASIC2.03□□□□□ -2.08
RNF39Q9H2S5 RNU6-717P-201ENST00000459076 104 ntBASIC2.03□□□□□ -2.08
RNF39Q9H2S5 AC087343.1-201ENST00000477341 475 ntBASIC2.03□□□□□ -2.08
RNF39Q9H2S5 MIR4498-201ENST00000577599 66 ntBASIC2.03□□□□□ -2.08
RNF39Q9H2S5 MIR6854-201ENST00000614935 69 ntBASIC2.03□□□□□ -2.08
RNF39Q9H2S5 RNU6-900P-201ENST00000384498 102 ntBASIC2.02□□□□□ -2.09
RNF39Q9H2S5 RNA5SP489-201ENST00000410986 109 ntBASIC2.02□□□□□ -2.09
RNF39Q9H2S5 AL353691.2-201ENST00000443795 59 ntBASIC2.02□□□□□ -2.09
RNF39Q9H2S5 MIR8081-201ENST00000611533 95 ntBASIC2.02□□□□□ -2.09
RNF39Q9H2S5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.02□□□□□ -2.09
RNF39Q9H2S5 RNU6-1169P-201ENST00000363537 103 ntBASIC2.01□□□□□ -2.09
RNF39Q9H2S5 SNORD118-201ENST00000363593 134 ntBASIC2.01□□□□□ -2.09
RNF39Q9H2S5 Y_RNA.226-201ENST00000364337 114 ntBASIC2.01□□□□□ -2.09
RNF39Q9H2S5 MIR760-201ENST00000390220 80 ntBASIC2.01□□□□□ -2.09
RNF39Q9H2S5 MIR548AJ2-201ENST00000408539 92 ntBASIC2□□□□□ -2.09
RNF39Q9H2S5 RNA5SP338-201ENST00000410495 85 ntBASIC2□□□□□ -2.09
RNF39Q9H2S5 RNU6-848P-201ENST00000515948 107 ntBASIC2□□□□□ -2.09
RNF39Q9H2S5 RNU6-617P-201ENST00000516147 107 ntBASIC2□□□□□ -2.09
RNF39Q9H2S5 RNU6-473P-201ENST00000516164 107 ntBASIC2□□□□□ -2.09
RNF39Q9H2S5 RNU6-1049P-201ENST00000516414 107 ntBASIC2□□□□□ -2.09
RNF39Q9H2S5 MIR6895-201ENST00000613497 78 ntBASIC2□□□□□ -2.09
RNF39Q9H2S5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC2□□□□□ -2.09
RNF39Q9H2S5 MIR676-201ENST00000390702 67 ntBASIC1.99□□□□□ -2.09
RNF39Q9H2S5 RPL35AP4-201ENST00000412007 102 ntBASIC1.99□□□□□ -2.09
RNF39Q9H2S5 U6.97-201ENST00000636904 101 ntBASIC1.99□□□□□ -2.09
RNF39Q9H2S5 RNU6-321P-201ENST00000410912 106 ntBASIC1.98□□□□□ -2.09
RNF39Q9H2S5 AC108667.1-201ENST00000428618 249 ntBASIC1.98□□□□□ -2.09
RNF39Q9H2S5 RNA5SP233-201ENST00000459153 113 ntBASIC1.98□□□□□ -2.09
RNF39Q9H2S5 SCARNA11.2-201ENST00000517183 154 ntBASIC1.98□□□□□ -2.09
RNF39Q9H2S5 SNORD114-24-201ENST00000365029 72 ntBASIC1.97□□□□□ -2.09
RNF39Q9H2S5 ACA64.5-201ENST00000516207 127 ntBASIC1.97□□□□□ -2.09
RNF39Q9H2S5 MIR5694-201ENST00000581190 76 ntBASIC1.97□□□□□ -2.09
RNF39Q9H2S5 MIR5087-201ENST00000635826 76 ntBASIC1.97□□□□□ -2.09
RNF39Q9H2S5 MIR1287-201ENST00000408492 90 ntBASIC1.96□□□□□ -2.1
RNF39Q9H2S5 AP000553.5-201ENST00000641933 54 ntBASIC1.96□□□□□ -2.1
RNF39Q9H2S5 RNU6-929P-201ENST00000384429 107 ntBASIC1.95□□□□□ -2.1
RNF39Q9H2S5 snoU13.31-201ENST00000607291 104 ntBASIC1.95□□□□□ -2.1
RNF39Q9H2S5 MIR7111-201ENST00000619751 72 ntBASIC1.95□□□□□ -2.1
RNF39Q9H2S5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RNF39Q9H2S5 RNA5SP37-201ENST00000365420 130 ntBASIC1.94□□□□□ -2.1
RNF39Q9H2S5 MIR618-201ENST00000385287 98 ntBASIC1.94□□□□□ -2.1
RNF39Q9H2S5 MIR378A-201ENST00000362177 66 ntBASIC1.93□□□□□ -2.1
RNF39Q9H2S5 SNORA16.1-201ENST00000364597 132 ntBASIC1.93□□□□□ -2.1
RNF39Q9H2S5 RNA5SP190-201ENST00000365222 118 ntBASIC1.93□□□□□ -2.1
RNF39Q9H2S5 SNORA36.2-201ENST00000384004 127 ntBASIC1.93□□□□□ -2.1
RNF39Q9H2S5 SNORA26.4-201ENST00000391188 123 ntBASIC1.93□□□□□ -2.1
RNF39Q9H2S5 SNORD13-201ENST00000459299 104 ntBASIC1.93□□□□□ -2.1
RNF39Q9H2S5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
RNF39Q9H2S5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RNF39Q9H2S5 RNA5SP128-201ENST00000365305 116 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 221.4 ms