Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RNU6-620P-201ENST00000384017 96 ntBASIC1.17□□□□□ -2.22
KRTAP3-3Q9BYR6 SNORA48.7-201ENST00000391302 135 ntBASIC1.17□□□□□ -2.22
KRTAP3-3Q9BYR6 SNORD109B-201ENST00000458961 67 ntBASIC1.17□□□□□ -2.22
KRTAP3-3Q9BYR6 SNORD109A-201ENST00000459128 67 ntBASIC1.17□□□□□ -2.22
KRTAP3-3Q9BYR6 RNU6-863P-201ENST00000515989 104 ntBASIC1.17□□□□□ -2.22
KRTAP3-3Q9BYR6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.17□□□□□ -2.22
KRTAP3-3Q9BYR6 RNA5SP82-201ENST00000516707 92 ntBASIC1.17□□□□□ -2.22
KRTAP3-3Q9BYR6 RNU6ATAC22P-201ENST00000516794 89 ntBASIC1.17□□□□□ -2.22
KRTAP3-3Q9BYR6 AC120024.2-201ENST00000576526 175 ntBASIC1.17□□□□□ -2.22
KRTAP3-3Q9BYR6 MIR5694-201ENST00000581190 76 ntBASIC1.17□□□□□ -2.22
KRTAP3-3Q9BYR6 AL049779.4-201ENST00000604500 156 ntBASIC1.17□□□□□ -2.22
KRTAP3-3Q9BYR6 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.16□□□□□ -2.22
KRTAP3-3Q9BYR6 RNU6-859P-201ENST00000362728 107 ntBASIC1.16□□□□□ -2.22
KRTAP3-3Q9BYR6 AC104435.1-201ENST00000483483 166 ntBASIC1.16□□□□□ -2.22
KRTAP3-3Q9BYR6 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC1.16□□□□□ -2.22
KRTAP3-3Q9BYR6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.22
KRTAP3-3Q9BYR6 SNORD26-201ENST00000384147 75 ntBASIC1.15□□□□□ -2.23
KRTAP3-3Q9BYR6 SNORD56B-201ENST00000384713 71 ntBASIC1.15□□□□□ -2.23
KRTAP3-3Q9BYR6 SNORD18.2-201ENST00000459604 70 ntBASIC1.15□□□□□ -2.23
KRTAP3-3Q9BYR6 AC026436.1-201ENST00000510537 270 ntBASIC1.15□□□□□ -2.23
KRTAP3-3Q9BYR6 MIR1254-2-201ENST00000579553 63 ntBASIC1.15□□□□□ -2.23
KRTAP3-3Q9BYR6 AL033523.1-201ENST00000605153 153 ntBASIC1.15□□□□□ -2.23
KRTAP3-3Q9BYR6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.15□□□□□ -2.23
KRTAP3-3Q9BYR6 MIR1291-201ENST00000627649 87 ntBASIC1.15□□□□□ -2.23
KRTAP3-3Q9BYR6 RNU6-912P-201ENST00000363800 104 ntBASIC1.14□□□□□ -2.23
KRTAP3-3Q9BYR6 RNU6-284P-201ENST00000411105 106 ntBASIC1.14□□□□□ -2.23
KRTAP3-3Q9BYR6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
KRTAP3-3Q9BYR6 MIR5002-201ENST00000584713 97 ntBASIC1.13□□□□□ -2.23
KRTAP3-3Q9BYR6 AC046143.2-201ENST00000609789 160 ntBASIC1.13□□□□□ -2.23
KRTAP3-3Q9BYR6 MIR6514-201ENST00000622549 70 ntBASIC1.13□□□□□ -2.23
KRTAP3-3Q9BYR6 MIR6766-201ENST00000622641 72 ntBASIC1.13□□□□□ -2.23
KRTAP3-3Q9BYR6 SNORD114-30-201ENST00000364448 72 ntBASIC1.12□□□□□ -2.23
KRTAP3-3Q9BYR6 CR383656.4-201ENST00000546909 122 ntBASIC1.12□□□□□ -2.23
KRTAP3-3Q9BYR6 MIR5007-201ENST00000583098 95 ntBASIC1.12□□□□□ -2.23
KRTAP3-3Q9BYR6 Y_RNA.781-201ENST00000620301 103 ntBASIC1.12□□□□□ -2.23
KRTAP3-3Q9BYR6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
KRTAP3-3Q9BYR6 RNA5SP68-201ENST00000363885 119 ntBASIC1.11□□□□□ -2.23
KRTAP3-3Q9BYR6 RNU1-93P-201ENST00000364704 169 ntBASIC1.11□□□□□ -2.23
KRTAP3-3Q9BYR6 RNU6-563P-201ENST00000364872 108 ntBASIC1.11□□□□□ -2.23
KRTAP3-3Q9BYR6 MIR520E-201ENST00000384867 87 ntBASIC1.11□□□□□ -2.23
KRTAP3-3Q9BYR6 MIR128-1-201ENST00000384921 82 ntBASIC1.11□□□□□ -2.23
KRTAP3-3Q9BYR6 SNORA48.2-201ENST00000390926 124 ntBASIC1.11□□□□□ -2.23
KRTAP3-3Q9BYR6 RNA5SP148-201ENST00000516527 94 ntBASIC1.11□□□□□ -2.23
KRTAP3-3Q9BYR6 MIR3944-201ENST00000581277 108 ntBASIC1.11□□□□□ -2.23
KRTAP3-3Q9BYR6 AP000553.5-201ENST00000641933 54 ntBASIC1.11□□□□□ -2.23
KRTAP3-3Q9BYR6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
KRTAP3-3Q9BYR6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
KRTAP3-3Q9BYR6 MIRLET7G-201ENST00000362280 84 ntBASIC1.1□□□□□ -2.23
KRTAP3-3Q9BYR6 MIR208A-201ENST00000362287 71 ntBASIC1.1□□□□□ -2.23
KRTAP3-3Q9BYR6 MIR507-201ENST00000385234 94 ntBASIC1.1□□□□□ -2.23
KRTAP3-3Q9BYR6 MIR548J-201ENST00000408833 112 ntBASIC1.1□□□□□ -2.23
KRTAP3-3Q9BYR6 MIR6817-201ENST00000615588 66 ntBASIC1.1□□□□□ -2.23
KRTAP3-3Q9BYR6 AC093010.3-201ENST00000570269 15214 ntBASIC1.1□□□□□ -2.23
KRTAP3-3Q9BYR6 MIR148A-201ENST00000362215 68 ntBASIC1.09□□□□□ -2.23
KRTAP3-3Q9BYR6 SNORD46.1-201ENST00000364139 104 ntBASIC1.09□□□□□ -2.23
KRTAP3-3Q9BYR6 SNORD74.6-201ENST00000364796 70 ntBASIC1.09□□□□□ -2.23
KRTAP3-3Q9BYR6 MIR144-201ENST00000384886 86 ntBASIC1.09□□□□□ -2.23
KRTAP3-3Q9BYR6 RNA5SP338-201ENST00000410495 85 ntBASIC1.09□□□□□ -2.23
KRTAP3-3Q9BYR6 MIR4319-201ENST00000577285 85 ntBASIC1.09□□□□□ -2.23
KRTAP3-3Q9BYR6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP3-3Q9BYR6 SNORD53-201ENST00000579969 78 ntBASIC1.08□□□□□ -2.24
KRTAP3-3Q9BYR6 MIR196B-201ENST00000384852 84 ntBASIC1.07□□□□□ -2.24
KRTAP3-3Q9BYR6 RNU6-717P-201ENST00000459076 104 ntBASIC1.07□□□□□ -2.24
KRTAP3-3Q9BYR6 MIR92B-201ENST00000607575 96 ntBASIC1.07□□□□□ -2.24
KRTAP3-3Q9BYR6 RNA5SP160-201ENST00000364866 120 ntBASIC1.06□□□□□ -2.24
KRTAP3-3Q9BYR6 RNU6-1340P-201ENST00000384438 107 ntBASIC1.06□□□□□ -2.24
KRTAP3-3Q9BYR6 RNA5SP184-201ENST00000411071 108 ntBASIC1.06□□□□□ -2.24
KRTAP3-3Q9BYR6 RNA5SP200-201ENST00000516360 103 ntBASIC1.06□□□□□ -2.24
KRTAP3-3Q9BYR6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
KRTAP3-3Q9BYR6 RNU6-301P-201ENST00000384277 107 ntBASIC1.05□□□□□ -2.24
KRTAP3-3Q9BYR6 RNA5SP24-201ENST00000516478 95 ntBASIC1.05□□□□□ -2.24
KRTAP3-3Q9BYR6 RNU6-345P-201ENST00000517001 107 ntBASIC1.05□□□□□ -2.24
KRTAP3-3Q9BYR6 SNORA70.24-201ENST00000517233 118 ntBASIC1.05□□□□□ -2.24
KRTAP3-3Q9BYR6 Z82195.2-201ENST00000612348 18351 ntBASIC1.05□□□□□ -2.24
KRTAP3-3Q9BYR6 RNA5SP289-201ENST00000362332 137 ntBASIC1.04□□□□□ -2.24
KRTAP3-3Q9BYR6 MIR4661-201ENST00000582720 75 ntBASIC1.04□□□□□ -2.24
KRTAP3-3Q9BYR6 MIR7106-201ENST00000612419 65 ntBASIC1.04□□□□□ -2.24
KRTAP3-3Q9BYR6 AC006386.2-201ENST00000624491 75 ntBASIC1.04□□□□□ -2.24
KRTAP3-3Q9BYR6 AC012005.1-201ENST00000624575 75 ntBASIC1.04□□□□□ -2.24
KRTAP3-3Q9BYR6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.04□□□□□ -2.24
KRTAP3-3Q9BYR6 RPS29P23-201ENST00000458635 123 ntBASIC1.03□□□□□ -2.24
KRTAP3-3Q9BYR6 MIR4280-201ENST00000582178 76 ntBASIC1.03□□□□□ -2.24
KRTAP3-3Q9BYR6 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP3-3Q9BYR6 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
KRTAP3-3Q9BYR6 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.03□□□□□ -2.24
KRTAP3-3Q9BYR6 SNORA70.4-201ENST00000365509 134 ntBASIC1.02□□□□□ -2.25
KRTAP3-3Q9BYR6 MIR491-201ENST00000384877 84 ntBASIC1.02□□□□□ -2.25
KRTAP3-3Q9BYR6 AC003989.2-201ENST00000440224 169 ntBASIC1.02□□□□□ -2.25
KRTAP3-3Q9BYR6 AC090616.4-201ENST00000448026 115 ntBASIC1.02□□□□□ -2.25
KRTAP3-3Q9BYR6 MIR26B-201ENST00000362251 77 ntBASIC1.01□□□□□ -2.25
KRTAP3-3Q9BYR6 RNU6-1024P-201ENST00000384199 107 ntBASIC1.01□□□□□ -2.25
KRTAP3-3Q9BYR6 RNU6-127P-201ENST00000390897 107 ntBASIC1.01□□□□□ -2.25
KRTAP3-3Q9BYR6 AL445193.1-201ENST00000441183 141 ntBASIC1.01□□□□□ -2.25
KRTAP3-3Q9BYR6 MIR4448-201ENST00000584360 86 ntBASIC1.01□□□□□ -2.25
KRTAP3-3Q9BYR6 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
KRTAP3-3Q9BYR6 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1□□□□□ -2.25
KRTAP3-3Q9BYR6 RNA5SP102-201ENST00000516865 106 ntBASIC1□□□□□ -2.25
KRTAP3-3Q9BYR6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC0.99□□□□□ -2.25
KRTAP3-3Q9BYR6 RNU6-180P-201ENST00000516697 61 ntBASIC0.99□□□□□ -2.25
KRTAP3-3Q9BYR6 MIR6851-201ENST00000617060 67 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 249.4 ms