Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 Y_RNA.423-201ENST00000384057 113 ntBASIC0.59□□□□□ -2.31
LRFN3Q9BTN0 RNU6-863P-201ENST00000515989 104 ntBASIC0.59□□□□□ -2.31
LRFN3Q9BTN0 RNU6-1232P-201ENST00000516299 86 ntBASIC0.59□□□□□ -2.31
LRFN3Q9BTN0 RNU6-542P-201ENST00000516405 103 ntBASIC0.59□□□□□ -2.31
LRFN3Q9BTN0 SNORA33.1-201ENST00000364957 130 ntBASIC0.58□□□□□ -2.32
LRFN3Q9BTN0 MIR6755-201ENST00000619993 66 ntBASIC0.58□□□□□ -2.32
LRFN3Q9BTN0 RNA5SP215-201ENST00000363440 122 ntBASIC0.57□□□□□ -2.32
LRFN3Q9BTN0 AC110620.1-201ENST00000416042 228 ntBASIC0.57□□□□□ -2.32
LRFN3Q9BTN0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
LRFN3Q9BTN0 MIR409-201ENST00000362237 79 ntBASIC0.56□□□□□ -2.32
LRFN3Q9BTN0 MIR20A-201ENST00000362279 71 ntBASIC0.56□□□□□ -2.32
LRFN3Q9BTN0 RNA5SP299-201ENST00000391203 116 ntBASIC0.56□□□□□ -2.32
LRFN3Q9BTN0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.56□□□□□ -2.32
LRFN3Q9BTN0 U7.6-201ENST00000610841 64 ntBASIC0.56□□□□□ -2.32
LRFN3Q9BTN0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
LRFN3Q9BTN0 SNORD114-15-201ENST00000364687 72 ntBASIC0.55□□□□□ -2.32
LRFN3Q9BTN0 MIR548C-201ENST00000384815 97 ntBASIC0.55□□□□□ -2.32
LRFN3Q9BTN0 MIR516B1-201ENST00000385211 90 ntBASIC0.55□□□□□ -2.32
LRFN3Q9BTN0 AC244090.1-201ENST00000441884 93 ntBASIC0.55□□□□□ -2.32
LRFN3Q9BTN0 MIR501-201ENST00000390204 84 ntBASIC0.54□□□□□ -2.32
LRFN3Q9BTN0 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
LRFN3Q9BTN0 RNU6-848P-201ENST00000515948 107 ntBASIC0.54□□□□□ -2.32
LRFN3Q9BTN0 SCARNA21.1-201ENST00000515996 128 ntBASIC0.54□□□□□ -2.32
LRFN3Q9BTN0 RNU6-617P-201ENST00000516147 107 ntBASIC0.54□□□□□ -2.32
LRFN3Q9BTN0 RNU6-473P-201ENST00000516164 107 ntBASIC0.54□□□□□ -2.32
LRFN3Q9BTN0 RNU6-1049P-201ENST00000516414 107 ntBASIC0.54□□□□□ -2.32
LRFN3Q9BTN0 MIR4677-201ENST00000584153 80 ntBASIC0.54□□□□□ -2.32
LRFN3Q9BTN0 U2.7-201ENST00000619197 100 ntBASIC0.54□□□□□ -2.32
LRFN3Q9BTN0 RNU6-669P-201ENST00000365575 107 ntBASIC0.53□□□□□ -2.32
LRFN3Q9BTN0 MIR548V-201ENST00000584165 80 ntBASIC0.53□□□□□ -2.32
LRFN3Q9BTN0 AC090625.1-201ENST00000357130 210 ntBASIC0.52□□□□□ -2.33
LRFN3Q9BTN0 SNORD114-29-201ENST00000364819 70 ntBASIC0.52□□□□□ -2.33
LRFN3Q9BTN0 MIR760-201ENST00000390220 80 ntBASIC0.52□□□□□ -2.33
LRFN3Q9BTN0 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
LRFN3Q9BTN0 RNU7-188P-201ENST00000517063 64 ntBASIC0.52□□□□□ -2.33
LRFN3Q9BTN0 SNORD44.1-201ENST00000363202 61 ntBASIC0.51□□□□□ -2.33
LRFN3Q9BTN0 RNU7-174P-201ENST00000516248 59 ntBASIC0.51□□□□□ -2.33
LRFN3Q9BTN0 RNU6-758P-201ENST00000516292 89 ntBASIC0.51□□□□□ -2.33
LRFN3Q9BTN0 MIR548AD-201ENST00000584780 82 ntBASIC0.51□□□□□ -2.33
LRFN3Q9BTN0 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
LRFN3Q9BTN0 U6.96-201ENST00000636425 70 ntBASIC0.51□□□□□ -2.33
LRFN3Q9BTN0 SNORA25.5-201ENST00000363782 126 ntBASIC0.5□□□□□ -2.33
LRFN3Q9BTN0 RNU6-302P-201ENST00000365249 107 ntBASIC0.5□□□□□ -2.33
LRFN3Q9BTN0 MIR630-201ENST00000384957 97 ntBASIC0.5□□□□□ -2.33
LRFN3Q9BTN0 MIR517B-201ENST00000385102 67 ntBASIC0.5□□□□□ -2.33
LRFN3Q9BTN0 RNU6-175P-201ENST00000516896 107 ntBASIC0.5□□□□□ -2.33
LRFN3Q9BTN0 CYP3A54P-201ENST00000566950 75 ntBASIC0.5□□□□□ -2.33
LRFN3Q9BTN0 MIR4723-201ENST00000585070 81 ntBASIC0.5□□□□□ -2.33
LRFN3Q9BTN0 AC090617.8-201ENST00000623339 167 ntBASIC0.5□□□□□ -2.33
LRFN3Q9BTN0 RNA5SP98-201ENST00000363158 137 ntBASIC0.49□□□□□ -2.33
LRFN3Q9BTN0 RNA5SP192-201ENST00000364404 120 ntBASIC0.49□□□□□ -2.33
LRFN3Q9BTN0 RNA5SP128-201ENST00000365305 116 ntBASIC0.49□□□□□ -2.33
LRFN3Q9BTN0 SNORA49-201ENST00000386157 136 ntBASIC0.49□□□□□ -2.33
LRFN3Q9BTN0 AC084368.1-201ENST00000620935 65 ntBASIC0.49□□□□□ -2.33
LRFN3Q9BTN0 RNU6-698P-201ENST00000363523 107 ntBASIC0.48□□□□□ -2.33
LRFN3Q9BTN0 RNU6-34P-201ENST00000364874 107 ntBASIC0.48□□□□□ -2.33
LRFN3Q9BTN0 MIR92A1-201ENST00000385233 78 ntBASIC0.48□□□□□ -2.33
LRFN3Q9BTN0 SNORD2-201ENST00000459163 69 ntBASIC0.48□□□□□ -2.33
LRFN3Q9BTN0 SNORA68.3-201ENST00000515906 83 ntBASIC0.48□□□□□ -2.33
LRFN3Q9BTN0 IGLVI-20-201ENST00000519296 130 ntBASIC0.48□□□□□ -2.33
LRFN3Q9BTN0 MIR3925-201ENST00000584674 77 ntBASIC0.48□□□□□ -2.33
LRFN3Q9BTN0 MIR499B-201ENST00000636498 73 ntBASIC0.48□□□□□ -2.33
LRFN3Q9BTN0 MIRLET7D-201ENST00000362263 87 ntBASIC0.47□□□□□ -2.33
LRFN3Q9BTN0 Y_RNA.185-201ENST00000363894 100 ntBASIC0.47□□□□□ -2.33
LRFN3Q9BTN0 RNA5SP368-201ENST00000364298 116 ntBASIC0.47□□□□□ -2.33
LRFN3Q9BTN0 RNU6-499P-201ENST00000365615 107 ntBASIC0.47□□□□□ -2.33
LRFN3Q9BTN0 MIR6718-201ENST00000616153 80 ntBASIC0.47□□□□□ -2.33
LRFN3Q9BTN0 U4.4-201ENST00000620626 117 ntBASIC0.47□□□□□ -2.33
LRFN3Q9BTN0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.46□□□□□ -2.34
LRFN3Q9BTN0 SNORA50A-201ENST00000384225 134 ntBASIC0.46□□□□□ -2.34
LRFN3Q9BTN0 SNORA75.1-201ENST00000391130 148 ntBASIC0.46□□□□□ -2.34
LRFN3Q9BTN0 RNU6-337P-201ENST00000391243 106 ntBASIC0.46□□□□□ -2.34
LRFN3Q9BTN0 RNA5SP266-201ENST00000410273 108 ntBASIC0.46□□□□□ -2.34
LRFN3Q9BTN0 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.46□□□□□ -2.34
LRFN3Q9BTN0 RNU7-129P-201ENST00000516128 62 ntBASIC0.46□□□□□ -2.34
LRFN3Q9BTN0 RNU6-92P-201ENST00000605893 104 ntBASIC0.46□□□□□ -2.34
LRFN3Q9BTN0 MIR103A1-201ENST00000362165 78 ntBASIC0.45□□□□□ -2.34
LRFN3Q9BTN0 RNU6-940P-201ENST00000363433 104 ntBASIC0.45□□□□□ -2.34
LRFN3Q9BTN0 SNORD113-2-201ENST00000391082 72 ntBASIC0.45□□□□□ -2.34
LRFN3Q9BTN0 MIR1255B2-201ENST00000408618 67 ntBASIC0.45□□□□□ -2.34
LRFN3Q9BTN0 MIR6773-201ENST00000612812 74 ntBASIC0.45□□□□□ -2.34
LRFN3Q9BTN0 RN7SL660P-201ENST00000614852 299 ntBASIC0.45□□□□□ -2.34
LRFN3Q9BTN0 SNORA9.1-201ENST00000362412 131 ntBASIC0.44□□□□□ -2.34
LRFN3Q9BTN0 RNU6-1036P-201ENST00000383959 104 ntBASIC0.44□□□□□ -2.34
LRFN3Q9BTN0 MIR876-201ENST00000401147 81 ntBASIC0.44□□□□□ -2.34
LRFN3Q9BTN0 RNA5SP67-201ENST00000516422 131 ntBASIC0.44□□□□□ -2.34
LRFN3Q9BTN0 MIR466-201ENST00000580653 84 ntBASIC0.44□□□□□ -2.34
LRFN3Q9BTN0 MIR5190-201ENST00000581537 80 ntBASIC0.44□□□□□ -2.34
LRFN3Q9BTN0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.43□□□□□ -2.34
LRFN3Q9BTN0 MIR633-201ENST00000384821 98 ntBASIC0.43□□□□□ -2.34
LRFN3Q9BTN0 AL021921.1-201ENST00000442774 93 ntBASIC0.43□□□□□ -2.34
LRFN3Q9BTN0 RNU6-518P-201ENST00000516056 96 ntBASIC0.43□□□□□ -2.34
LRFN3Q9BTN0 RNU6-122P-201ENST00000516818 107 ntBASIC0.43□□□□□ -2.34
LRFN3Q9BTN0 SNORD60.1-201ENST00000362451 73 ntBASIC0.42□□□□□ -2.34
LRFN3Q9BTN0 Y_RNA.246-201ENST00000364495 108 ntBASIC0.42□□□□□ -2.34
LRFN3Q9BTN0 Y_RNA.325-201ENST00000365171 122 ntBASIC0.42□□□□□ -2.34
LRFN3Q9BTN0 Y_RNA.457-201ENST00000384237 111 ntBASIC0.42□□□□□ -2.34
LRFN3Q9BTN0 SCARNA11.2-201ENST00000517183 154 ntBASIC0.42□□□□□ -2.34
LRFN3Q9BTN0 MIR519A2-201ENST00000384990 87 ntBASIC0.41□□□□□ -2.34
LRFN3Q9BTN0 RNU6-1246P-201ENST00000391064 107 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms