Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 MIR103A1-201ENST00000362165 78 ntBASIC0.61□□□□□ -2.31
ZKSCAN3Q9BRR0 RNU6-940P-201ENST00000363433 104 ntBASIC0.61□□□□□ -2.31
ZKSCAN3Q9BRR0 RNU6-1036P-201ENST00000383959 104 ntBASIC0.61□□□□□ -2.31
ZKSCAN3Q9BRR0 MIR6773-201ENST00000612812 74 ntBASIC0.61□□□□□ -2.31
ZKSCAN3Q9BRR0 MIR6513-201ENST00000621188 64 ntBASIC0.61□□□□□ -2.31
ZKSCAN3Q9BRR0 RNA5SP192-201ENST00000364404 120 ntBASIC0.6□□□□□ -2.31
ZKSCAN3Q9BRR0 RN7SL660P-201ENST00000614852 299 ntBASIC0.6□□□□□ -2.31
ZKSCAN3Q9BRR0 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
ZKSCAN3Q9BRR0 AC090617.8-201ENST00000623339 167 ntBASIC0.6□□□□□ -2.31
ZKSCAN3Q9BRR0 RNA5SP347-201ENST00000362445 119 ntBASIC0.59□□□□□ -2.31
ZKSCAN3Q9BRR0 SCARNA11.2-201ENST00000517183 154 ntBASIC0.59□□□□□ -2.31
ZKSCAN3Q9BRR0 MIR1255B2-201ENST00000408618 67 ntBASIC0.58□□□□□ -2.32
ZKSCAN3Q9BRR0 RNU6-518P-201ENST00000516056 96 ntBASIC0.58□□□□□ -2.32
ZKSCAN3Q9BRR0 U4.4-201ENST00000620626 117 ntBASIC0.58□□□□□ -2.32
ZKSCAN3Q9BRR0 PVT1_3.1-201ENST00000620853 95 ntBASIC0.58□□□□□ -2.32
ZKSCAN3Q9BRR0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.57□□□□□ -2.32
ZKSCAN3Q9BRR0 SNORD115-25-201ENST00000362619 82 ntBASIC0.57□□□□□ -2.32
ZKSCAN3Q9BRR0 MIR106A-201ENST00000384870 81 ntBASIC0.57□□□□□ -2.32
ZKSCAN3Q9BRR0 MIR216A-201ENST00000385063 110 ntBASIC0.57□□□□□ -2.32
ZKSCAN3Q9BRR0 RNU6-337P-201ENST00000391243 106 ntBASIC0.57□□□□□ -2.32
ZKSCAN3Q9BRR0 MIR936-201ENST00000401264 98 ntBASIC0.57□□□□□ -2.32
ZKSCAN3Q9BRR0 Y_RNA.246-201ENST00000364495 108 ntBASIC0.56□□□□□ -2.32
ZKSCAN3Q9BRR0 RNA5SP193-201ENST00000410353 107 ntBASIC0.56□□□□□ -2.32
ZKSCAN3Q9BRR0 RNU6-122P-201ENST00000516818 107 ntBASIC0.56□□□□□ -2.32
ZKSCAN3Q9BRR0 RNU6-499P-201ENST00000365615 107 ntBASIC0.55□□□□□ -2.32
ZKSCAN3Q9BRR0 RNU6-127P-201ENST00000390897 107 ntBASIC0.55□□□□□ -2.32
ZKSCAN3Q9BRR0 RNU6-782P-201ENST00000516852 104 ntBASIC0.55□□□□□ -2.32
ZKSCAN3Q9BRR0 RNU6-502P-201ENST00000362419 108 ntBASIC0.54□□□□□ -2.32
ZKSCAN3Q9BRR0 RNA5SP62-201ENST00000363457 110 ntBASIC0.54□□□□□ -2.32
ZKSCAN3Q9BRR0 RNU6-815P-201ENST00000384080 113 ntBASIC0.54□□□□□ -2.32
ZKSCAN3Q9BRR0 MIRLET7B-201ENST00000385140 83 ntBASIC0.54□□□□□ -2.32
ZKSCAN3Q9BRR0 RNA5SP470-201ENST00000516463 106 ntBASIC0.54□□□□□ -2.32
ZKSCAN3Q9BRR0 MIR466-201ENST00000580653 84 ntBASIC0.54□□□□□ -2.32
ZKSCAN3Q9BRR0 AC090625.1-201ENST00000357130 210 ntBASIC0.53□□□□□ -2.32
ZKSCAN3Q9BRR0 AC114737.2-201ENST00000421583 173 ntBASIC0.53□□□□□ -2.32
ZKSCAN3Q9BRR0 MIR4711-201ENST00000578274 70 ntBASIC0.53□□□□□ -2.32
ZKSCAN3Q9BRR0 SNORD60.1-201ENST00000362451 73 ntBASIC0.52□□□□□ -2.33
ZKSCAN3Q9BRR0 RNU7-154P-201ENST00000516194 62 ntBASIC0.52□□□□□ -2.33
ZKSCAN3Q9BRR0 AC069113.3-201ENST00000521019 150 ntBASIC0.52□□□□□ -2.33
ZKSCAN3Q9BRR0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
ZKSCAN3Q9BRR0 MIR519A2-201ENST00000384990 87 ntBASIC0.51□□□□□ -2.33
ZKSCAN3Q9BRR0 RNA5SP98-201ENST00000363158 137 ntBASIC0.5□□□□□ -2.33
ZKSCAN3Q9BRR0 Y_RNA.325-201ENST00000365171 122 ntBASIC0.5□□□□□ -2.33
ZKSCAN3Q9BRR0 AC108740.1-201ENST00000498629 225 ntBASIC0.5□□□□□ -2.33
ZKSCAN3Q9BRR0 RNA5SP480-201ENST00000516840 109 ntBASIC0.5□□□□□ -2.33
ZKSCAN3Q9BRR0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.49□□□□□ -2.33
ZKSCAN3Q9BRR0 AP000676.1-201ENST00000533307 52 ntBASIC0.49□□□□□ -2.33
ZKSCAN3Q9BRR0 RN7SL793P-201ENST00000583259 296 ntBASIC0.48□□□□□ -2.33
ZKSCAN3Q9BRR0 MIR5087-201ENST00000635826 76 ntBASIC0.48□□□□□ -2.33
ZKSCAN3Q9BRR0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.47□□□□□ -2.33
ZKSCAN3Q9BRR0 Y_RNA.74-201ENST00000362911 99 ntBASIC0.47□□□□□ -2.33
ZKSCAN3Q9BRR0 Y_RNA.540-201ENST00000384638 111 ntBASIC0.47□□□□□ -2.33
ZKSCAN3Q9BRR0 MIR633-201ENST00000384821 98 ntBASIC0.47□□□□□ -2.33
ZKSCAN3Q9BRR0 RNU6-1246P-201ENST00000391064 107 ntBASIC0.47□□□□□ -2.33
ZKSCAN3Q9BRR0 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.47□□□□□ -2.33
ZKSCAN3Q9BRR0 MIR643-201ENST00000385267 97 ntBASIC0.46□□□□□ -2.34
ZKSCAN3Q9BRR0 RNU6-1079P-201ENST00000362861 110 ntBASIC0.45□□□□□ -2.34
ZKSCAN3Q9BRR0 MIR3938-201ENST00000582157 103 ntBASIC0.45□□□□□ -2.34
ZKSCAN3Q9BRR0 SNORD114-26-201ENST00000363543 72 ntBASIC0.44□□□□□ -2.34
ZKSCAN3Q9BRR0 MIR892B-201ENST00000401279 77 ntBASIC0.44□□□□□ -2.34
ZKSCAN3Q9BRR0 AC079150.2-201ENST00000443733 78 ntBASIC0.44□□□□□ -2.34
ZKSCAN3Q9BRR0 MIR6514-201ENST00000622549 70 ntBASIC0.44□□□□□ -2.34
ZKSCAN3Q9BRR0 SNORD114-23-201ENST00000363536 72 ntBASIC0.43□□□□□ -2.34
ZKSCAN3Q9BRR0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.43□□□□□ -2.34
ZKSCAN3Q9BRR0 MIR4315-1-201ENST00000636800 73 ntBASIC0.43□□□□□ -2.34
ZKSCAN3Q9BRR0 MIR4315-2-201ENST00000640925 73 ntBASIC0.43□□□□□ -2.34
ZKSCAN3Q9BRR0 MIR527-201ENST00000385244 85 ntBASIC0.42□□□□□ -2.34
ZKSCAN3Q9BRR0 CR383656.4-201ENST00000546909 122 ntBASIC0.42□□□□□ -2.34
ZKSCAN3Q9BRR0 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.42□□□□□ -2.34
ZKSCAN3Q9BRR0 SNORA41B-201ENST00000384785 128 ntBASIC0.41□□□□□ -2.34
ZKSCAN3Q9BRR0 MTND4LP19-201ENST00000403051 166 ntBASIC0.41□□□□□ -2.34
ZKSCAN3Q9BRR0 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.41□□□□□ -2.34
ZKSCAN3Q9BRR0 MIR148A-201ENST00000362215 68 ntBASIC0.4□□□□□ -2.35
ZKSCAN3Q9BRR0 SNORD115-23-201ENST00000364461 82 ntBASIC0.4□□□□□ -2.35
ZKSCAN3Q9BRR0 SNORD116-16-201ENST00000384533 92 ntBASIC0.4□□□□□ -2.35
ZKSCAN3Q9BRR0 snoR1.1-201ENST00000628177 80 ntBASIC0.4□□□□□ -2.35
ZKSCAN3Q9BRR0 RNA5SP325-201ENST00000363756 130 ntBASIC0.39□□□□□ -2.35
ZKSCAN3Q9BRR0 Y_RNA.282-201ENST00000364793 102 ntBASIC0.39□□□□□ -2.35
ZKSCAN3Q9BRR0 MIR610-201ENST00000385139 96 ntBASIC0.39□□□□□ -2.35
ZKSCAN3Q9BRR0 RNA5SP163-201ENST00000410304 99 ntBASIC0.39□□□□□ -2.35
ZKSCAN3Q9BRR0 AL353803.5-201ENST00000599815 141 ntBASIC0.39□□□□□ -2.35
ZKSCAN3Q9BRR0 RNU6-829P-201ENST00000363700 112 ntBASIC0.38□□□□□ -2.35
ZKSCAN3Q9BRR0 VTRNA1-3-201ENST00000365645 89 ntBASIC0.38□□□□□ -2.35
ZKSCAN3Q9BRR0 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
ZKSCAN3Q9BRR0 MIR193B-201ENST00000384907 83 ntBASIC0.38□□□□□ -2.35
ZKSCAN3Q9BRR0 MIR548H2-201ENST00000408874 88 ntBASIC0.38□□□□□ -2.35
ZKSCAN3Q9BRR0 RNU6-180P-201ENST00000516697 61 ntBASIC0.38□□□□□ -2.35
ZKSCAN3Q9BRR0 MIR4743-201ENST00000584576 69 ntBASIC0.38□□□□□ -2.35
ZKSCAN3Q9BRR0 MIR6779-201ENST00000617283 64 ntBASIC0.38□□□□□ -2.35
ZKSCAN3Q9BRR0 MIR429-201ENST00000362106 83 ntBASIC0.37□□□□□ -2.35
ZKSCAN3Q9BRR0 AC010487.4-201ENST00000637027 61 ntBASIC0.37□□□□□ -2.35
ZKSCAN3Q9BRR0 MIR4432-201ENST00000581823 84 ntBASIC0.36□□□□□ -2.35
ZKSCAN3Q9BRR0 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
ZKSCAN3Q9BRR0 RNU7-55P-201ENST00000459426 62 ntBASIC0.34□□□□□ -2.36
ZKSCAN3Q9BRR0 MIR1273G-201ENST00000577677 100 ntBASIC0.34□□□□□ -2.36
ZKSCAN3Q9BRR0 SNORA42.1-201ENST00000363515 137 ntBASIC0.33□□□□□ -2.36
ZKSCAN3Q9BRR0 RNU6-900P-201ENST00000384498 102 ntBASIC0.33□□□□□ -2.36
ZKSCAN3Q9BRR0 RNU6-1133P-201ENST00000410963 100 ntBASIC0.33□□□□□ -2.36
ZKSCAN3Q9BRR0 MIR548AG1-201ENST00000579932 66 ntBASIC0.33□□□□□ -2.36
ZKSCAN3Q9BRR0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 214.4 ms