Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.43□□□□□ -2.34
CHAMP1Q96JM3 SNORD45A-201ENST00000384512 84 ntBASIC0.43□□□□□ -2.34
CHAMP1Q96JM3 MIR154-201ENST00000385243 84 ntBASIC0.43□□□□□ -2.34
CHAMP1Q96JM3 RNU6-127P-201ENST00000390897 107 ntBASIC0.43□□□□□ -2.34
CHAMP1Q96JM3 RNA5SP299-201ENST00000391203 116 ntBASIC0.43□□□□□ -2.34
CHAMP1Q96JM3 AC073261.1-201ENST00000429409 121 ntBASIC0.43□□□□□ -2.34
CHAMP1Q96JM3 RNU7-129P-201ENST00000516128 62 ntBASIC0.43□□□□□ -2.34
CHAMP1Q96JM3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.43□□□□□ -2.34
CHAMP1Q96JM3 SNORA63.6-201ENST00000364921 119 ntBASIC0.42□□□□□ -2.34
CHAMP1Q96JM3 RN7SL660P-201ENST00000614852 299 ntBASIC0.42□□□□□ -2.34
CHAMP1Q96JM3 AC084368.1-201ENST00000620935 65 ntBASIC0.42□□□□□ -2.34
CHAMP1Q96JM3 SNORD114-15-201ENST00000364687 72 ntBASIC0.41□□□□□ -2.34
CHAMP1Q96JM3 RNU6-782P-201ENST00000516852 104 ntBASIC0.41□□□□□ -2.34
CHAMP1Q96JM3 SNORD113.1-201ENST00000363280 73 ntBASIC0.4□□□□□ -2.35
CHAMP1Q96JM3 RNU6-540P-201ENST00000384622 101 ntBASIC0.4□□□□□ -2.35
CHAMP1Q96JM3 SNORA49-201ENST00000386157 136 ntBASIC0.4□□□□□ -2.35
CHAMP1Q96JM3 RNA5SP266-201ENST00000410273 108 ntBASIC0.4□□□□□ -2.35
CHAMP1Q96JM3 AC021146.9-201ENST00000512503 156 ntBASIC0.4□□□□□ -2.35
CHAMP1Q96JM3 RNU6-982P-201ENST00000516216 102 ntBASIC0.4□□□□□ -2.35
CHAMP1Q96JM3 MIR548H2-201ENST00000408874 88 ntBASIC0.39□□□□□ -2.35
CHAMP1Q96JM3 RNU6-656P-201ENST00000516785 107 ntBASIC0.39□□□□□ -2.35
CHAMP1Q96JM3 MIR521-2-201ENST00000384818 87 ntBASIC0.38□□□□□ -2.35
CHAMP1Q96JM3 SCARNA11.2-201ENST00000517183 154 ntBASIC0.38□□□□□ -2.35
CHAMP1Q96JM3 RNU6-881P-201ENST00000516813 102 ntBASIC0.37□□□□□ -2.35
CHAMP1Q96JM3 RNU6-645P-201ENST00000364649 106 ntBASIC0.36□□□□□ -2.35
CHAMP1Q96JM3 SNORD116-24-201ENST00000384549 92 ntBASIC0.36□□□□□ -2.35
CHAMP1Q96JM3 MIR5190-201ENST00000581537 80 ntBASIC0.36□□□□□ -2.35
CHAMP1Q96JM3 Y_RNA.457-201ENST00000384237 111 ntBASIC0.35□□□□□ -2.35
CHAMP1Q96JM3 SNORA75.1-201ENST00000391130 148 ntBASIC0.35□□□□□ -2.35
CHAMP1Q96JM3 RNU6-871P-201ENST00000516122 100 ntBASIC0.35□□□□□ -2.35
CHAMP1Q96JM3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.35□□□□□ -2.35
CHAMP1Q96JM3 MIR4315-1-201ENST00000636800 73 ntBASIC0.35□□□□□ -2.35
CHAMP1Q96JM3 MIR4315-2-201ENST00000640925 73 ntBASIC0.35□□□□□ -2.35
CHAMP1Q96JM3 SNORD114-31-201ENST00000363219 75 ntBASIC0.34□□□□□ -2.36
CHAMP1Q96JM3 SNORA15B-2-201ENST00000384058 135 ntBASIC0.34□□□□□ -2.36
CHAMP1Q96JM3 SNORA15B-1-201ENST00000384334 135 ntBASIC0.34□□□□□ -2.36
CHAMP1Q96JM3 MIR106A-201ENST00000384870 81 ntBASIC0.34□□□□□ -2.36
CHAMP1Q96JM3 SNORA33.1-201ENST00000364957 130 ntBASIC0.33□□□□□ -2.36
CHAMP1Q96JM3 MIR643-201ENST00000385267 97 ntBASIC0.33□□□□□ -2.36
CHAMP1Q96JM3 RNU6-1036P-201ENST00000383959 104 ntBASIC0.32□□□□□ -2.36
CHAMP1Q96JM3 RNU6-1162P-201ENST00000384443 104 ntBASIC0.32□□□□□ -2.36
CHAMP1Q96JM3 MIR1468-201ENST00000410600 86 ntBASIC0.32□□□□□ -2.36
CHAMP1Q96JM3 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
CHAMP1Q96JM3 MIR4493-201ENST00000584016 73 ntBASIC0.32□□□□□ -2.36
CHAMP1Q96JM3 MIR6718-201ENST00000616153 80 ntBASIC0.32□□□□□ -2.36
CHAMP1Q96JM3 RNU6-1216P-201ENST00000362590 107 ntBASIC0.31□□□□□ -2.36
CHAMP1Q96JM3 SNORD2-201ENST00000459163 69 ntBASIC0.31□□□□□ -2.36
CHAMP1Q96JM3 MIR604-201ENST00000384880 94 ntBASIC0.3□□□□□ -2.36
CHAMP1Q96JM3 AP001180.6-201ENST00000584918 159 ntBASIC0.3□□□□□ -2.36
CHAMP1Q96JM3 MIR4723-201ENST00000585070 81 ntBASIC0.3□□□□□ -2.36
CHAMP1Q96JM3 AC090617.8-201ENST00000623339 167 ntBASIC0.3□□□□□ -2.36
CHAMP1Q96JM3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.29□□□□□ -2.36
CHAMP1Q96JM3 RNU6-895P-201ENST00000384125 103 ntBASIC0.29□□□□□ -2.36
CHAMP1Q96JM3 RNU6-663P-201ENST00000391105 106 ntBASIC0.29□□□□□ -2.36
CHAMP1Q96JM3 RNU6-337P-201ENST00000391243 106 ntBASIC0.29□□□□□ -2.36
CHAMP1Q96JM3 AC114801.3-201ENST00000510231 177 ntBASIC0.29□□□□□ -2.36
CHAMP1Q96JM3 RNU6-180P-201ENST00000516697 61 ntBASIC0.28□□□□□ -2.36
CHAMP1Q96JM3 AC108676.2-201ENST00000605225 163 ntBASIC0.28□□□□□ -2.36
CHAMP1Q96JM3 SNORA42.1-201ENST00000363515 137 ntBASIC0.27□□□□□ -2.37
CHAMP1Q96JM3 MIR5093-201ENST00000583199 100 ntBASIC0.27□□□□□ -2.37
CHAMP1Q96JM3 RNU6-502P-201ENST00000362419 108 ntBASIC0.26□□□□□ -2.37
CHAMP1Q96JM3 MTND4LP1-201ENST00000446263 157 ntBASIC0.26□□□□□ -2.37
CHAMP1Q96JM3 SNORD57-201ENST00000448188 72 ntBASIC0.26□□□□□ -2.37
CHAMP1Q96JM3 MIR6773-201ENST00000612812 74 ntBASIC0.26□□□□□ -2.37
CHAMP1Q96JM3 U6.96-201ENST00000636425 70 ntBASIC0.26□□□□□ -2.37
CHAMP1Q96JM3 SNORD30.1-201ENST00000391309 70 ntBASIC0.25□□□□□ -2.37
CHAMP1Q96JM3 RNU6-539P-201ENST00000516665 103 ntBASIC0.25□□□□□ -2.37
CHAMP1Q96JM3 AC104408.1-201ENST00000605241 170 ntBASIC0.25□□□□□ -2.37
CHAMP1Q96JM3 MIR371B-201ENST00000638082 66 ntBASIC0.25□□□□□ -2.37
CHAMP1Q96JM3 RNU6-649P-201ENST00000384463 107 ntBASIC0.24□□□□□ -2.37
CHAMP1Q96JM3 MIR4743-201ENST00000584576 69 ntBASIC0.24□□□□□ -2.37
CHAMP1Q96JM3 SNORD115-25-201ENST00000362619 82 ntBASIC0.23□□□□□ -2.37
CHAMP1Q96JM3 RNA5SP214-201ENST00000363378 118 ntBASIC0.23□□□□□ -2.37
CHAMP1Q96JM3 RNU6-668P-201ENST00000364180 107 ntBASIC0.23□□□□□ -2.37
CHAMP1Q96JM3 SNORD114-9-201ENST00000364370 72 ntBASIC0.23□□□□□ -2.37
CHAMP1Q96JM3 RNU6-1089P-201ENST00000516473 104 ntBASIC0.23□□□□□ -2.37
CHAMP1Q96JM3 CR383656.4-201ENST00000546909 122 ntBASIC0.23□□□□□ -2.37
CHAMP1Q96JM3 CYP3A54P-201ENST00000566950 75 ntBASIC0.23□□□□□ -2.37
CHAMP1Q96JM3 MIR4768-201ENST00000585270 74 ntBASIC0.23□□□□□ -2.37
CHAMP1Q96JM3 U2.7-201ENST00000619197 100 ntBASIC0.23□□□□□ -2.37
CHAMP1Q96JM3 MIR6514-201ENST00000622549 70 ntBASIC0.23□□□□□ -2.37
CHAMP1Q96JM3 U6.111-201ENST00000636093 83 ntBASIC0.23□□□□□ -2.37
CHAMP1Q96JM3 RNU6-302P-201ENST00000365249 107 ntBASIC0.22□□□□□ -2.37
CHAMP1Q96JM3 MIR892B-201ENST00000401279 77 ntBASIC0.22□□□□□ -2.37
CHAMP1Q96JM3 RNA5SP163-201ENST00000410304 99 ntBASIC0.22□□□□□ -2.37
CHAMP1Q96JM3 AC139453.2-201ENST00000487255 133 ntBASIC0.22□□□□□ -2.37
CHAMP1Q96JM3 Y_RNA.386-201ENST00000383913 105 ntBASIC0.21□□□□□ -2.38
CHAMP1Q96JM3 Y_RNA.443-201ENST00000384135 111 ntBASIC0.21□□□□□ -2.38
CHAMP1Q96JM3 MIR593-201ENST00000384856 100 ntBASIC0.21□□□□□ -2.38
CHAMP1Q96JM3 MIR610-201ENST00000385139 96 ntBASIC0.21□□□□□ -2.38
CHAMP1Q96JM3 RNU6-46P-201ENST00000383860 107 ntBASIC0.2□□□□□ -2.38
CHAMP1Q96JM3 MIR145-201ENST00000384967 88 ntBASIC0.2□□□□□ -2.38
CHAMP1Q96JM3 MIRLET7B-201ENST00000385140 83 ntBASIC0.2□□□□□ -2.38
CHAMP1Q96JM3 RNU6-630P-201ENST00000391258 106 ntBASIC0.2□□□□□ -2.38
CHAMP1Q96JM3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.2□□□□□ -2.38
CHAMP1Q96JM3 AC005520.4-201ENST00000604337 90 ntBASIC0.2□□□□□ -2.38
CHAMP1Q96JM3 SNORD95.1-201ENST00000364099 68 ntBASIC0.19□□□□□ -2.38
CHAMP1Q96JM3 Y_RNA.375-201ENST00000365625 101 ntBASIC0.19□□□□□ -2.38
CHAMP1Q96JM3 RNU7-165P-201ENST00000458864 60 ntBASIC0.19□□□□□ -2.38
CHAMP1Q96JM3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms