Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RNA5SP470-201ENST00000516463 106 ntBASIC1.49□□□□□ -2.17
LRCH3Q96II8 MIR1273G-201ENST00000577677 100 ntBASIC1.49□□□□□ -2.17
LRCH3Q96II8 MIR5706-201ENST00000579841 80 ntBASIC1.49□□□□□ -2.17
LRCH3Q96II8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
LRCH3Q96II8 SNORD114-29-201ENST00000364819 70 ntBASIC1.48□□□□□ -2.17
LRCH3Q96II8 MIRLET7B-201ENST00000385140 83 ntBASIC1.48□□□□□ -2.17
LRCH3Q96II8 RNA5SP222-201ENST00000411039 105 ntBASIC1.46□□□□□ -2.18
LRCH3Q96II8 RNU7-188P-201ENST00000517063 64 ntBASIC1.46□□□□□ -2.18
LRCH3Q96II8 RNU6-598P-201ENST00000364017 105 ntBASIC1.45□□□□□ -2.18
LRCH3Q96II8 SNORD26-201ENST00000384147 75 ntBASIC1.45□□□□□ -2.18
LRCH3Q96II8 MIR618-201ENST00000385287 98 ntBASIC1.45□□□□□ -2.18
LRCH3Q96II8 AC069271.1-201ENST00000445577 156 ntBASIC1.45□□□□□ -2.18
LRCH3Q96II8 RNU6-1206P-201ENST00000516339 103 ntBASIC1.45□□□□□ -2.18
LRCH3Q96II8 U2.18-201ENST00000622185 84 ntBASIC1.45□□□□□ -2.18
LRCH3Q96II8 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.45□□□□□ -2.18
LRCH3Q96II8 Y_RNA.69-201ENST00000362885 109 ntBASIC1.44□□□□□ -2.18
LRCH3Q96II8 RNU7-160P-201ENST00000516660 62 ntBASIC1.44□□□□□ -2.18
LRCH3Q96II8 RNU7-151P-201ENST00000516930 53 ntBASIC1.44□□□□□ -2.18
LRCH3Q96II8 RNA5SP404-201ENST00000517118 132 ntBASIC1.44□□□□□ -2.18
LRCH3Q96II8 MIR3660-201ENST00000584845 100 ntBASIC1.44□□□□□ -2.18
LRCH3Q96II8 RNU6-986P-201ENST00000363133 102 ntBASIC1.43□□□□□ -2.18
LRCH3Q96II8 RNA5SP62-201ENST00000363457 110 ntBASIC1.43□□□□□ -2.18
LRCH3Q96II8 RNU1-124P-201ENST00000363861 145 ntBASIC1.43□□□□□ -2.18
LRCH3Q96II8 RNU6-175P-201ENST00000516896 107 ntBASIC1.43□□□□□ -2.18
LRCH3Q96II8 RNU6-502P-201ENST00000362419 108 ntBASIC1.42□□□□□ -2.18
LRCH3Q96II8 RNU6-1250P-201ENST00000391218 107 ntBASIC1.42□□□□□ -2.18
LRCH3Q96II8 RNU6-782P-201ENST00000516852 104 ntBASIC1.42□□□□□ -2.18
LRCH3Q96II8 AL590095.2-201ENST00000604136 117 ntBASIC1.42□□□□□ -2.18
LRCH3Q96II8 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.42□□□□□ -2.18
LRCH3Q96II8 RNA5SP517-201ENST00000364724 117 ntBASIC1.41□□□□□ -2.18
LRCH3Q96II8 RNA5SP257-201ENST00000363023 116 ntBASIC1.4□□□□□ -2.19
LRCH3Q96II8 RNA5SP330-201ENST00000517096 96 ntBASIC1.4□□□□□ -2.19
LRCH3Q96II8 MIR26B-201ENST00000362251 77 ntBASIC1.39□□□□□ -2.19
LRCH3Q96II8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
LRCH3Q96II8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.38□□□□□ -2.19
LRCH3Q96II8 RNA5SP121-201ENST00000516537 101 ntBASIC1.38□□□□□ -2.19
LRCH3Q96II8 MIR548AL-201ENST00000578416 97 ntBASIC1.38□□□□□ -2.19
LRCH3Q96II8 SNORA25.18-201ENST00000607153 114 ntBASIC1.38□□□□□ -2.19
LRCH3Q96II8 MIR7974-201ENST00000615835 79 ntBASIC1.38□□□□□ -2.19
LRCH3Q96II8 RNU6-1036P-201ENST00000383959 104 ntBASIC1.37□□□□□ -2.19
LRCH3Q96II8 RNU6-955P-201ENST00000410497 104 ntBASIC1.37□□□□□ -2.19
LRCH3Q96II8 RNU6-1232P-201ENST00000516299 86 ntBASIC1.37□□□□□ -2.19
LRCH3Q96II8 AL353803.5-201ENST00000599815 141 ntBASIC1.37□□□□□ -2.19
LRCH3Q96II8 MIR329-2-201ENST00000385029 84 ntBASIC1.36□□□□□ -2.19
LRCH3Q96II8 RPS29P23-201ENST00000458635 123 ntBASIC1.36□□□□□ -2.19
LRCH3Q96II8 ACA64.5-201ENST00000516207 127 ntBASIC1.36□□□□□ -2.19
LRCH3Q96II8 U7.6-201ENST00000610841 64 ntBASIC1.36□□□□□ -2.19
LRCH3Q96II8 MIR373-201ENST00000362273 69 ntBASIC1.35□□□□□ -2.19
LRCH3Q96II8 SNORA2A-201ENST00000383885 135 ntBASIC1.35□□□□□ -2.19
LRCH3Q96II8 RNU6-724P-201ENST00000390958 105 ntBASIC1.35□□□□□ -2.19
LRCH3Q96II8 RNU6-229P-201ENST00000516614 102 ntBASIC1.35□□□□□ -2.19
LRCH3Q96II8 AL353765.1-201ENST00000605514 183 ntBASIC1.35□□□□□ -2.19
LRCH3Q96II8 SNORA36.2-201ENST00000384004 127 ntBASIC1.34□□□□□ -2.19
LRCH3Q96II8 AC068338.1-201ENST00000565567 176 ntBASIC1.34□□□□□ -2.19
LRCH3Q96II8 AC087343.1-201ENST00000477341 475 ntBASIC1.33□□□□□ -2.2
LRCH3Q96II8 MIR4677-201ENST00000584153 80 ntBASIC1.33□□□□□ -2.2
LRCH3Q96II8 MIR4295-201ENST00000585286 85 ntBASIC1.33□□□□□ -2.2
LRCH3Q96II8 RNU6-828P-201ENST00000364876 107 ntBASIC1.32□□□□□ -2.2
LRCH3Q96II8 Y_RNA.423-201ENST00000384057 113 ntBASIC1.32□□□□□ -2.2
LRCH3Q96II8 MIR125B1-201ENST00000385236 88 ntBASIC1.32□□□□□ -2.2
LRCH3Q96II8 AL451105.1-201ENST00000450005 189 ntBASIC1.32□□□□□ -2.2
LRCH3Q96II8 RNU6-1262P-201ENST00000516217 96 ntBASIC1.32□□□□□ -2.2
LRCH3Q96II8 AC211469.2-201ENST00000605461 205 ntBASIC1.32□□□□□ -2.2
LRCH3Q96II8 MIR924-201ENST00000638017 53 ntBASIC1.32□□□□□ -2.2
LRCH3Q96II8 SNORD118-201ENST00000363593 134 ntBASIC1.31□□□□□ -2.2
LRCH3Q96II8 MIR140-201ENST00000385282 100 ntBASIC1.31□□□□□ -2.2
LRCH3Q96II8 MIR501-201ENST00000390204 84 ntBASIC1.31□□□□□ -2.2
LRCH3Q96II8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
LRCH3Q96II8 RNU6-995P-201ENST00000391244 107 ntBASIC1.31□□□□□ -2.2
LRCH3Q96II8 CYP3A137P-201ENST00000562436 69 ntBASIC1.31□□□□□ -2.2
LRCH3Q96II8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
LRCH3Q96II8 MIR548AA1-201ENST00000384971 97 ntBASIC1.3□□□□□ -2.2
LRCH3Q96II8 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.3□□□□□ -2.2
LRCH3Q96II8 SNORD115-23-201ENST00000364461 82 ntBASIC1.29□□□□□ -2.2
LRCH3Q96II8 MIR4432-201ENST00000581823 84 ntBASIC1.29□□□□□ -2.2
LRCH3Q96II8 RN7SL660P-201ENST00000614852 299 ntBASIC1.29□□□□□ -2.2
LRCH3Q96II8 AC084368.1-201ENST00000620935 65 ntBASIC1.29□□□□□ -2.2
LRCH3Q96II8 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
LRCH3Q96II8 RNU6-696P-201ENST00000390834 107 ntBASIC1.28□□□□□ -2.2
LRCH3Q96II8 RNU6-1267P-201ENST00000410747 107 ntBASIC1.28□□□□□ -2.2
LRCH3Q96II8 AC108676.2-201ENST00000605225 163 ntBASIC1.28□□□□□ -2.2
LRCH3Q96II8 Y_RNA.698-201ENST00000516798 118 ntBASIC1.27□□□□□ -2.21
LRCH3Q96II8 SNORA40.8-201ENST00000411034 126 ntBASIC1.26□□□□□ -2.21
LRCH3Q96II8 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.26□□□□□ -2.21
LRCH3Q96II8 MIR6086-201ENST00000638065 55 ntBASIC1.26□□□□□ -2.21
LRCH3Q96II8 Y_RNA.139-201ENST00000363464 102 ntBASIC1.25□□□□□ -2.21
LRCH3Q96II8 MIR6755-201ENST00000619993 66 ntBASIC1.25□□□□□ -2.21
LRCH3Q96II8 RNU6-945P-201ENST00000383947 107 ntBASIC1.24□□□□□ -2.21
LRCH3Q96II8 MIR150-201ENST00000385048 84 ntBASIC1.24□□□□□ -2.21
LRCH3Q96II8 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.24□□□□□ -2.21
LRCH3Q96II8 RNU4-54P-201ENST00000516428 129 ntBASIC1.24□□□□□ -2.21
LRCH3Q96II8 MIR3973-201ENST00000579824 107 ntBASIC1.23□□□□□ -2.21
LRCH3Q96II8 MIR8087-201ENST00000612745 78 ntBASIC1.23□□□□□ -2.21
LRCH3Q96II8 SNORD114-23-201ENST00000363536 72 ntBASIC1.22□□□□□ -2.21
LRCH3Q96II8 RNU6-1204P-201ENST00000363948 107 ntBASIC1.22□□□□□ -2.21
LRCH3Q96II8 AC098934.3-201ENST00000430450 190 ntBASIC1.22□□□□□ -2.21
LRCH3Q96II8 U7.5-201ENST00000517224 61 ntBASIC1.22□□□□□ -2.21
LRCH3Q96II8 AP000676.1-201ENST00000533307 52 ntBASIC1.22□□□□□ -2.21
LRCH3Q96II8 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
LRCH3Q96II8 MIR760-201ENST00000390220 80 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 240.3 ms