Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 RNU6-945P-201ENST00000383947 107 ntBASIC1.2□□□□□ -2.22
HPS1Q92902 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
HPS1Q92902 SNORD45.2-201ENST00000363552 72 ntBASIC1.19□□□□□ -2.22
HPS1Q92902 SNORD118-201ENST00000363593 134 ntBASIC1.19□□□□□ -2.22
HPS1Q92902 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
HPS1Q92902 RNU6-939P-201ENST00000384634 107 ntBASIC1.19□□□□□ -2.22
HPS1Q92902 RNU6-848P-201ENST00000515948 107 ntBASIC1.19□□□□□ -2.22
HPS1Q92902 RNU6-617P-201ENST00000516147 107 ntBASIC1.19□□□□□ -2.22
HPS1Q92902 RNU6-473P-201ENST00000516164 107 ntBASIC1.19□□□□□ -2.22
HPS1Q92902 RNU6-1049P-201ENST00000516414 107 ntBASIC1.19□□□□□ -2.22
HPS1Q92902 AC108676.2-201ENST00000605225 163 ntBASIC1.19□□□□□ -2.22
HPS1Q92902 RNU6-1267P-201ENST00000410747 107 ntBASIC1.17□□□□□ -2.22
HPS1Q92902 RNU6-1232P-201ENST00000516299 86 ntBASIC1.17□□□□□ -2.22
HPS1Q92902 SNORA25.18-201ENST00000607153 114 ntBASIC1.17□□□□□ -2.22
HPS1Q92902 MIR6078-201ENST00000611069 100 ntBASIC1.17□□□□□ -2.22
HPS1Q92902 AC084368.1-201ENST00000620935 65 ntBASIC1.17□□□□□ -2.22
HPS1Q92902 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
HPS1Q92902 MIR140-201ENST00000385282 100 ntBASIC1.16□□□□□ -2.22
HPS1Q92902 MIR501-201ENST00000390204 84 ntBASIC1.16□□□□□ -2.22
HPS1Q92902 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
HPS1Q92902 Y_RNA.698-201ENST00000516798 118 ntBASIC1.16□□□□□ -2.22
HPS1Q92902 RNU6-822P-201ENST00000362707 106 ntBASIC1.15□□□□□ -2.23
HPS1Q92902 Y_RNA.139-201ENST00000363464 102 ntBASIC1.15□□□□□ -2.23
HPS1Q92902 SNORD57-201ENST00000448188 72 ntBASIC1.15□□□□□ -2.23
HPS1Q92902 OR2A41P-201ENST00000473586 105 ntBASIC1.15□□□□□ -2.23
HPS1Q92902 ACA64.5-201ENST00000516207 127 ntBASIC1.15□□□□□ -2.23
HPS1Q92902 MIR4432-201ENST00000581823 84 ntBASIC1.15□□□□□ -2.23
HPS1Q92902 MIR6504-201ENST00000613520 61 ntBASIC1.15□□□□□ -2.23
HPS1Q92902 RN7SL660P-201ENST00000614852 299 ntBASIC1.15□□□□□ -2.23
HPS1Q92902 U6.103-201ENST00000637085 61 ntBASIC1.15□□□□□ -2.23
HPS1Q92902 RNU6-742P-201ENST00000365289 107 ntBASIC1.14□□□□□ -2.23
HPS1Q92902 SNORA36.2-201ENST00000384004 127 ntBASIC1.14□□□□□ -2.23
HPS1Q92902 Y_RNA.423-201ENST00000384057 113 ntBASIC1.14□□□□□ -2.23
HPS1Q92902 SNORA40.8-201ENST00000411034 126 ntBASIC1.14□□□□□ -2.23
HPS1Q92902 MIR1276-201ENST00000408707 83 ntBASIC1.13□□□□□ -2.23
HPS1Q92902 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.13□□□□□ -2.23
HPS1Q92902 RNU6-721P-201ENST00000410155 105 ntBASIC1.12□□□□□ -2.23
HPS1Q92902 U7.5-201ENST00000517224 61 ntBASIC1.11□□□□□ -2.23
HPS1Q92902 MIR3660-201ENST00000584845 100 ntBASIC1.11□□□□□ -2.23
HPS1Q92902 MIR106A-201ENST00000384870 81 ntBASIC1.1□□□□□ -2.23
HPS1Q92902 MIR29B1-201ENST00000385015 81 ntBASIC1.1□□□□□ -2.23
HPS1Q92902 MIR876-201ENST00000401147 81 ntBASIC1.1□□□□□ -2.23
HPS1Q92902 MIR6755-201ENST00000619993 66 ntBASIC1.1□□□□□ -2.23
HPS1Q92902 SNORD71-201ENST00000411292 86 ntBASIC1.09□□□□□ -2.23
HPS1Q92902 RNU6-974P-201ENST00000384099 108 ntBASIC1.08□□□□□ -2.24
HPS1Q92902 SNORD63.1-201ENST00000516178 80 ntBASIC1.08□□□□□ -2.24
HPS1Q92902 RNA5SP102-201ENST00000516865 106 ntBASIC1.08□□□□□ -2.24
HPS1Q92902 RNU6-1174P-201ENST00000517278 101 ntBASIC1.08□□□□□ -2.24
HPS1Q92902 MTRNR2L9-201ENST00000622562 75 ntBASIC1.08□□□□□ -2.24
HPS1Q92902 snoR1.1-201ENST00000628177 80 ntBASIC1.08□□□□□ -2.24
HPS1Q92902 MIR518A1-201ENST00000385068 85 ntBASIC1.07□□□□□ -2.24
HPS1Q92902 AP000676.1-201ENST00000533307 52 ntBASIC1.07□□□□□ -2.24
HPS1Q92902 MIR3925-201ENST00000584674 77 ntBASIC1.07□□□□□ -2.24
HPS1Q92902 Y_RNA.355-201ENST00000365462 98 ntBASIC1.06□□□□□ -2.24
HPS1Q92902 MIR760-201ENST00000390220 80 ntBASIC1.06□□□□□ -2.24
HPS1Q92902 MIR4464-201ENST00000580818 92 ntBASIC1.06□□□□□ -2.24
HPS1Q92902 MIR4661-201ENST00000582720 75 ntBASIC1.06□□□□□ -2.24
HPS1Q92902 MIR6888-201ENST00000621977 67 ntBASIC1.06□□□□□ -2.24
HPS1Q92902 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
HPS1Q92902 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
HPS1Q92902 RNU6-59P-201ENST00000384787 107 ntBASIC1.05□□□□□ -2.24
HPS1Q92902 MIR548H4-201ENST00000408689 111 ntBASIC1.05□□□□□ -2.24
HPS1Q92902 RNU7-88P-201ENST00000458752 63 ntBASIC1.05□□□□□ -2.24
HPS1Q92902 MIR4452-201ENST00000583004 71 ntBASIC1.05□□□□□ -2.24
HPS1Q92902 RNA5SP128-201ENST00000365305 116 ntBASIC1.04□□□□□ -2.24
HPS1Q92902 SNORA62.4-201ENST00000365504 151 ntBASIC1.04□□□□□ -2.24
HPS1Q92902 snoU13.18-201ENST00000459483 104 ntBASIC1.04□□□□□ -2.24
HPS1Q92902 RNU4-54P-201ENST00000516428 129 ntBASIC1.04□□□□□ -2.24
HPS1Q92902 AL445584.3-201ENST00000617173 78 ntBASIC1.04□□□□□ -2.24
HPS1Q92902 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.24
HPS1Q92902 Y_RNA.118-201ENST00000363300 101 ntBASIC1.02□□□□□ -2.25
HPS1Q92902 Y_RNA.321-201ENST00000365149 102 ntBASIC1.02□□□□□ -2.25
HPS1Q92902 AC098934.3-201ENST00000430450 190 ntBASIC1.02□□□□□ -2.25
HPS1Q92902 SNORD63.2-201ENST00000516303 64 ntBASIC1.02□□□□□ -2.25
HPS1Q92902 MIR3170-201ENST00000582699 77 ntBASIC1.02□□□□□ -2.25
HPS1Q92902 AC104408.1-201ENST00000605241 170 ntBASIC1.02□□□□□ -2.25
HPS1Q92902 AL590095.2-201ENST00000604136 117 ntBASIC1.01□□□□□ -2.25
HPS1Q92902 MIR7111-201ENST00000619751 72 ntBASIC1.01□□□□□ -2.25
HPS1Q92902 MIR608-201ENST00000384820 100 ntBASIC1□□□□□ -2.25
HPS1Q92902 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
HPS1Q92902 SNORD114-22-201ENST00000365423 72 ntBASIC0.99□□□□□ -2.25
HPS1Q92902 RNU6-42P-201ENST00000384165 107 ntBASIC0.99□□□□□ -2.25
HPS1Q92902 Y_RNA.613-201ENST00000410726 97 ntBASIC0.99□□□□□ -2.25
HPS1Q92902 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.99□□□□□ -2.25
HPS1Q92902 RNA5SP220-201ENST00000516298 104 ntBASIC0.99□□□□□ -2.25
HPS1Q92902 RNA5SP98-201ENST00000363158 137 ntBASIC0.98□□□□□ -2.25
HPS1Q92902 RNU6-1008P-201ENST00000384160 104 ntBASIC0.98□□□□□ -2.25
HPS1Q92902 RNU6-530P-201ENST00000391180 107 ntBASIC0.98□□□□□ -2.25
HPS1Q92902 RNU7-55P-201ENST00000459426 62 ntBASIC0.98□□□□□ -2.25
HPS1Q92902 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
HPS1Q92902 RNU6-863P-201ENST00000515989 104 ntBASIC0.98□□□□□ -2.25
HPS1Q92902 SCARNA11.2-201ENST00000517183 154 ntBASIC0.98□□□□□ -2.25
HPS1Q92902 AL391099.1-201ENST00000624635 187 ntBASIC0.98□□□□□ -2.25
HPS1Q92902 RNU6-1223P-201ENST00000517124 104 ntBASIC0.97□□□□□ -2.25
HPS1Q92902 MIR499B-201ENST00000636498 73 ntBASIC0.97□□□□□ -2.25
HPS1Q92902 RNU1-93P-201ENST00000364704 169 ntBASIC0.96□□□□□ -2.26
HPS1Q92902 RNU6-110P-201ENST00000384508 104 ntBASIC0.96□□□□□ -2.26
HPS1Q92902 RNU6-973P-201ENST00000364690 107 ntBASIC0.95□□□□□ -2.26
HPS1Q92902 RNU6-1111P-201ENST00000391118 107 ntBASIC0.95□□□□□ -2.26
HPS1Q92902 RNU6-1133P-201ENST00000410963 100 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms