Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.98□□□□□ -2.25
TMEM40Q8WWA1 SNORD115-25-201ENST00000362619 82 ntBASIC0.97□□□□□ -2.25
TMEM40Q8WWA1 RNA5SP517-201ENST00000364724 117 ntBASIC0.97□□□□□ -2.25
TMEM40Q8WWA1 RNU6-246P-201ENST00000384702 107 ntBASIC0.97□□□□□ -2.25
TMEM40Q8WWA1 MIR140-201ENST00000385282 100 ntBASIC0.97□□□□□ -2.25
TMEM40Q8WWA1 SNORA49-201ENST00000386157 136 ntBASIC0.97□□□□□ -2.25
TMEM40Q8WWA1 MIR5000-201ENST00000577717 103 ntBASIC0.97□□□□□ -2.25
TMEM40Q8WWA1 MIR4490-201ENST00000582647 84 ntBASIC0.97□□□□□ -2.25
TMEM40Q8WWA1 MIR6773-201ENST00000612812 74 ntBASIC0.97□□□□□ -2.25
TMEM40Q8WWA1 MIR548F3-201ENST00000408509 87 ntBASIC0.96□□□□□ -2.26
TMEM40Q8WWA1 RNU7-188P-201ENST00000517063 64 ntBASIC0.96□□□□□ -2.26
TMEM40Q8WWA1 SNORA25.18-201ENST00000607153 114 ntBASIC0.96□□□□□ -2.26
TMEM40Q8WWA1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.96□□□□□ -2.26
TMEM40Q8WWA1 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
TMEM40Q8WWA1 RNU6-110P-201ENST00000384508 104 ntBASIC0.94□□□□□ -2.26
TMEM40Q8WWA1 MIR579-201ENST00000385221 98 ntBASIC0.94□□□□□ -2.26
TMEM40Q8WWA1 PSMC1P5-201ENST00000512850 177 ntBASIC0.94□□□□□ -2.26
TMEM40Q8WWA1 RNU6-175P-201ENST00000516896 107 ntBASIC0.94□□□□□ -2.26
TMEM40Q8WWA1 MIR5706-201ENST00000579841 80 ntBASIC0.94□□□□□ -2.26
TMEM40Q8WWA1 SNORD114-29-201ENST00000364819 70 ntBASIC0.92□□□□□ -2.26
TMEM40Q8WWA1 Y_RNA.423-201ENST00000384057 113 ntBASIC0.92□□□□□ -2.26
TMEM40Q8WWA1 RNU6-458P-201ENST00000384179 107 ntBASIC0.92□□□□□ -2.26
TMEM40Q8WWA1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.92□□□□□ -2.26
TMEM40Q8WWA1 AC103810.9-201ENST00000606688 112 ntBASIC0.92□□□□□ -2.26
TMEM40Q8WWA1 U6.58-201ENST00000613107 107 ntBASIC0.92□□□□□ -2.26
TMEM40Q8WWA1 RNU6-1036P-201ENST00000383959 104 ntBASIC0.91□□□□□ -2.26
TMEM40Q8WWA1 MIR545-201ENST00000385085 106 ntBASIC0.91□□□□□ -2.26
TMEM40Q8WWA1 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
TMEM40Q8WWA1 RNU7-154P-201ENST00000516194 62 ntBASIC0.91□□□□□ -2.26
TMEM40Q8WWA1 RNU6-229P-201ENST00000516614 102 ntBASIC0.91□□□□□ -2.26
TMEM40Q8WWA1 RNU6-782P-201ENST00000516852 104 ntBASIC0.91□□□□□ -2.26
TMEM40Q8WWA1 RNU6-502P-201ENST00000362419 108 ntBASIC0.9□□□□□ -2.27
TMEM40Q8WWA1 RNU6-598P-201ENST00000364017 105 ntBASIC0.9□□□□□ -2.27
TMEM40Q8WWA1 MIRLET7B-201ENST00000385140 83 ntBASIC0.9□□□□□ -2.27
TMEM40Q8WWA1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.9□□□□□ -2.27
TMEM40Q8WWA1 RNU4-54P-201ENST00000516428 129 ntBASIC0.9□□□□□ -2.27
TMEM40Q8WWA1 MIR4714-201ENST00000580728 77 ntBASIC0.9□□□□□ -2.27
TMEM40Q8WWA1 SNORA2A-201ENST00000383885 135 ntBASIC0.89□□□□□ -2.27
TMEM40Q8WWA1 U2.18-201ENST00000622185 84 ntBASIC0.89□□□□□ -2.27
TMEM40Q8WWA1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
TMEM40Q8WWA1 RNU6-924P-201ENST00000362926 108 ntBASIC0.88□□□□□ -2.27
TMEM40Q8WWA1 MIR598-201ENST00000384868 97 ntBASIC0.88□□□□□ -2.27
TMEM40Q8WWA1 RNA5SP470-201ENST00000516463 106 ntBASIC0.88□□□□□ -2.27
TMEM40Q8WWA1 RNU6-419P-201ENST00000517030 63 ntBASIC0.88□□□□□ -2.27
TMEM40Q8WWA1 RNU6-838P-201ENST00000363399 108 ntBASIC0.87□□□□□ -2.27
TMEM40Q8WWA1 SNORD118-201ENST00000363593 134 ntBASIC0.87□□□□□ -2.27
TMEM40Q8WWA1 SNORD71-201ENST00000411292 86 ntBASIC0.87□□□□□ -2.27
TMEM40Q8WWA1 MIR4653-201ENST00000585107 83 ntBASIC0.87□□□□□ -2.27
TMEM40Q8WWA1 AL590095.2-201ENST00000604136 117 ntBASIC0.87□□□□□ -2.27
TMEM40Q8WWA1 RN7SL660P-201ENST00000614852 299 ntBASIC0.87□□□□□ -2.27
TMEM40Q8WWA1 SNORD2-201ENST00000459163 69 ntBASIC0.86□□□□□ -2.27
TMEM40Q8WWA1 RNU7-151P-201ENST00000516930 53 ntBASIC0.86□□□□□ -2.27
TMEM40Q8WWA1 MIR4677-201ENST00000584153 80 ntBASIC0.86□□□□□ -2.27
TMEM40Q8WWA1 MIR501-201ENST00000390204 84 ntBASIC0.85□□□□□ -2.27
TMEM40Q8WWA1 SNORA40.8-201ENST00000411034 126 ntBASIC0.85□□□□□ -2.27
TMEM40Q8WWA1 RNU6-351P-201ENST00000516097 100 ntBASIC0.85□□□□□ -2.27
TMEM40Q8WWA1 RNA5SP480-201ENST00000516840 109 ntBASIC0.85□□□□□ -2.27
TMEM40Q8WWA1 MIR6755-201ENST00000619993 66 ntBASIC0.85□□□□□ -2.27
TMEM40Q8WWA1 AC084368.1-201ENST00000620935 65 ntBASIC0.85□□□□□ -2.27
TMEM40Q8WWA1 MIR429-201ENST00000362106 83 ntBASIC0.84□□□□□ -2.27
TMEM40Q8WWA1 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
TMEM40Q8WWA1 AL353803.5-201ENST00000599815 141 ntBASIC0.84□□□□□ -2.27
TMEM40Q8WWA1 U7.6-201ENST00000610841 64 ntBASIC0.83□□□□□ -2.28
TMEM40Q8WWA1 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.83□□□□□ -2.28
TMEM40Q8WWA1 Y_RNA.69-201ENST00000362885 109 ntBASIC0.82□□□□□ -2.28
TMEM40Q8WWA1 AP000676.1-201ENST00000533307 52 ntBASIC0.81□□□□□ -2.28
TMEM40Q8WWA1 MIR3925-201ENST00000584674 77 ntBASIC0.81□□□□□ -2.28
TMEM40Q8WWA1 MIR499B-201ENST00000636498 73 ntBASIC0.81□□□□□ -2.28
TMEM40Q8WWA1 MIR508-201ENST00000384857 115 ntBASIC0.8□□□□□ -2.28
TMEM40Q8WWA1 MIR760-201ENST00000390220 80 ntBASIC0.8□□□□□ -2.28
TMEM40Q8WWA1 RNU6-1262P-201ENST00000516217 96 ntBASIC0.8□□□□□ -2.28
TMEM40Q8WWA1 RNU6-1206P-201ENST00000516339 103 ntBASIC0.8□□□□□ -2.28
TMEM40Q8WWA1 MIR6835-201ENST00000621552 64 ntBASIC0.8□□□□□ -2.28
TMEM40Q8WWA1 RNU6-986P-201ENST00000363133 102 ntBASIC0.79□□□□□ -2.28
TMEM40Q8WWA1 MIR518A1-201ENST00000385068 85 ntBASIC0.79□□□□□ -2.28
TMEM40Q8WWA1 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.79□□□□□ -2.28
TMEM40Q8WWA1 Y_RNA.698-201ENST00000516798 118 ntBASIC0.79□□□□□ -2.28
TMEM40Q8WWA1 MIR4432-201ENST00000581823 84 ntBASIC0.79□□□□□ -2.28
TMEM40Q8WWA1 RNU6-247P-201ENST00000362636 107 ntBASIC0.78□□□□□ -2.28
TMEM40Q8WWA1 RNU7-88P-201ENST00000458752 63 ntBASIC0.78□□□□□ -2.28
TMEM40Q8WWA1 AC108676.2-201ENST00000605225 163 ntBASIC0.78□□□□□ -2.28
TMEM40Q8WWA1 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
TMEM40Q8WWA1 SNORD114-26-201ENST00000363543 72 ntBASIC0.77□□□□□ -2.29
TMEM40Q8WWA1 SNORD115-23-201ENST00000364461 82 ntBASIC0.77□□□□□ -2.29
TMEM40Q8WWA1 RNU6-945P-201ENST00000383947 107 ntBASIC0.77□□□□□ -2.29
TMEM40Q8WWA1 RNU6-1267P-201ENST00000410747 107 ntBASIC0.77□□□□□ -2.29
TMEM40Q8WWA1 RNU7-160P-201ENST00000516660 62 ntBASIC0.77□□□□□ -2.29
TMEM40Q8WWA1 RNU7-129P-201ENST00000516128 62 ntBASIC0.76□□□□□ -2.29
TMEM40Q8WWA1 U7.5-201ENST00000517224 61 ntBASIC0.76□□□□□ -2.29
TMEM40Q8WWA1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
TMEM40Q8WWA1 RNU6-974P-201ENST00000384099 108 ntBASIC0.75□□□□□ -2.29
TMEM40Q8WWA1 MIR329-2-201ENST00000385029 84 ntBASIC0.75□□□□□ -2.29
TMEM40Q8WWA1 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
TMEM40Q8WWA1 MIR6513-201ENST00000621188 64 ntBASIC0.75□□□□□ -2.29
TMEM40Q8WWA1 uc_338.36-201ENST00000622331 158 ntBASIC0.75□□□□□ -2.29
TMEM40Q8WWA1 RNA5SP128-201ENST00000365305 116 ntBASIC0.74□□□□□ -2.29
TMEM40Q8WWA1 MIR548AA1-201ENST00000384971 97 ntBASIC0.74□□□□□ -2.29
TMEM40Q8WWA1 AC098934.3-201ENST00000430450 190 ntBASIC0.74□□□□□ -2.29
TMEM40Q8WWA1 MIR6779-201ENST00000617283 64 ntBASIC0.74□□□□□ -2.29
TMEM40Q8WWA1 RNU6-995P-201ENST00000391244 107 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms