Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MIR4677-201ENST00000584153 80 ntBASIC0.53□□□□□ -2.32
SIMC1Q8NDZ2 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
SIMC1Q8NDZ2 SNORD44.1-201ENST00000363202 61 ntBASIC0.52□□□□□ -2.33
SIMC1Q8NDZ2 RNA5SP215-201ENST00000363440 122 ntBASIC0.52□□□□□ -2.33
SIMC1Q8NDZ2 RNU6-499P-201ENST00000365615 107 ntBASIC0.52□□□□□ -2.33
SIMC1Q8NDZ2 MIR630-201ENST00000384957 97 ntBASIC0.52□□□□□ -2.33
SIMC1Q8NDZ2 MIR760-201ENST00000390220 80 ntBASIC0.52□□□□□ -2.33
SIMC1Q8NDZ2 RNU6-542P-201ENST00000516405 103 ntBASIC0.52□□□□□ -2.33
SIMC1Q8NDZ2 SNORA62.5-201ENST00000516634 120 ntBASIC0.52□□□□□ -2.33
SIMC1Q8NDZ2 RNU7-188P-201ENST00000517063 64 ntBASIC0.52□□□□□ -2.33
SIMC1Q8NDZ2 RNU6-1079P-201ENST00000362861 110 ntBASIC0.51□□□□□ -2.33
SIMC1Q8NDZ2 SNORD114-29-201ENST00000364819 70 ntBASIC0.51□□□□□ -2.33
SIMC1Q8NDZ2 SCARNA21.1-201ENST00000515996 128 ntBASIC0.51□□□□□ -2.33
SIMC1Q8NDZ2 MIR548AD-201ENST00000584780 82 ntBASIC0.51□□□□□ -2.33
SIMC1Q8NDZ2 SNORA25.5-201ENST00000363782 126 ntBASIC0.5□□□□□ -2.33
SIMC1Q8NDZ2 RNA5SP128-201ENST00000365305 116 ntBASIC0.5□□□□□ -2.33
SIMC1Q8NDZ2 AC090625.1-201ENST00000357130 210 ntBASIC0.49□□□□□ -2.33
SIMC1Q8NDZ2 RNU6-863P-201ENST00000515989 104 ntBASIC0.49□□□□□ -2.33
SIMC1Q8NDZ2 RNU6-175P-201ENST00000516896 107 ntBASIC0.49□□□□□ -2.33
SIMC1Q8NDZ2 AC243829.6-201ENST00000612652 106 ntBASIC0.49□□□□□ -2.33
SIMC1Q8NDZ2 U2.7-201ENST00000619197 100 ntBASIC0.49□□□□□ -2.33
SIMC1Q8NDZ2 AC090617.8-201ENST00000623339 167 ntBASIC0.49□□□□□ -2.33
SIMC1Q8NDZ2 AC079150.2-201ENST00000443733 78 ntBASIC0.48□□□□□ -2.33
SIMC1Q8NDZ2 SNORA68.3-201ENST00000515906 83 ntBASIC0.48□□□□□ -2.33
SIMC1Q8NDZ2 MIR466-201ENST00000580653 84 ntBASIC0.48□□□□□ -2.33
SIMC1Q8NDZ2 AC084368.1-201ENST00000620935 65 ntBASIC0.48□□□□□ -2.33
SIMC1Q8NDZ2 U6.96-201ENST00000636425 70 ntBASIC0.48□□□□□ -2.33
SIMC1Q8NDZ2 MIR499B-201ENST00000636498 73 ntBASIC0.48□□□□□ -2.33
SIMC1Q8NDZ2 RNU6-829P-201ENST00000363700 112 ntBASIC0.47□□□□□ -2.33
SIMC1Q8NDZ2 RNU6-669P-201ENST00000365575 107 ntBASIC0.47□□□□□ -2.33
SIMC1Q8NDZ2 VTRNA1-3-201ENST00000365645 89 ntBASIC0.47□□□□□ -2.33
SIMC1Q8NDZ2 RNU6-987P-201ENST00000384759 104 ntBASIC0.47□□□□□ -2.33
SIMC1Q8NDZ2 RNU6-1246P-201ENST00000391064 107 ntBASIC0.47□□□□□ -2.33
SIMC1Q8NDZ2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.47□□□□□ -2.33
SIMC1Q8NDZ2 RNA5SP476-201ENST00000516613 103 ntBASIC0.47□□□□□ -2.33
SIMC1Q8NDZ2 CYP3A54P-201ENST00000566950 75 ntBASIC0.47□□□□□ -2.33
SIMC1Q8NDZ2 MIR3925-201ENST00000584674 77 ntBASIC0.47□□□□□ -2.33
SIMC1Q8NDZ2 MIR103A1-201ENST00000362165 78 ntBASIC0.46□□□□□ -2.34
SIMC1Q8NDZ2 SNORA50A-201ENST00000384225 134 ntBASIC0.46□□□□□ -2.34
SIMC1Q8NDZ2 RNU6-35P-201ENST00000384530 107 ntBASIC0.46□□□□□ -2.34
SIMC1Q8NDZ2 SNORA49-201ENST00000386157 136 ntBASIC0.46□□□□□ -2.34
SIMC1Q8NDZ2 RNU4-37P-201ENST00000410214 84 ntBASIC0.46□□□□□ -2.34
SIMC1Q8NDZ2 RNU7-129P-201ENST00000516128 62 ntBASIC0.46□□□□□ -2.34
SIMC1Q8NDZ2 RNU7-174P-201ENST00000516248 59 ntBASIC0.46□□□□□ -2.34
SIMC1Q8NDZ2 RN7SL660P-201ENST00000614852 299 ntBASIC0.46□□□□□ -2.34
SIMC1Q8NDZ2 U4.4-201ENST00000620626 117 ntBASIC0.46□□□□□ -2.34
SIMC1Q8NDZ2 SNORA9.1-201ENST00000362412 131 ntBASIC0.45□□□□□ -2.34
SIMC1Q8NDZ2 SNORD60.1-201ENST00000362451 73 ntBASIC0.45□□□□□ -2.34
SIMC1Q8NDZ2 SNORD2-201ENST00000459163 69 ntBASIC0.45□□□□□ -2.34
SIMC1Q8NDZ2 RNU6-302P-201ENST00000365249 107 ntBASIC0.44□□□□□ -2.34
SIMC1Q8NDZ2 RNU6-614P-201ENST00000384369 107 ntBASIC0.44□□□□□ -2.34
SIMC1Q8NDZ2 MIR517B-201ENST00000385102 67 ntBASIC0.44□□□□□ -2.34
SIMC1Q8NDZ2 AC114737.2-201ENST00000421583 173 ntBASIC0.44□□□□□ -2.34
SIMC1Q8NDZ2 RNU6-92P-201ENST00000605893 104 ntBASIC0.44□□□□□ -2.34
SIMC1Q8NDZ2 U6.59-201ENST00000615686 107 ntBASIC0.44□□□□□ -2.34
SIMC1Q8NDZ2 MIRLET7D-201ENST00000362263 87 ntBASIC0.43□□□□□ -2.34
SIMC1Q8NDZ2 RNU6-446P-201ENST00000362827 106 ntBASIC0.43□□□□□ -2.34
SIMC1Q8NDZ2 RNU6-940P-201ENST00000363433 104 ntBASIC0.43□□□□□ -2.34
SIMC1Q8NDZ2 Y_RNA.236-201ENST00000364427 111 ntBASIC0.43□□□□□ -2.34
SIMC1Q8NDZ2 Y_RNA.325-201ENST00000365171 122 ntBASIC0.43□□□□□ -2.34
SIMC1Q8NDZ2 RNU6-1036P-201ENST00000383959 104 ntBASIC0.43□□□□□ -2.34
SIMC1Q8NDZ2 RNA5SP63-201ENST00000391225 112 ntBASIC0.43□□□□□ -2.34
SIMC1Q8NDZ2 RNU6-337P-201ENST00000391243 106 ntBASIC0.43□□□□□ -2.34
SIMC1Q8NDZ2 MIR876-201ENST00000401147 81 ntBASIC0.43□□□□□ -2.34
SIMC1Q8NDZ2 HAR1A.1-201ENST00000459583 118 ntBASIC0.43□□□□□ -2.34
SIMC1Q8NDZ2 RNU6-698P-201ENST00000363523 107 ntBASIC0.42□□□□□ -2.34
SIMC1Q8NDZ2 SNORD113-4-201ENST00000364802 75 ntBASIC0.42□□□□□ -2.34
SIMC1Q8NDZ2 RNU6-34P-201ENST00000364874 107 ntBASIC0.42□□□□□ -2.34
SIMC1Q8NDZ2 SNORD113-2-201ENST00000391082 72 ntBASIC0.42□□□□□ -2.34
SIMC1Q8NDZ2 RNU6-518P-201ENST00000516056 96 ntBASIC0.42□□□□□ -2.34
SIMC1Q8NDZ2 RNU6-122P-201ENST00000516818 107 ntBASIC0.42□□□□□ -2.34
SIMC1Q8NDZ2 SNORA41B-201ENST00000384785 128 ntBASIC0.41□□□□□ -2.34
SIMC1Q8NDZ2 MIR1255B2-201ENST00000408618 67 ntBASIC0.41□□□□□ -2.34
SIMC1Q8NDZ2 RNA5SP285-201ENST00000516619 119 ntBASIC0.41□□□□□ -2.34
SIMC1Q8NDZ2 SCARNA11.2-201ENST00000517183 154 ntBASIC0.41□□□□□ -2.34
SIMC1Q8NDZ2 MIR548AG1-201ENST00000579932 66 ntBASIC0.41□□□□□ -2.34
SIMC1Q8NDZ2 AC023932.2-201ENST00000603176 175 ntBASIC0.41□□□□□ -2.34
SIMC1Q8NDZ2 MIR6773-201ENST00000612812 74 ntBASIC0.41□□□□□ -2.34
SIMC1Q8NDZ2 MIR2909-201ENST00000617113 69 ntBASIC0.41□□□□□ -2.34
SIMC1Q8NDZ2 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.41□□□□□ -2.34
SIMC1Q8NDZ2 RNU6-1312P-201ENST00000362425 108 ntBASIC0.4□□□□□ -2.35
SIMC1Q8NDZ2 Y_RNA.246-201ENST00000364495 108 ntBASIC0.4□□□□□ -2.35
SIMC1Q8NDZ2 RNU6-815P-201ENST00000384080 113 ntBASIC0.4□□□□□ -2.35
SIMC1Q8NDZ2 MIR4514-201ENST00000581410 57 ntBASIC0.4□□□□□ -2.35
SIMC1Q8NDZ2 MIR7978-201ENST00000636158 59 ntBASIC0.4□□□□□ -2.35
SIMC1Q8NDZ2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
SIMC1Q8NDZ2 RNU6-1327P-201ENST00000365302 105 ntBASIC0.39□□□□□ -2.35
SIMC1Q8NDZ2 RNU6-127P-201ENST00000390897 107 ntBASIC0.39□□□□□ -2.35
SIMC1Q8NDZ2 RNU6-141P-201ENST00000410499 105 ntBASIC0.39□□□□□ -2.35
SIMC1Q8NDZ2 MIR3938-201ENST00000582157 103 ntBASIC0.39□□□□□ -2.35
SIMC1Q8NDZ2 RNU6-502P-201ENST00000362419 108 ntBASIC0.38□□□□□ -2.35
SIMC1Q8NDZ2 MIR519A2-201ENST00000384990 87 ntBASIC0.38□□□□□ -2.35
SIMC1Q8NDZ2 AL021921.1-201ENST00000442774 93 ntBASIC0.38□□□□□ -2.35
SIMC1Q8NDZ2 MIR6086-201ENST00000638065 55 ntBASIC0.38□□□□□ -2.35
SIMC1Q8NDZ2 SNORD115-25-201ENST00000362619 82 ntBASIC0.37□□□□□ -2.35
SIMC1Q8NDZ2 RNU6-936P-201ENST00000384005 107 ntBASIC0.37□□□□□ -2.35
SIMC1Q8NDZ2 MIR106A-201ENST00000384870 81 ntBASIC0.37□□□□□ -2.35
SIMC1Q8NDZ2 RNU6-782P-201ENST00000516852 104 ntBASIC0.37□□□□□ -2.35
SIMC1Q8NDZ2 MIRLET7B-201ENST00000385140 83 ntBASIC0.36□□□□□ -2.35
SIMC1Q8NDZ2 MIR527-201ENST00000385244 85 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms