Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RNU6-1223P-201ENST00000517124 104 ntBASIC1.38□□□□□ -2.19
NPAS3Q8IXF0 MIR96-201ENST00000362288 78 ntBASIC1.37□□□□□ -2.19
NPAS3Q8IXF0 SNORD45.2-201ENST00000363552 72 ntBASIC1.37□□□□□ -2.19
NPAS3Q8IXF0 RNU6-530P-201ENST00000391180 107 ntBASIC1.37□□□□□ -2.19
NPAS3Q8IXF0 SNORD2-201ENST00000459163 69 ntBASIC1.37□□□□□ -2.19
NPAS3Q8IXF0 U7.5-201ENST00000517224 61 ntBASIC1.37□□□□□ -2.19
NPAS3Q8IXF0 RNU6-502P-201ENST00000362419 108 ntBASIC1.36□□□□□ -2.19
NPAS3Q8IXF0 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
NPAS3Q8IXF0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.36□□□□□ -2.19
NPAS3Q8IXF0 SNORD63.2-201ENST00000516303 64 ntBASIC1.36□□□□□ -2.19
NPAS3Q8IXF0 AC108676.2-201ENST00000605225 163 ntBASIC1.36□□□□□ -2.19
NPAS3Q8IXF0 SNORD99-201ENST00000408612 74 ntBASIC1.35□□□□□ -2.19
NPAS3Q8IXF0 MIR548H4-201ENST00000408689 111 ntBASIC1.35□□□□□ -2.19
NPAS3Q8IXF0 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
NPAS3Q8IXF0 RNU6-175P-201ENST00000516896 107 ntBASIC1.35□□□□□ -2.19
NPAS3Q8IXF0 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.34□□□□□ -2.19
NPAS3Q8IXF0 SNORD114-26-201ENST00000363543 72 ntBASIC1.34□□□□□ -2.19
NPAS3Q8IXF0 AC069271.1-201ENST00000445577 156 ntBASIC1.34□□□□□ -2.19
NPAS3Q8IXF0 AC022709.1-201ENST00000615967 87 ntBASIC1.34□□□□□ -2.19
NPAS3Q8IXF0 MIR6515-201ENST00000619843 57 ntBASIC1.34□□□□□ -2.19
NPAS3Q8IXF0 PVT1_3.1-201ENST00000620853 95 ntBASIC1.34□□□□□ -2.19
NPAS3Q8IXF0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
NPAS3Q8IXF0 RNU1-29P-201ENST00000606574 126 ntBASIC1.33□□□□□ -2.2
NPAS3Q8IXF0 Y_RNA.374-201ENST00000365606 101 ntBASIC1.32□□□□□ -2.2
NPAS3Q8IXF0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.32□□□□□ -2.2
NPAS3Q8IXF0 RNA5SP222-201ENST00000411039 105 ntBASIC1.31□□□□□ -2.2
NPAS3Q8IXF0 MIR5706-201ENST00000579841 80 ntBASIC1.31□□□□□ -2.2
NPAS3Q8IXF0 MIR7974-201ENST00000615835 79 ntBASIC1.31□□□□□ -2.2
NPAS3Q8IXF0 SNORD114-27-201ENST00000363766 70 ntBASIC1.3□□□□□ -2.2
NPAS3Q8IXF0 Y_RNA.206-201ENST00000364136 102 ntBASIC1.3□□□□□ -2.2
NPAS3Q8IXF0 RNU1-93P-201ENST00000364704 169 ntBASIC1.3□□□□□ -2.2
NPAS3Q8IXF0 SNORD57-201ENST00000448188 72 ntBASIC1.3□□□□□ -2.2
NPAS3Q8IXF0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.3□□□□□ -2.2
NPAS3Q8IXF0 Y_RNA.698-201ENST00000516798 118 ntBASIC1.3□□□□□ -2.2
NPAS3Q8IXF0 SNORD63.1-201ENST00000516178 80 ntBASIC1.29□□□□□ -2.2
NPAS3Q8IXF0 RNU6-1232P-201ENST00000516299 86 ntBASIC1.29□□□□□ -2.2
NPAS3Q8IXF0 RNU6-1174P-201ENST00000517278 101 ntBASIC1.29□□□□□ -2.2
NPAS3Q8IXF0 RNU6-1326P-201ENST00000391262 107 ntBASIC1.28□□□□□ -2.2
NPAS3Q8IXF0 RPS29P1-201ENST00000465274 159 ntBASIC1.28□□□□□ -2.2
NPAS3Q8IXF0 MTRNR2L9-201ENST00000622562 75 ntBASIC1.28□□□□□ -2.2
NPAS3Q8IXF0 Y_RNA.345-201ENST00000365384 92 ntBASIC1.27□□□□□ -2.21
NPAS3Q8IXF0 AP000676.1-201ENST00000533307 52 ntBASIC1.27□□□□□ -2.21
NPAS3Q8IXF0 MIR3170-201ENST00000582699 77 ntBASIC1.27□□□□□ -2.21
NPAS3Q8IXF0 SNORA25.18-201ENST00000607153 114 ntBASIC1.27□□□□□ -2.21
NPAS3Q8IXF0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
NPAS3Q8IXF0 Y_RNA.423-201ENST00000384057 113 ntBASIC1.26□□□□□ -2.21
NPAS3Q8IXF0 MIR520E-201ENST00000384867 87 ntBASIC1.26□□□□□ -2.21
NPAS3Q8IXF0 RNA5SP436-201ENST00000516020 115 ntBASIC1.26□□□□□ -2.21
NPAS3Q8IXF0 RNU6-229P-201ENST00000516614 102 ntBASIC1.26□□□□□ -2.21
NPAS3Q8IXF0 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
NPAS3Q8IXF0 snoR1.1-201ENST00000628177 80 ntBASIC1.26□□□□□ -2.21
NPAS3Q8IXF0 MIR6767-201ENST00000637302 66 ntBASIC1.26□□□□□ -2.21
NPAS3Q8IXF0 MIR19B1-201ENST00000384829 87 ntBASIC1.25□□□□□ -2.21
NPAS3Q8IXF0 MIR200A-201ENST00000384875 90 ntBASIC1.25□□□□□ -2.21
NPAS3Q8IXF0 RPS29P23-201ENST00000458635 123 ntBASIC1.25□□□□□ -2.21
NPAS3Q8IXF0 AC084368.1-201ENST00000620935 65 ntBASIC1.25□□□□□ -2.21
NPAS3Q8IXF0 MIR4317-201ENST00000637586 65 ntBASIC1.25□□□□□ -2.21
NPAS3Q8IXF0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.24□□□□□ -2.21
NPAS3Q8IXF0 uc_338.36-201ENST00000622331 158 ntBASIC1.24□□□□□ -2.21
NPAS3Q8IXF0 RNA5SP517-201ENST00000364724 117 ntBASIC1.23□□□□□ -2.21
NPAS3Q8IXF0 SNORA2A-201ENST00000383885 135 ntBASIC1.23□□□□□ -2.21
NPAS3Q8IXF0 SNORA36.2-201ENST00000384004 127 ntBASIC1.23□□□□□ -2.21
NPAS3Q8IXF0 SNORD111B-201ENST00000408587 80 ntBASIC1.23□□□□□ -2.21
NPAS3Q8IXF0 RNA5SP255-201ENST00000516370 107 ntBASIC1.23□□□□□ -2.21
NPAS3Q8IXF0 RN7SL660P-201ENST00000614852 299 ntBASIC1.23□□□□□ -2.21
NPAS3Q8IXF0 MIR6888-201ENST00000621977 67 ntBASIC1.23□□□□□ -2.21
NPAS3Q8IXF0 SNORD115-23-201ENST00000364461 82 ntBASIC1.22□□□□□ -2.21
NPAS3Q8IXF0 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
NPAS3Q8IXF0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
NPAS3Q8IXF0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
NPAS3Q8IXF0 Y_RNA.30-201ENST00000362572 97 ntBASIC1.21□□□□□ -2.22
NPAS3Q8IXF0 MIR598-201ENST00000384868 97 ntBASIC1.21□□□□□ -2.22
NPAS3Q8IXF0 RNU6-1111P-201ENST00000391118 107 ntBASIC1.21□□□□□ -2.22
NPAS3Q8IXF0 MIR4677-201ENST00000584153 80 ntBASIC1.21□□□□□ -2.22
NPAS3Q8IXF0 RNU4-45P-201ENST00000365469 141 ntBASIC1.2□□□□□ -2.22
NPAS3Q8IXF0 ACA64.5-201ENST00000516207 127 ntBASIC1.2□□□□□ -2.22
NPAS3Q8IXF0 SNORD114-24-201ENST00000365029 72 ntBASIC1.19□□□□□ -2.22
NPAS3Q8IXF0 SNORD26-201ENST00000384147 75 ntBASIC1.19□□□□□ -2.22
NPAS3Q8IXF0 AC087343.1-201ENST00000477341 475 ntBASIC1.19□□□□□ -2.22
NPAS3Q8IXF0 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
NPAS3Q8IXF0 U7.6-201ENST00000610841 64 ntBASIC1.19□□□□□ -2.22
NPAS3Q8IXF0 MIR501-201ENST00000390204 84 ntBASIC1.18□□□□□ -2.22
NPAS3Q8IXF0 RNU6-258P-201ENST00000390884 101 ntBASIC1.18□□□□□ -2.22
NPAS3Q8IXF0 MIR4464-201ENST00000580818 92 ntBASIC1.18□□□□□ -2.22
NPAS3Q8IXF0 MIR6507-201ENST00000613630 70 ntBASIC1.18□□□□□ -2.22
NPAS3Q8IXF0 MIR548Q-201ENST00000408404 100 ntBASIC1.17□□□□□ -2.22
NPAS3Q8IXF0 MIR548J-201ENST00000408833 112 ntBASIC1.17□□□□□ -2.22
NPAS3Q8IXF0 MIR151B-201ENST00000584249 96 ntBASIC1.17□□□□□ -2.22
NPAS3Q8IXF0 MIR6788-201ENST00000618842 66 ntBASIC1.17□□□□□ -2.22
NPAS3Q8IXF0 Y_RNA.321-201ENST00000365149 102 ntBASIC1.16□□□□□ -2.22
NPAS3Q8IXF0 AL445584.3-201ENST00000617173 78 ntBASIC1.16□□□□□ -2.22
NPAS3Q8IXF0 MIR4426-201ENST00000640330 63 ntBASIC1.16□□□□□ -2.22
NPAS3Q8IXF0 MIR26B-201ENST00000362251 77 ntBASIC1.15□□□□□ -2.23
NPAS3Q8IXF0 RNU6-1047P-201ENST00000364418 107 ntBASIC1.15□□□□□ -2.23
NPAS3Q8IXF0 MIR618-201ENST00000385287 98 ntBASIC1.15□□□□□ -2.23
NPAS3Q8IXF0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
NPAS3Q8IXF0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
NPAS3Q8IXF0 RNU4-54P-201ENST00000516428 129 ntBASIC1.14□□□□□ -2.23
NPAS3Q8IXF0 MIR1468-201ENST00000410600 86 ntBASIC1.13□□□□□ -2.23
NPAS3Q8IXF0 RNU6-1238P-201ENST00000517215 102 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 282.6 ms