Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 MIR429-201ENST00000362106 83 ntBASIC1.28□□□□□ -2.2
SH3RF1Q7Z6J0 MIR373-201ENST00000362273 69 ntBASIC1.28□□□□□ -2.2
SH3RF1Q7Z6J0 RNA5SP470-201ENST00000516463 106 ntBASIC1.28□□□□□ -2.2
SH3RF1Q7Z6J0 MIR4752-201ENST00000579672 72 ntBASIC1.28□□□□□ -2.2
SH3RF1Q7Z6J0 AL353765.1-201ENST00000605514 183 ntBASIC1.28□□□□□ -2.2
SH3RF1Q7Z6J0 RNU6-924P-201ENST00000362926 108 ntBASIC1.27□□□□□ -2.21
SH3RF1Q7Z6J0 SNORA36.2-201ENST00000384004 127 ntBASIC1.27□□□□□ -2.21
SH3RF1Q7Z6J0 RNU6-458P-201ENST00000384179 107 ntBASIC1.27□□□□□ -2.21
SH3RF1Q7Z6J0 SNORA49-201ENST00000386157 136 ntBASIC1.27□□□□□ -2.21
SH3RF1Q7Z6J0 U6.58-201ENST00000613107 107 ntBASIC1.27□□□□□ -2.21
SH3RF1Q7Z6J0 Y_RNA.178-201ENST00000363832 102 ntBASIC1.26□□□□□ -2.21
SH3RF1Q7Z6J0 RNU6-1250P-201ENST00000391218 107 ntBASIC1.26□□□□□ -2.21
SH3RF1Q7Z6J0 RNU7-160P-201ENST00000516660 62 ntBASIC1.26□□□□□ -2.21
SH3RF1Q7Z6J0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
SH3RF1Q7Z6J0 MIR4661-201ENST00000582720 75 ntBASIC1.25□□□□□ -2.21
SH3RF1Q7Z6J0 MIRLET7B-201ENST00000385140 83 ntBASIC1.24□□□□□ -2.21
SH3RF1Q7Z6J0 MIR1285-1-201ENST00000408593 84 ntBASIC1.24□□□□□ -2.21
SH3RF1Q7Z6J0 RN7SL793P-201ENST00000583259 296 ntBASIC1.24□□□□□ -2.21
SH3RF1Q7Z6J0 Y_RNA.30-201ENST00000362572 97 ntBASIC1.23□□□□□ -2.21
SH3RF1Q7Z6J0 RNU6-1206P-201ENST00000516339 103 ntBASIC1.23□□□□□ -2.21
SH3RF1Q7Z6J0 U7.6-201ENST00000610841 64 ntBASIC1.23□□□□□ -2.21
SH3RF1Q7Z6J0 SNORD114-29-201ENST00000364819 70 ntBASIC1.22□□□□□ -2.21
SH3RF1Q7Z6J0 Y_RNA.69-201ENST00000362885 109 ntBASIC1.21□□□□□ -2.22
SH3RF1Q7Z6J0 RNU6-598P-201ENST00000364017 105 ntBASIC1.21□□□□□ -2.22
SH3RF1Q7Z6J0 RNY1P8-201ENST00000383970 114 ntBASIC1.21□□□□□ -2.22
SH3RF1Q7Z6J0 RNA5SP517-201ENST00000364724 117 ntBASIC1.2□□□□□ -2.22
SH3RF1Q7Z6J0 MIR140-201ENST00000385282 100 ntBASIC1.2□□□□□ -2.22
SH3RF1Q7Z6J0 RNU6-175P-201ENST00000516896 107 ntBASIC1.2□□□□□ -2.22
SH3RF1Q7Z6J0 AC211469.2-201ENST00000605461 205 ntBASIC1.2□□□□□ -2.22
SH3RF1Q7Z6J0 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.2□□□□□ -2.22
SH3RF1Q7Z6J0 RNU6-502P-201ENST00000362419 108 ntBASIC1.19□□□□□ -2.22
SH3RF1Q7Z6J0 MIR579-201ENST00000385221 98 ntBASIC1.19□□□□□ -2.22
SH3RF1Q7Z6J0 RNU7-151P-201ENST00000516930 53 ntBASIC1.19□□□□□ -2.22
SH3RF1Q7Z6J0 MIR548AL-201ENST00000578416 97 ntBASIC1.19□□□□□ -2.22
SH3RF1Q7Z6J0 MIR3973-201ENST00000579824 107 ntBASIC1.19□□□□□ -2.22
SH3RF1Q7Z6J0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
SH3RF1Q7Z6J0 RNU6-986P-201ENST00000363133 102 ntBASIC1.18□□□□□ -2.22
SH3RF1Q7Z6J0 MIR216A-201ENST00000385063 110 ntBASIC1.18□□□□□ -2.22
SH3RF1Q7Z6J0 SNORD71-201ENST00000411292 86 ntBASIC1.18□□□□□ -2.22
SH3RF1Q7Z6J0 AC069271.1-201ENST00000445577 156 ntBASIC1.18□□□□□ -2.22
SH3RF1Q7Z6J0 RNU7-188P-201ENST00000517063 64 ntBASIC1.18□□□□□ -2.22
SH3RF1Q7Z6J0 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
SH3RF1Q7Z6J0 U2.18-201ENST00000622185 84 ntBASIC1.18□□□□□ -2.22
SH3RF1Q7Z6J0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.18□□□□□ -2.22
SH3RF1Q7Z6J0 SNORA2A-201ENST00000383885 135 ntBASIC1.17□□□□□ -2.22
SH3RF1Q7Z6J0 OR2A41P-201ENST00000473586 105 ntBASIC1.17□□□□□ -2.22
SH3RF1Q7Z6J0 CYP3A137P-201ENST00000562436 69 ntBASIC1.17□□□□□ -2.22
SH3RF1Q7Z6J0 SNORA25.18-201ENST00000607153 114 ntBASIC1.17□□□□□ -2.22
SH3RF1Q7Z6J0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.16□□□□□ -2.22
SH3RF1Q7Z6J0 RNU6-229P-201ENST00000516614 102 ntBASIC1.16□□□□□ -2.22
SH3RF1Q7Z6J0 RNU6-782P-201ENST00000516852 104 ntBASIC1.16□□□□□ -2.22
SH3RF1Q7Z6J0 MIR125B1-201ENST00000385236 88 ntBASIC1.15□□□□□ -2.23
SH3RF1Q7Z6J0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
SH3RF1Q7Z6J0 SNORA40.8-201ENST00000411034 126 ntBASIC1.15□□□□□ -2.23
SH3RF1Q7Z6J0 AC103810.9-201ENST00000606688 112 ntBASIC1.14□□□□□ -2.23
SH3RF1Q7Z6J0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
SH3RF1Q7Z6J0 RNU4-38P-201ENST00000364472 129 ntBASIC1.13□□□□□ -2.23
SH3RF1Q7Z6J0 AL451105.1-201ENST00000450005 189 ntBASIC1.13□□□□□ -2.23
SH3RF1Q7Z6J0 ACA64.5-201ENST00000516207 127 ntBASIC1.13□□□□□ -2.23
SH3RF1Q7Z6J0 AL353803.5-201ENST00000599815 141 ntBASIC1.13□□□□□ -2.23
SH3RF1Q7Z6J0 RNU6-828P-201ENST00000364876 107 ntBASIC1.12□□□□□ -2.23
SH3RF1Q7Z6J0 MIR608-201ENST00000384820 100 ntBASIC1.12□□□□□ -2.23
SH3RF1Q7Z6J0 MIR329-2-201ENST00000385029 84 ntBASIC1.12□□□□□ -2.23
SH3RF1Q7Z6J0 RNU6-696P-201ENST00000390834 107 ntBASIC1.12□□□□□ -2.23
SH3RF1Q7Z6J0 RNU6-724P-201ENST00000390958 105 ntBASIC1.12□□□□□ -2.23
SH3RF1Q7Z6J0 SNORD118-201ENST00000363593 134 ntBASIC1.11□□□□□ -2.23
SH3RF1Q7Z6J0 SNORD115-23-201ENST00000364461 82 ntBASIC1.11□□□□□ -2.23
SH3RF1Q7Z6J0 Y_RNA.423-201ENST00000384057 113 ntBASIC1.11□□□□□ -2.23
SH3RF1Q7Z6J0 MIR548AA1-201ENST00000384971 97 ntBASIC1.11□□□□□ -2.23
SH3RF1Q7Z6J0 RNU6-1262P-201ENST00000516217 96 ntBASIC1.11□□□□□ -2.23
SH3RF1Q7Z6J0 RNU6-1232P-201ENST00000516299 86 ntBASIC1.11□□□□□ -2.23
SH3RF1Q7Z6J0 MIR4677-201ENST00000584153 80 ntBASIC1.11□□□□□ -2.23
SH3RF1Q7Z6J0 RNU6-1036P-201ENST00000383959 104 ntBASIC1.1□□□□□ -2.23
SH3RF1Q7Z6J0 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.1□□□□□ -2.23
SH3RF1Q7Z6J0 MIR4698-201ENST00000577795 80 ntBASIC1.09□□□□□ -2.23
SH3RF1Q7Z6J0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
SH3RF1Q7Z6J0 Y_RNA.68-201ENST00000362881 102 ntBASIC1.08□□□□□ -2.24
SH3RF1Q7Z6J0 MIR532-201ENST00000385025 91 ntBASIC1.08□□□□□ -2.24
SH3RF1Q7Z6J0 MIR501-201ENST00000390204 84 ntBASIC1.08□□□□□ -2.24
SH3RF1Q7Z6J0 Y_RNA.698-201ENST00000516798 118 ntBASIC1.08□□□□□ -2.24
SH3RF1Q7Z6J0 RNU6-995P-201ENST00000391244 107 ntBASIC1.07□□□□□ -2.24
SH3RF1Q7Z6J0 RNU6-848P-201ENST00000515948 107 ntBASIC1.07□□□□□ -2.24
SH3RF1Q7Z6J0 RNU6-617P-201ENST00000516147 107 ntBASIC1.07□□□□□ -2.24
SH3RF1Q7Z6J0 RNU6-473P-201ENST00000516164 107 ntBASIC1.07□□□□□ -2.24
SH3RF1Q7Z6J0 RNU6-1049P-201ENST00000516414 107 ntBASIC1.07□□□□□ -2.24
SH3RF1Q7Z6J0 MIR4714-201ENST00000580728 77 ntBASIC1.07□□□□□ -2.24
SH3RF1Q7Z6J0 RNA5SP457-201ENST00000363657 124 ntBASIC1.06□□□□□ -2.24
SH3RF1Q7Z6J0 RNU6-110P-201ENST00000384508 104 ntBASIC1.06□□□□□ -2.24
SH3RF1Q7Z6J0 MIR518A1-201ENST00000385068 85 ntBASIC1.06□□□□□ -2.24
SH3RF1Q7Z6J0 AC108676.2-201ENST00000605225 163 ntBASIC1.06□□□□□ -2.24
SH3RF1Q7Z6J0 MIR6857-201ENST00000613267 93 ntBASIC1.06□□□□□ -2.24
SH3RF1Q7Z6J0 RN7SL660P-201ENST00000614852 299 ntBASIC1.06□□□□□ -2.24
SH3RF1Q7Z6J0 RNU6-1204P-201ENST00000363948 107 ntBASIC1.05□□□□□ -2.24
SH3RF1Q7Z6J0 MIR193B-201ENST00000384907 83 ntBASIC1.05□□□□□ -2.24
SH3RF1Q7Z6J0 RNU6-1267P-201ENST00000410747 107 ntBASIC1.05□□□□□ -2.24
SH3RF1Q7Z6J0 AC084368.1-201ENST00000620935 65 ntBASIC1.05□□□□□ -2.24
SH3RF1Q7Z6J0 RNU6-945P-201ENST00000383947 107 ntBASIC1.04□□□□□ -2.24
SH3RF1Q7Z6J0 AL590095.2-201ENST00000604136 117 ntBASIC1.04□□□□□ -2.24
SH3RF1Q7Z6J0 MIR6755-201ENST00000619993 66 ntBASIC1.04□□□□□ -2.24
SH3RF1Q7Z6J0 Y_RNA.139-201ENST00000363464 102 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 260.4 ms