Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 MIR429-201ENST00000362106 83 ntBASIC1.28□□□□□ -2.2
SH3RF1Q7Z6J0 MIR373-201ENST00000362273 69 ntBASIC1.28□□□□□ -2.2
SH3RF1Q7Z6J0 RNA5SP470-201ENST00000516463 106 ntBASIC1.28□□□□□ -2.2
SH3RF1Q7Z6J0 MIR4752-201ENST00000579672 72 ntBASIC1.28□□□□□ -2.2
SH3RF1Q7Z6J0 AL353765.1-201ENST00000605514 183 ntBASIC1.28□□□□□ -2.2
SH3RF1Q7Z6J0 RNU6-924P-201ENST00000362926 108 ntBASIC1.27□□□□□ -2.21
SH3RF1Q7Z6J0 SNORA36.2-201ENST00000384004 127 ntBASIC1.27□□□□□ -2.21
SH3RF1Q7Z6J0 RNU6-458P-201ENST00000384179 107 ntBASIC1.27□□□□□ -2.21
SH3RF1Q7Z6J0 SNORA49-201ENST00000386157 136 ntBASIC1.27□□□□□ -2.21
SH3RF1Q7Z6J0 U6.58-201ENST00000613107 107 ntBASIC1.27□□□□□ -2.21
SH3RF1Q7Z6J0 Y_RNA.178-201ENST00000363832 102 ntBASIC1.26□□□□□ -2.21
SH3RF1Q7Z6J0 RNU6-1250P-201ENST00000391218 107 ntBASIC1.26□□□□□ -2.21
SH3RF1Q7Z6J0 RNU7-160P-201ENST00000516660 62 ntBASIC1.26□□□□□ -2.21
SH3RF1Q7Z6J0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
SH3RF1Q7Z6J0 MIR4661-201ENST00000582720 75 ntBASIC1.25□□□□□ -2.21
SH3RF1Q7Z6J0 MIRLET7B-201ENST00000385140 83 ntBASIC1.24□□□□□ -2.21
SH3RF1Q7Z6J0 MIR1285-1-201ENST00000408593 84 ntBASIC1.24□□□□□ -2.21
SH3RF1Q7Z6J0 RN7SL793P-201ENST00000583259 296 ntBASIC1.24□□□□□ -2.21
SH3RF1Q7Z6J0 Y_RNA.30-201ENST00000362572 97 ntBASIC1.23□□□□□ -2.21
SH3RF1Q7Z6J0 RNU6-1206P-201ENST00000516339 103 ntBASIC1.23□□□□□ -2.21
SH3RF1Q7Z6J0 U7.6-201ENST00000610841 64 ntBASIC1.23□□□□□ -2.21
SH3RF1Q7Z6J0 SNORD114-29-201ENST00000364819 70 ntBASIC1.22□□□□□ -2.21
SH3RF1Q7Z6J0 Y_RNA.69-201ENST00000362885 109 ntBASIC1.21□□□□□ -2.22
SH3RF1Q7Z6J0 RNU6-598P-201ENST00000364017 105 ntBASIC1.21□□□□□ -2.22
SH3RF1Q7Z6J0 RNY1P8-201ENST00000383970 114 ntBASIC1.21□□□□□ -2.22
SH3RF1Q7Z6J0 RNA5SP517-201ENST00000364724 117 ntBASIC1.2□□□□□ -2.22
SH3RF1Q7Z6J0 MIR140-201ENST00000385282 100 ntBASIC1.2□□□□□ -2.22
SH3RF1Q7Z6J0 RNU6-175P-201ENST00000516896 107 ntBASIC1.2□□□□□ -2.22
SH3RF1Q7Z6J0 AC211469.2-201ENST00000605461 205 ntBASIC1.2□□□□□ -2.22
SH3RF1Q7Z6J0 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.2□□□□□ -2.22
SH3RF1Q7Z6J0 RNU6-502P-201ENST00000362419 108 ntBASIC1.19□□□□□ -2.22
SH3RF1Q7Z6J0 MIR579-201ENST00000385221 98 ntBASIC1.19□□□□□ -2.22
SH3RF1Q7Z6J0 RNU7-151P-201ENST00000516930 53 ntBASIC1.19□□□□□ -2.22
SH3RF1Q7Z6J0 MIR548AL-201ENST00000578416 97 ntBASIC1.19□□□□□ -2.22
SH3RF1Q7Z6J0 MIR3973-201ENST00000579824 107 ntBASIC1.19□□□□□ -2.22
SH3RF1Q7Z6J0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
SH3RF1Q7Z6J0 RNU6-986P-201ENST00000363133 102 ntBASIC1.18□□□□□ -2.22
SH3RF1Q7Z6J0 MIR216A-201ENST00000385063 110 ntBASIC1.18□□□□□ -2.22
SH3RF1Q7Z6J0 SNORD71-201ENST00000411292 86 ntBASIC1.18□□□□□ -2.22
SH3RF1Q7Z6J0 AC069271.1-201ENST00000445577 156 ntBASIC1.18□□□□□ -2.22
SH3RF1Q7Z6J0 RNU7-188P-201ENST00000517063 64 ntBASIC1.18□□□□□ -2.22
SH3RF1Q7Z6J0 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
SH3RF1Q7Z6J0 U2.18-201ENST00000622185 84 ntBASIC1.18□□□□□ -2.22
SH3RF1Q7Z6J0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.18□□□□□ -2.22
SH3RF1Q7Z6J0 SNORA2A-201ENST00000383885 135 ntBASIC1.17□□□□□ -2.22
SH3RF1Q7Z6J0 OR2A41P-201ENST00000473586 105 ntBASIC1.17□□□□□ -2.22
SH3RF1Q7Z6J0 CYP3A137P-201ENST00000562436 69 ntBASIC1.17□□□□□ -2.22
SH3RF1Q7Z6J0 SNORA25.18-201ENST00000607153 114 ntBASIC1.17□□□□□ -2.22
SH3RF1Q7Z6J0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.16□□□□□ -2.22
SH3RF1Q7Z6J0 RNU6-229P-201ENST00000516614 102 ntBASIC1.16□□□□□ -2.22
SH3RF1Q7Z6J0 RNU6-782P-201ENST00000516852 104 ntBASIC1.16□□□□□ -2.22
SH3RF1Q7Z6J0 MIR125B1-201ENST00000385236 88 ntBASIC1.15□□□□□ -2.23
SH3RF1Q7Z6J0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
SH3RF1Q7Z6J0 SNORA40.8-201ENST00000411034 126 ntBASIC1.15□□□□□ -2.23
SH3RF1Q7Z6J0 AC103810.9-201ENST00000606688 112 ntBASIC1.14□□□□□ -2.23
SH3RF1Q7Z6J0 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
SH3RF1Q7Z6J0 RNU4-38P-201ENST00000364472 129 ntBASIC1.13□□□□□ -2.23
SH3RF1Q7Z6J0 AL451105.1-201ENST00000450005 189 ntBASIC1.13□□□□□ -2.23
SH3RF1Q7Z6J0 ACA64.5-201ENST00000516207 127 ntBASIC1.13□□□□□ -2.23
SH3RF1Q7Z6J0 AL353803.5-201ENST00000599815 141 ntBASIC1.13□□□□□ -2.23
SH3RF1Q7Z6J0 RNU6-828P-201ENST00000364876 107 ntBASIC1.12□□□□□ -2.23
SH3RF1Q7Z6J0 MIR608-201ENST00000384820 100 ntBASIC1.12□□□□□ -2.23
SH3RF1Q7Z6J0 MIR329-2-201ENST00000385029 84 ntBASIC1.12□□□□□ -2.23
SH3RF1Q7Z6J0 RNU6-696P-201ENST00000390834 107 ntBASIC1.12□□□□□ -2.23
SH3RF1Q7Z6J0 RNU6-724P-201ENST00000390958 105 ntBASIC1.12□□□□□ -2.23
SH3RF1Q7Z6J0 SNORD118-201ENST00000363593 134 ntBASIC1.11□□□□□ -2.23
SH3RF1Q7Z6J0 SNORD115-23-201ENST00000364461 82 ntBASIC1.11□□□□□ -2.23
SH3RF1Q7Z6J0 Y_RNA.423-201ENST00000384057 113 ntBASIC1.11□□□□□ -2.23
SH3RF1Q7Z6J0 MIR548AA1-201ENST00000384971 97 ntBASIC1.11□□□□□ -2.23
SH3RF1Q7Z6J0 RNU6-1262P-201ENST00000516217 96 ntBASIC1.11□□□□□ -2.23
SH3RF1Q7Z6J0 RNU6-1232P-201ENST00000516299 86 ntBASIC1.11□□□□□ -2.23
SH3RF1Q7Z6J0 MIR4677-201ENST00000584153 80 ntBASIC1.11□□□□□ -2.23
SH3RF1Q7Z6J0 RNU6-1036P-201ENST00000383959 104 ntBASIC1.1□□□□□ -2.23
SH3RF1Q7Z6J0 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.1□□□□□ -2.23
SH3RF1Q7Z6J0 MIR4698-201ENST00000577795 80 ntBASIC1.09□□□□□ -2.23
SH3RF1Q7Z6J0 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
SH3RF1Q7Z6J0 Y_RNA.68-201ENST00000362881 102 ntBASIC1.08□□□□□ -2.24
SH3RF1Q7Z6J0 MIR532-201ENST00000385025 91 ntBASIC1.08□□□□□ -2.24
SH3RF1Q7Z6J0 MIR501-201ENST00000390204 84 ntBASIC1.08□□□□□ -2.24
SH3RF1Q7Z6J0 Y_RNA.698-201ENST00000516798 118 ntBASIC1.08□□□□□ -2.24
SH3RF1Q7Z6J0 RNU6-995P-201ENST00000391244 107 ntBASIC1.07□□□□□ -2.24
SH3RF1Q7Z6J0 RNU6-848P-201ENST00000515948 107 ntBASIC1.07□□□□□ -2.24
SH3RF1Q7Z6J0 RNU6-617P-201ENST00000516147 107 ntBASIC1.07□□□□□ -2.24
SH3RF1Q7Z6J0 RNU6-473P-201ENST00000516164 107 ntBASIC1.07□□□□□ -2.24
SH3RF1Q7Z6J0 RNU6-1049P-201ENST00000516414 107 ntBASIC1.07□□□□□ -2.24
SH3RF1Q7Z6J0 MIR4714-201ENST00000580728 77 ntBASIC1.07□□□□□ -2.24
SH3RF1Q7Z6J0 RNA5SP457-201ENST00000363657 124 ntBASIC1.06□□□□□ -2.24
SH3RF1Q7Z6J0 RNU6-110P-201ENST00000384508 104 ntBASIC1.06□□□□□ -2.24
SH3RF1Q7Z6J0 MIR518A1-201ENST00000385068 85 ntBASIC1.06□□□□□ -2.24
SH3RF1Q7Z6J0 AC108676.2-201ENST00000605225 163 ntBASIC1.06□□□□□ -2.24
SH3RF1Q7Z6J0 MIR6857-201ENST00000613267 93 ntBASIC1.06□□□□□ -2.24
SH3RF1Q7Z6J0 RN7SL660P-201ENST00000614852 299 ntBASIC1.06□□□□□ -2.24
SH3RF1Q7Z6J0 RNU6-1204P-201ENST00000363948 107 ntBASIC1.05□□□□□ -2.24
SH3RF1Q7Z6J0 MIR193B-201ENST00000384907 83 ntBASIC1.05□□□□□ -2.24
SH3RF1Q7Z6J0 RNU6-1267P-201ENST00000410747 107 ntBASIC1.05□□□□□ -2.24
SH3RF1Q7Z6J0 AC084368.1-201ENST00000620935 65 ntBASIC1.05□□□□□ -2.24
SH3RF1Q7Z6J0 RNU6-945P-201ENST00000383947 107 ntBASIC1.04□□□□□ -2.24
SH3RF1Q7Z6J0 AL590095.2-201ENST00000604136 117 ntBASIC1.04□□□□□ -2.24
SH3RF1Q7Z6J0 MIR6755-201ENST00000619993 66 ntBASIC1.04□□□□□ -2.24
SH3RF1Q7Z6J0 Y_RNA.139-201ENST00000363464 102 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 172.9 ms