Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 RNU6-624P-201ENST00000363411 107 ntBASIC-1.99□□□□□ -2.73
CSPG4Q6UVK1 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.99□□□□□ -2.73
CSPG4Q6UVK1 SNORD58A-201ENST00000383875 65 ntBASIC-1.99□□□□□ -2.73
CSPG4Q6UVK1 SNORA41B-201ENST00000384785 128 ntBASIC-1.99□□□□□ -2.73
CSPG4Q6UVK1 SNORD77.2-201ENST00000391045 68 ntBASIC-1.99□□□□□ -2.73
CSPG4Q6UVK1 RNA5SP136-201ENST00000410906 107 ntBASIC-1.99□□□□□ -2.73
CSPG4Q6UVK1 MIR4282-201ENST00000583613 67 ntBASIC-1.99□□□□□ -2.73
CSPG4Q6UVK1 MIR548V-201ENST00000584165 80 ntBASIC-1.99□□□□□ -2.73
CSPG4Q6UVK1 MTND4LP32-201ENST00000636111 270 ntBASIC-1.99□□□□□ -2.73
CSPG4Q6UVK1 Y_RNA.26-201ENST00000362539 101 ntBASIC-1.99□□□□□ -2.73
CSPG4Q6UVK1 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.99□□□□□ -2.73
CSPG4Q6UVK1 RNU6-806P-201ENST00000365147 105 ntBASIC-1.99□□□□□ -2.73
CSPG4Q6UVK1 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.99□□□□□ -2.73
CSPG4Q6UVK1 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.99□□□□□ -2.73
CSPG4Q6UVK1 RNU6-972P-201ENST00000391208 107 ntBASIC-1.99□□□□□ -2.73
CSPG4Q6UVK1 SNORA40.15-201ENST00000516884 107 ntBASIC-1.99□□□□□ -2.73
CSPG4Q6UVK1 MIR4777-201ENST00000583710 86 ntBASIC-1.99□□□□□ -2.73
CSPG4Q6UVK1 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.99□□□□□ -2.73
CSPG4Q6UVK1 U2.14-201ENST00000615943 113 ntBASIC-1.99□□□□□ -2.73
CSPG4Q6UVK1 RNU6-598P-201ENST00000364017 105 ntBASIC-2□□□□□ -2.73
CSPG4Q6UVK1 Y_RNA.264-201ENST00000364665 102 ntBASIC-2□□□□□ -2.73
CSPG4Q6UVK1 MIR1302-11-201ENST00000408051 138 ntBASIC-2□□□□□ -2.73
CSPG4Q6UVK1 MIR1302-9-201ENST00000408365 138 ntBASIC-2□□□□□ -2.73
CSPG4Q6UVK1 MIR1302-10-201ENST00000408734 138 ntBASIC-2□□□□□ -2.73
CSPG4Q6UVK1 MTND2P23-201ENST00000422990 651 ntBASIC-2□□□□□ -2.73
CSPG4Q6UVK1 RNU6-277P-201ENST00000516272 106 ntBASIC-2□□□□□ -2.73
CSPG4Q6UVK1 MIR1302-2-201ENST00000607096 138 ntBASIC-2□□□□□ -2.73
CSPG4Q6UVK1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2□□□□□ -2.73
CSPG4Q6UVK1 RNU6-68P-201ENST00000516576 104 ntBASIC-2□□□□□ -2.73
CSPG4Q6UVK1 MIR4643-201ENST00000577473 78 ntBASIC-2□□□□□ -2.73
CSPG4Q6UVK1 MTND4LP1-201ENST00000446263 157 ntBASIC-2.01□□□□□ -2.73
CSPG4Q6UVK1 RNU6-182P-201ENST00000516970 105 ntBASIC-2.01□□□□□ -2.73
CSPG4Q6UVK1 RNU6-781P-201ENST00000516377 101 ntBASIC-2.01□□□□□ -2.73
CSPG4Q6UVK1 MIR7978-201ENST00000636158 59 ntBASIC-2.01□□□□□ -2.73
CSPG4Q6UVK1 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.02□□□□□ -2.73
CSPG4Q6UVK1 RNU6-450P-201ENST00000364654 107 ntBASIC-2.02□□□□□ -2.73
CSPG4Q6UVK1 Y_RNA.563-201ENST00000384707 108 ntBASIC-2.02□□□□□ -2.73
CSPG4Q6UVK1 Y_RNA.573-201ENST00000384763 105 ntBASIC-2.02□□□□□ -2.73
CSPG4Q6UVK1 AC090971.5-201ENST00000621102 293 ntBASIC-2.02□□□□□ -2.73
CSPG4Q6UVK1 Y_RNA.158-201ENST00000363651 101 ntBASIC-2.02□□□□□ -2.73
CSPG4Q6UVK1 RNU6-326P-201ENST00000365480 107 ntBASIC-2.02□□□□□ -2.73
CSPG4Q6UVK1 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.02□□□□□ -2.73
CSPG4Q6UVK1 RNU6-584P-201ENST00000410350 95 ntBASIC-2.02□□□□□ -2.73
CSPG4Q6UVK1 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-2.02□□□□□ -2.73
CSPG4Q6UVK1 RNU6-345P-201ENST00000517001 107 ntBASIC-2.02□□□□□ -2.73
CSPG4Q6UVK1 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-2.02□□□□□ -2.73
CSPG4Q6UVK1 Y_RNA.95-201ENST00000363079 95 ntBASIC-2.03□□□□□ -2.73
CSPG4Q6UVK1 SNORD115-37-201ENST00000363768 82 ntBASIC-2.03□□□□□ -2.73
CSPG4Q6UVK1 Y_RNA.233-201ENST00000364407 101 ntBASIC-2.03□□□□□ -2.73
CSPG4Q6UVK1 MIR579-201ENST00000385221 98 ntBASIC-2.03□□□□□ -2.73
CSPG4Q6UVK1 RNU6-460P-201ENST00000391158 108 ntBASIC-2.03□□□□□ -2.73
CSPG4Q6UVK1 RNU6-537P-201ENST00000517277 103 ntBASIC-2.03□□□□□ -2.73
CSPG4Q6UVK1 Y_RNA.9-201ENST00000362354 101 ntBASIC-2.03□□□□□ -2.74
CSPG4Q6UVK1 SNORD114-13-201ENST00000364377 74 ntBASIC-2.03□□□□□ -2.74
CSPG4Q6UVK1 Y_RNA.237-201ENST00000364439 102 ntBASIC-2.03□□□□□ -2.74
CSPG4Q6UVK1 Y_RNA.309-201ENST00000365046 111 ntBASIC-2.03□□□□□ -2.74
CSPG4Q6UVK1 RNU6-823P-201ENST00000391042 103 ntBASIC-2.03□□□□□ -2.74
CSPG4Q6UVK1 RNU7-61P-201ENST00000515897 61 ntBASIC-2.03□□□□□ -2.74
CSPG4Q6UVK1 Y_RNA.210-201ENST00000364161 110 ntBASIC-2.04□□□□□ -2.74
CSPG4Q6UVK1 Y_RNA.277-201ENST00000364754 102 ntBASIC-2.04□□□□□ -2.74
CSPG4Q6UVK1 RNU6-1227P-201ENST00000383981 107 ntBASIC-2.04□□□□□ -2.74
CSPG4Q6UVK1 RNU6-813P-201ENST00000384691 107 ntBASIC-2.04□□□□□ -2.74
CSPG4Q6UVK1 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.05□□□□□ -2.74
CSPG4Q6UVK1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-2.05□□□□□ -2.74
CSPG4Q6UVK1 AC113195.1-201ENST00000579952 141 ntBASIC-2.05□□□□□ -2.74
CSPG4Q6UVK1 DNAJC19P2-201ENST00000593340 302 ntBASIC-2.05□□□□□ -2.74
CSPG4Q6UVK1 MIR1263-201ENST00000408324 86 ntBASIC-2.05□□□□□ -2.74
CSPG4Q6UVK1 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-2.05□□□□□ -2.74
CSPG4Q6UVK1 MIR3658-201ENST00000636291 56 ntBASIC-2.05□□□□□ -2.74
CSPG4Q6UVK1 MIR202-201ENST00000362219 110 ntBASIC-2.06□□□□□ -2.74
CSPG4Q6UVK1 MIR519C-201ENST00000385053 87 ntBASIC-2.06□□□□□ -2.74
CSPG4Q6UVK1 RNY4P18-201ENST00000391107 89 ntBASIC-2.06□□□□□ -2.74
CSPG4Q6UVK1 AC069439.1-201ENST00000494739 167 ntBASIC-2.06□□□□□ -2.74
CSPG4Q6UVK1 RNY3P16-201ENST00000516338 101 ntBASIC-2.06□□□□□ -2.74
CSPG4Q6UVK1 RNU6-506P-201ENST00000516553 94 ntBASIC-2.06□□□□□ -2.74
CSPG4Q6UVK1 RNU7-121P-201ENST00000516604 62 ntBASIC-2.06□□□□□ -2.74
CSPG4Q6UVK1 RNA5SP173-201ENST00000364857 136 ntBASIC-2.06□□□□□ -2.74
CSPG4Q6UVK1 MIR1252-201ENST00000408861 65 ntBASIC-2.06□□□□□ -2.74
CSPG4Q6UVK1 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-2.06□□□□□ -2.74
CSPG4Q6UVK1 SNORD127-201ENST00000458892 86 ntBASIC-2.06□□□□□ -2.74
CSPG4Q6UVK1 RNU6-1061P-201ENST00000516530 99 ntBASIC-2.06□□□□□ -2.74
CSPG4Q6UVK1 RNU6-303P-201ENST00000517091 106 ntBASIC-2.06□□□□□ -2.74
CSPG4Q6UVK1 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.06□□□□□ -2.74
CSPG4Q6UVK1 Y_RNA.266-201ENST00000364678 96 ntBASIC-2.07□□□□□ -2.74
CSPG4Q6UVK1 Y_RNA.455-201ENST00000384230 98 ntBASIC-2.07□□□□□ -2.74
CSPG4Q6UVK1 RNU6-530P-201ENST00000391180 107 ntBASIC-2.07□□□□□ -2.74
CSPG4Q6UVK1 MIR1236-201ENST00000408340 102 ntBASIC-2.07□□□□□ -2.74
CSPG4Q6UVK1 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.07□□□□□ -2.74
CSPG4Q6UVK1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-2.07□□□□□ -2.74
CSPG4Q6UVK1 MIR369-201ENST00000362155 70 ntBASIC-2.08□□□□□ -2.74
CSPG4Q6UVK1 RNU6-800P-201ENST00000384473 103 ntBASIC-2.08□□□□□ -2.74
CSPG4Q6UVK1 RNU6-971P-201ENST00000516920 106 ntBASIC-2.08□□□□□ -2.74
CSPG4Q6UVK1 Y_RNA.279-201ENST00000364763 95 ntBASIC-2.08□□□□□ -2.74
CSPG4Q6UVK1 MIR4679-2-201ENST00000578358 77 ntBASIC-2.08□□□□□ -2.74
CSPG4Q6UVK1 MIR5009-201ENST00000578736 100 ntBASIC-2.08□□□□□ -2.74
CSPG4Q6UVK1 MIR4426-201ENST00000640330 63 ntBASIC-2.08□□□□□ -2.74
CSPG4Q6UVK1 AL450471.1-201ENST00000447509 127 ntBASIC-2.09□□□□□ -2.74
CSPG4Q6UVK1 RNU7-153P-201ENST00000516455 62 ntBASIC-2.09□□□□□ -2.74
CSPG4Q6UVK1 AL731768.1-201ENST00000603124 139 ntBASIC-2.09□□□□□ -2.74
CSPG4Q6UVK1 AC078883.4-201ENST00000623218 367 ntBASIC-2.09□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 156.4 ms