Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 U6.96-201ENST00000636425 70 ntBASIC-0.01□□□□□ -2.41
ATP2B3Q16720 RNU6-24P-201ENST00000384440 107 ntBASIC-0.02□□□□□ -2.41
ATP2B3Q16720 SNORD45A-201ENST00000384512 84 ntBASIC-0.02□□□□□ -2.41
ATP2B3Q16720 AC244250.2-201ENST00000418731 148 ntBASIC-0.02□□□□□ -2.41
ATP2B3Q16720 MIR4290-201ENST00000583807 95 ntBASIC-0.02□□□□□ -2.41
ATP2B3Q16720 MIR6773-201ENST00000612812 74 ntBASIC-0.02□□□□□ -2.41
ATP2B3Q16720 MIR148A-201ENST00000362215 68 ntBASIC-0.03□□□□□ -2.41
ATP2B3Q16720 RNU6-502P-201ENST00000362419 108 ntBASIC-0.03□□□□□ -2.41
ATP2B3Q16720 SNORD115-22-201ENST00000364456 82 ntBASIC-0.03□□□□□ -2.41
ATP2B3Q16720 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.03□□□□□ -2.41
ATP2B3Q16720 RNU6-656P-201ENST00000516785 107 ntBASIC-0.03□□□□□ -2.41
ATP2B3Q16720 MIR6739-201ENST00000622461 75 ntBASIC-0.03□□□□□ -2.41
ATP2B3Q16720 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.03□□□□□ -2.41
ATP2B3Q16720 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.04□□□□□ -2.42
ATP2B3Q16720 RNU6-645P-201ENST00000364649 106 ntBASIC-0.04□□□□□ -2.42
ATP2B3Q16720 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.04□□□□□ -2.42
ATP2B3Q16720 U7.4-201ENST00000614961 63 ntBASIC-0.04□□□□□ -2.42
ATP2B3Q16720 MIR371B-201ENST00000638082 66 ntBASIC-0.04□□□□□ -2.42
ATP2B3Q16720 MIR521-2-201ENST00000384818 87 ntBASIC-0.05□□□□□ -2.42
ATP2B3Q16720 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.05□□□□□ -2.42
ATP2B3Q16720 uc_338.36-201ENST00000622331 158 ntBASIC-0.05□□□□□ -2.42
ATP2B3Q16720 MIR1295B-201ENST00000636144 60 ntBASIC-0.05□□□□□ -2.42
ATP2B3Q16720 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.06□□□□□ -2.42
ATP2B3Q16720 RNU6-455P-201ENST00000384681 107 ntBASIC-0.06□□□□□ -2.42
ATP2B3Q16720 SNORD2-201ENST00000459163 69 ntBASIC-0.06□□□□□ -2.42
ATP2B3Q16720 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.07□□□□□ -2.42
ATP2B3Q16720 RNA5SP257-201ENST00000363023 116 ntBASIC-0.07□□□□□ -2.42
ATP2B3Q16720 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.07□□□□□ -2.42
ATP2B3Q16720 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.07□□□□□ -2.42
ATP2B3Q16720 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.07□□□□□ -2.42
ATP2B3Q16720 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
ATP2B3Q16720 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.07□□□□□ -2.42
ATP2B3Q16720 MIR9-2-201ENST00000384838 87 ntBASIC-0.08□□□□□ -2.42
ATP2B3Q16720 MIRLET7B-201ENST00000385140 83 ntBASIC-0.08□□□□□ -2.42
ATP2B3Q16720 AC104692.1-201ENST00000472406 90 ntBASIC-0.08□□□□□ -2.42
ATP2B3Q16720 SNORD115-31-201ENST00000365318 82 ntBASIC-0.09□□□□□ -2.42
ATP2B3Q16720 MIR154-201ENST00000385243 84 ntBASIC-0.09□□□□□ -2.42
ATP2B3Q16720 RNU6-587P-201ENST00000391282 106 ntBASIC-0.09□□□□□ -2.42
ATP2B3Q16720 RNU6-687P-201ENST00000516443 89 ntBASIC-0.09□□□□□ -2.42
ATP2B3Q16720 RNU6-881P-201ENST00000516813 102 ntBASIC-0.09□□□□□ -2.42
ATP2B3Q16720 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.09□□□□□ -2.42
ATP2B3Q16720 SNORD113.1-201ENST00000363280 73 ntBASIC-0.1□□□□□ -2.43
ATP2B3Q16720 CYP3A54P-201ENST00000566950 75 ntBASIC-0.1□□□□□ -2.43
ATP2B3Q16720 MIR655-201ENST00000362159 97 ntBASIC-0.11□□□□□ -2.43
ATP2B3Q16720 SNORD49B-201ENST00000365172 72 ntBASIC-0.12□□□□□ -2.43
ATP2B3Q16720 RNU6-302P-201ENST00000365249 107 ntBASIC-0.12□□□□□ -2.43
ATP2B3Q16720 RNU6-411P-201ENST00000384451 107 ntBASIC-0.12□□□□□ -2.43
ATP2B3Q16720 MIR1255B2-201ENST00000408618 67 ntBASIC-0.12□□□□□ -2.43
ATP2B3Q16720 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.12□□□□□ -2.43
ATP2B3Q16720 RNU6-523P-201ENST00000516304 54 ntBASIC-0.12□□□□□ -2.43
ATP2B3Q16720 SNORA32.1-201ENST00000364514 115 ntBASIC-0.13□□□□□ -2.43
ATP2B3Q16720 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.13□□□□□ -2.43
ATP2B3Q16720 MIR548C-201ENST00000384815 97 ntBASIC-0.13□□□□□ -2.43
ATP2B3Q16720 MIR8053-201ENST00000613344 75 ntBASIC-0.13□□□□□ -2.43
ATP2B3Q16720 SNORD114-12-201ENST00000365400 75 ntBASIC-0.14□□□□□ -2.43
ATP2B3Q16720 RNU6-46P-201ENST00000383860 107 ntBASIC-0.16□□□□□ -2.44
ATP2B3Q16720 RNU7-55P-201ENST00000459426 62 ntBASIC-0.16□□□□□ -2.44
ATP2B3Q16720 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.16□□□□□ -2.44
ATP2B3Q16720 RNU6-776P-201ENST00000364403 104 ntBASIC-0.17□□□□□ -2.44
ATP2B3Q16720 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.17□□□□□ -2.44
ATP2B3Q16720 RNU6-900P-201ENST00000384498 102 ntBASIC-0.17□□□□□ -2.44
ATP2B3Q16720 SNORD56B-201ENST00000384713 71 ntBASIC-0.17□□□□□ -2.44
ATP2B3Q16720 AL445193.1-201ENST00000441183 141 ntBASIC-0.17□□□□□ -2.44
ATP2B3Q16720 MIR5704-201ENST00000584029 77 ntBASIC-0.17□□□□□ -2.44
ATP2B3Q16720 U2.7-201ENST00000619197 100 ntBASIC-0.17□□□□□ -2.44
ATP2B3Q16720 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.18□□□□□ -2.44
ATP2B3Q16720 AL391099.1-201ENST00000624635 187 ntBASIC-0.18□□□□□ -2.44
ATP2B3Q16720 RNU6-895P-201ENST00000384125 103 ntBASIC-0.19□□□□□ -2.44
ATP2B3Q16720 SNORD115-23-201ENST00000364461 82 ntBASIC-0.2□□□□□ -2.44
ATP2B3Q16720 SNORD116-24-201ENST00000384549 92 ntBASIC-0.2□□□□□ -2.44
ATP2B3Q16720 RNU6-901P-201ENST00000384593 106 ntBASIC-0.2□□□□□ -2.44
ATP2B3Q16720 RNU6-518P-201ENST00000516056 96 ntBASIC-0.2□□□□□ -2.44
ATP2B3Q16720 snoR1.1-201ENST00000628177 80 ntBASIC-0.2□□□□□ -2.44
ATP2B3Q16720 MIR519A2-201ENST00000384990 87 ntBASIC-0.21□□□□□ -2.44
ATP2B3Q16720 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.21□□□□□ -2.44
ATP2B3Q16720 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.21□□□□□ -2.44
ATP2B3Q16720 RNU6-638P-201ENST00000516582 104 ntBASIC-0.21□□□□□ -2.44
ATP2B3Q16720 MIR4432-201ENST00000581823 84 ntBASIC-0.21□□□□□ -2.44
ATP2B3Q16720 RNU6-668P-201ENST00000364180 107 ntBASIC-0.22□□□□□ -2.44
ATP2B3Q16720 RNU6-540P-201ENST00000384622 101 ntBASIC-0.22□□□□□ -2.44
ATP2B3Q16720 MTND4LP1-201ENST00000446263 157 ntBASIC-0.22□□□□□ -2.44
ATP2B3Q16720 MIR8068-201ENST00000618032 68 ntBASIC-0.22□□□□□ -2.44
ATP2B3Q16720 MIR4662A-201ENST00000637499 67 ntBASIC-0.22□□□□□ -2.44
ATP2B3Q16720 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.23□□□□□ -2.45
ATP2B3Q16720 RNU6-973P-201ENST00000364690 107 ntBASIC-0.23□□□□□ -2.45
ATP2B3Q16720 RNU6-634P-201ENST00000459134 106 ntBASIC-0.23□□□□□ -2.45
ATP2B3Q16720 MIR548V-201ENST00000584165 80 ntBASIC-0.23□□□□□ -2.45
ATP2B3Q16720 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.24□□□□□ -2.45
ATP2B3Q16720 AL353803.5-201ENST00000599815 141 ntBASIC-0.24□□□□□ -2.45
ATP2B3Q16720 AL590491.3-201ENST00000610731 82 ntBASIC-0.24□□□□□ -2.45
ATP2B3Q16720 SNORA18.1-201ENST00000363418 128 ntBASIC-0.25□□□□□ -2.45
ATP2B3Q16720 AC096531.1-201ENST00000419107 107 ntBASIC-0.25□□□□□ -2.45
ATP2B3Q16720 SNORD4A-201ENST00000459174 72 ntBASIC-0.25□□□□□ -2.45
ATP2B3Q16720 MIR548AG1-201ENST00000579932 66 ntBASIC-0.25□□□□□ -2.45
ATP2B3Q16720 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.26□□□□□ -2.45
ATP2B3Q16720 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
ATP2B3Q16720 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.26□□□□□ -2.45
ATP2B3Q16720 RNU7-174P-201ENST00000516248 59 ntBASIC-0.27□□□□□ -2.45
ATP2B3Q16720 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.28□□□□□ -2.45
ATP2B3Q16720 MIR4280-201ENST00000582178 76 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms