Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 MIR4432-201ENST00000581823 84 ntBASIC1.54□□□□□ -2.16
NFX1Q12986 MIR4452-201ENST00000583004 71 ntBASIC1.54□□□□□ -2.16
NFX1Q12986 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.54□□□□□ -2.16
NFX1Q12986 RNU6-502P-201ENST00000362419 108 ntBASIC1.53□□□□□ -2.16
NFX1Q12986 MIR3170-201ENST00000582699 77 ntBASIC1.53□□□□□ -2.16
NFX1Q12986 SNORA70.25-201ENST00000612741 95 ntBASIC1.53□□□□□ -2.16
NFX1Q12986 SNORD114-29-201ENST00000364819 70 ntBASIC1.52□□□□□ -2.17
NFX1Q12986 MIR573-201ENST00000384964 99 ntBASIC1.52□□□□□ -2.17
NFX1Q12986 RNU6-955P-201ENST00000410497 104 ntBASIC1.52□□□□□ -2.17
NFX1Q12986 RNU7-88P-201ENST00000458752 63 ntBASIC1.52□□□□□ -2.17
NFX1Q12986 Y_RNA.698-201ENST00000516798 118 ntBASIC1.51□□□□□ -2.17
NFX1Q12986 RNU6-1174P-201ENST00000517278 101 ntBASIC1.51□□□□□ -2.17
NFX1Q12986 MIR4426-201ENST00000640330 63 ntBASIC1.51□□□□□ -2.17
NFX1Q12986 MIR19B1-201ENST00000384829 87 ntBASIC1.5□□□□□ -2.17
NFX1Q12986 RNA5SP268-201ENST00000516828 124 ntBASIC1.5□□□□□ -2.17
NFX1Q12986 SNORA36.1-201ENST00000363424 132 ntBASIC1.49□□□□□ -2.17
NFX1Q12986 MIR618-201ENST00000385287 98 ntBASIC1.49□□□□□ -2.17
NFX1Q12986 MIR1468-201ENST00000410600 86 ntBASIC1.49□□□□□ -2.17
NFX1Q12986 RNA5SP61-201ENST00000516453 100 ntBASIC1.49□□□□□ -2.17
NFX1Q12986 MIR6078-201ENST00000611069 100 ntBASIC1.49□□□□□ -2.17
NFX1Q12986 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
NFX1Q12986 MIR150-201ENST00000385048 84 ntBASIC1.48□□□□□ -2.17
NFX1Q12986 RNA5SP404-201ENST00000517118 132 ntBASIC1.48□□□□□ -2.17
NFX1Q12986 RNU6-1111P-201ENST00000391118 107 ntBASIC1.47□□□□□ -2.17
NFX1Q12986 MIR7107-201ENST00000611489 80 ntBASIC1.47□□□□□ -2.17
NFX1Q12986 RNU6-939P-201ENST00000384634 107 ntBASIC1.46□□□□□ -2.18
NFX1Q12986 MIR200A-201ENST00000384875 90 ntBASIC1.46□□□□□ -2.18
NFX1Q12986 FABP5P4-201ENST00000437203 171 ntBASIC1.46□□□□□ -2.18
NFX1Q12986 RNA5SP102-201ENST00000516865 106 ntBASIC1.46□□□□□ -2.18
NFX1Q12986 RNU7-188P-201ENST00000517063 64 ntBASIC1.46□□□□□ -2.18
NFX1Q12986 MIR5706-201ENST00000579841 80 ntBASIC1.46□□□□□ -2.18
NFX1Q12986 SNORD115-23-201ENST00000364461 82 ntBASIC1.45□□□□□ -2.18
NFX1Q12986 SNORD124-201ENST00000459577 104 ntBASIC1.45□□□□□ -2.18
NFX1Q12986 RNA5SP480-201ENST00000516840 109 ntBASIC1.45□□□□□ -2.18
NFX1Q12986 RNU6-175P-201ENST00000516896 107 ntBASIC1.45□□□□□ -2.18
NFX1Q12986 MIR4752-201ENST00000579672 72 ntBASIC1.45□□□□□ -2.18
NFX1Q12986 RNU1-124P-201ENST00000363861 145 ntBASIC1.44□□□□□ -2.18
NFX1Q12986 AC104408.1-201ENST00000605241 170 ntBASIC1.44□□□□□ -2.18
NFX1Q12986 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
NFX1Q12986 RNU6-1036P-201ENST00000383959 104 ntBASIC1.42□□□□□ -2.18
NFX1Q12986 SNORD114-24-201ENST00000365029 72 ntBASIC1.41□□□□□ -2.18
NFX1Q12986 Y_RNA.540-201ENST00000384638 111 ntBASIC1.41□□□□□ -2.18
NFX1Q12986 RNU6-258P-201ENST00000390884 101 ntBASIC1.41□□□□□ -2.18
NFX1Q12986 MIR3660-201ENST00000584845 100 ntBASIC1.41□□□□□ -2.18
NFX1Q12986 RNU1-29P-201ENST00000606574 126 ntBASIC1.41□□□□□ -2.18
NFX1Q12986 RNU6-300P-201ENST00000459080 104 ntBASIC1.4□□□□□ -2.19
NFX1Q12986 MIR6888-201ENST00000621977 67 ntBASIC1.4□□□□□ -2.19
NFX1Q12986 MIR18A-201ENST00000362310 71 ntBASIC1.39□□□□□ -2.19
NFX1Q12986 SNORA27.2-201ENST00000363365 126 ntBASIC1.39□□□□□ -2.19
NFX1Q12986 RNU6-361P-201ENST00000364454 107 ntBASIC1.39□□□□□ -2.19
NFX1Q12986 SNORD114-22-201ENST00000365423 72 ntBASIC1.39□□□□□ -2.19
NFX1Q12986 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.39□□□□□ -2.19
NFX1Q12986 RNU6-1238P-201ENST00000517215 102 ntBASIC1.39□□□□□ -2.19
NFX1Q12986 RNY1P9-201ENST00000532431 109 ntBASIC1.39□□□□□ -2.19
NFX1Q12986 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
NFX1Q12986 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
NFX1Q12986 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.38□□□□□ -2.19
NFX1Q12986 Y_RNA.699-201ENST00000516803 93 ntBASIC1.38□□□□□ -2.19
NFX1Q12986 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.37□□□□□ -2.19
NFX1Q12986 MIR4464-201ENST00000580818 92 ntBASIC1.37□□□□□ -2.19
NFX1Q12986 AL445584.3-201ENST00000617173 78 ntBASIC1.37□□□□□ -2.19
NFX1Q12986 snoR1.1-201ENST00000628177 80 ntBASIC1.37□□□□□ -2.19
NFX1Q12986 RNU6-1091P-201ENST00000363945 107 ntBASIC1.36□□□□□ -2.19
NFX1Q12986 MIR6515-201ENST00000619843 57 ntBASIC1.36□□□□□ -2.19
NFX1Q12986 MIR548T-201ENST00000408369 74 ntBASIC1.35□□□□□ -2.19
NFX1Q12986 Y_RNA.613-201ENST00000410726 97 ntBASIC1.35□□□□□ -2.19
NFX1Q12986 U7.6-201ENST00000610841 64 ntBASIC1.35□□□□□ -2.19
NFX1Q12986 MIR96-201ENST00000362288 78 ntBASIC1.34□□□□□ -2.19
NFX1Q12986 RNU4-45P-201ENST00000365469 141 ntBASIC1.34□□□□□ -2.19
NFX1Q12986 RNU6-176P-201ENST00000517196 105 ntBASIC1.34□□□□□ -2.19
NFX1Q12986 MIR202-201ENST00000362219 110 ntBASIC1.33□□□□□ -2.2
NFX1Q12986 SNORD114-26-201ENST00000363543 72 ntBASIC1.33□□□□□ -2.2
NFX1Q12986 SNORD114-27-201ENST00000363766 70 ntBASIC1.32□□□□□ -2.2
NFX1Q12986 MIR520D-201ENST00000385002 87 ntBASIC1.32□□□□□ -2.2
NFX1Q12986 RNA5SP255-201ENST00000516370 107 ntBASIC1.32□□□□□ -2.2
NFX1Q12986 AC011195.1-201ENST00000578177 177 ntBASIC1.32□□□□□ -2.2
NFX1Q12986 SNORA62.4-201ENST00000365504 151 ntBASIC1.31□□□□□ -2.2
NFX1Q12986 SNORA17.4-201ENST00000391287 132 ntBASIC1.31□□□□□ -2.2
NFX1Q12986 RNU6-732P-201ENST00000516033 103 ntBASIC1.31□□□□□ -2.2
NFX1Q12986 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
NFX1Q12986 MIR548Q-201ENST00000408404 100 ntBASIC1.3□□□□□ -2.2
NFX1Q12986 RNA5SP169-201ENST00000517268 117 ntBASIC1.3□□□□□ -2.2
NFX1Q12986 AP000676.1-201ENST00000533307 52 ntBASIC1.3□□□□□ -2.2
NFX1Q12986 AC069271.1-201ENST00000445577 156 ntBASIC1.29□□□□□ -2.2
NFX1Q12986 MIR4677-201ENST00000584153 80 ntBASIC1.29□□□□□ -2.2
NFX1Q12986 AC022709.1-201ENST00000615967 87 ntBASIC1.29□□□□□ -2.2
NFX1Q12986 AC084368.1-201ENST00000620935 65 ntBASIC1.29□□□□□ -2.2
NFX1Q12986 SNORA2A-201ENST00000383885 135 ntBASIC1.28□□□□□ -2.2
NFX1Q12986 MIR4295-201ENST00000585286 85 ntBASIC1.28□□□□□ -2.2
NFX1Q12986 RN7SL660P-201ENST00000614852 299 ntBASIC1.28□□□□□ -2.2
NFX1Q12986 Y_RNA.519-201ENST00000384553 102 ntBASIC1.27□□□□□ -2.21
NFX1Q12986 MIR598-201ENST00000384868 97 ntBASIC1.27□□□□□ -2.21
NFX1Q12986 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.27□□□□□ -2.21
NFX1Q12986 SNORD99-201ENST00000408612 74 ntBASIC1.27□□□□□ -2.21
NFX1Q12986 AC087343.1-201ENST00000477341 475 ntBASIC1.27□□□□□ -2.21
NFX1Q12986 RNU6-229P-201ENST00000516614 102 ntBASIC1.27□□□□□ -2.21
NFX1Q12986 MIR151B-201ENST00000584249 96 ntBASIC1.27□□□□□ -2.21
NFX1Q12986 MIR6779-201ENST00000617283 64 ntBASIC1.27□□□□□ -2.21
NFX1Q12986 RNY3P8-201ENST00000411366 126 ntBASIC1.26□□□□□ -2.21
NFX1Q12986 MIR4661-201ENST00000582720 75 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms