Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 MIR106A-201ENST00000384870 81 ntBASIC0.19□□□□□ -2.38
ERVFC1-1P60608 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.19□□□□□ -2.38
ERVFC1-1P60608 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.19□□□□□ -2.38
ERVFC1-1P60608 RNU6-663P-201ENST00000391105 106 ntBASIC0.18□□□□□ -2.38
ERVFC1-1P60608 RNU6-337P-201ENST00000391243 106 ntBASIC0.18□□□□□ -2.38
ERVFC1-1P60608 SNORD2-201ENST00000459163 69 ntBASIC0.18□□□□□ -2.38
ERVFC1-1P60608 AC023932.2-201ENST00000603176 175 ntBASIC0.18□□□□□ -2.38
ERVFC1-1P60608 AC104408.1-201ENST00000605241 170 ntBASIC0.18□□□□□ -2.38
ERVFC1-1P60608 SNORA42.1-201ENST00000363515 137 ntBASIC0.17□□□□□ -2.38
ERVFC1-1P60608 SNORD30.1-201ENST00000391309 70 ntBASIC0.17□□□□□ -2.38
ERVFC1-1P60608 AC114801.3-201ENST00000510231 177 ntBASIC0.17□□□□□ -2.38
ERVFC1-1P60608 U6.96-201ENST00000636425 70 ntBASIC0.17□□□□□ -2.38
ERVFC1-1P60608 MIR593-201ENST00000384856 100 ntBASIC0.16□□□□□ -2.38
ERVFC1-1P60608 RNA5SP163-201ENST00000410304 99 ntBASIC0.16□□□□□ -2.38
ERVFC1-1P60608 MTND4LP1-201ENST00000446263 157 ntBASIC0.16□□□□□ -2.38
ERVFC1-1P60608 RNU6-180P-201ENST00000516697 61 ntBASIC0.16□□□□□ -2.38
ERVFC1-1P60608 MIR6773-201ENST00000612812 74 ntBASIC0.16□□□□□ -2.38
ERVFC1-1P60608 AL109933.3-201ENST00000619095 188 ntBASIC0.16□□□□□ -2.38
ERVFC1-1P60608 MIR6514-201ENST00000622549 70 ntBASIC0.16□□□□□ -2.38
ERVFC1-1P60608 RNU6-502P-201ENST00000362419 108 ntBASIC0.15□□□□□ -2.39
ERVFC1-1P60608 SNORD115-25-201ENST00000362619 82 ntBASIC0.15□□□□□ -2.39
ERVFC1-1P60608 RNA5SP214-201ENST00000363378 118 ntBASIC0.15□□□□□ -2.39
ERVFC1-1P60608 RNU6-649P-201ENST00000384463 107 ntBASIC0.15□□□□□ -2.39
ERVFC1-1P60608 MIR1197-201ENST00000408818 88 ntBASIC0.15□□□□□ -2.39
ERVFC1-1P60608 U2.7-201ENST00000619197 100 ntBASIC0.15□□□□□ -2.39
ERVFC1-1P60608 RNU6-668P-201ENST00000364180 107 ntBASIC0.14□□□□□ -2.39
ERVFC1-1P60608 SNORD114-9-201ENST00000364370 72 ntBASIC0.14□□□□□ -2.39
ERVFC1-1P60608 RNA5SP63-201ENST00000391225 112 ntBASIC0.14□□□□□ -2.39
ERVFC1-1P60608 RNU6-1089P-201ENST00000516473 104 ntBASIC0.14□□□□□ -2.39
ERVFC1-1P60608 RNU6-539P-201ENST00000516665 103 ntBASIC0.14□□□□□ -2.39
ERVFC1-1P60608 CR383656.4-201ENST00000546909 122 ntBASIC0.14□□□□□ -2.39
ERVFC1-1P60608 CYP3A54P-201ENST00000566950 75 ntBASIC0.14□□□□□ -2.39
ERVFC1-1P60608 U6.111-201ENST00000636093 83 ntBASIC0.14□□□□□ -2.39
ERVFC1-1P60608 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.13□□□□□ -2.39
ERVFC1-1P60608 RNA5SP98-201ENST00000363158 137 ntBASIC0.13□□□□□ -2.39
ERVFC1-1P60608 Y_RNA.443-201ENST00000384135 111 ntBASIC0.13□□□□□ -2.39
ERVFC1-1P60608 MIR145-201ENST00000384967 88 ntBASIC0.13□□□□□ -2.39
ERVFC1-1P60608 MIR610-201ENST00000385139 96 ntBASIC0.13□□□□□ -2.39
ERVFC1-1P60608 MIRLET7B-201ENST00000385140 83 ntBASIC0.13□□□□□ -2.39
ERVFC1-1P60608 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
ERVFC1-1P60608 AP000676.1-201ENST00000533307 52 ntBASIC0.13□□□□□ -2.39
ERVFC1-1P60608 RNU6-630P-201ENST00000391258 106 ntBASIC0.12□□□□□ -2.39
ERVFC1-1P60608 MIR892B-201ENST00000401279 77 ntBASIC0.12□□□□□ -2.39
ERVFC1-1P60608 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
ERVFC1-1P60608 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.12□□□□□ -2.39
ERVFC1-1P60608 MIR4743-201ENST00000584576 69 ntBASIC0.12□□□□□ -2.39
ERVFC1-1P60608 SNORD114-5-201ENST00000362928 70 ntBASIC0.11□□□□□ -2.39
ERVFC1-1P60608 RNA5SP257-201ENST00000363023 116 ntBASIC0.11□□□□□ -2.39
ERVFC1-1P60608 Y_RNA.386-201ENST00000383913 105 ntBASIC0.11□□□□□ -2.39
ERVFC1-1P60608 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.11□□□□□ -2.39
ERVFC1-1P60608 RNU7-165P-201ENST00000458864 60 ntBASIC0.11□□□□□ -2.39
ERVFC1-1P60608 AC139453.2-201ENST00000487255 133 ntBASIC0.11□□□□□ -2.39
ERVFC1-1P60608 AC005520.4-201ENST00000604337 90 ntBASIC0.11□□□□□ -2.39
ERVFC1-1P60608 MIR6507-201ENST00000613630 70 ntBASIC0.11□□□□□ -2.39
ERVFC1-1P60608 MIR148A-201ENST00000362215 68 ntBASIC0.1□□□□□ -2.39
ERVFC1-1P60608 Y_RNA.375-201ENST00000365625 101 ntBASIC0.1□□□□□ -2.39
ERVFC1-1P60608 MIR1255B2-201ENST00000408618 67 ntBASIC0.1□□□□□ -2.39
ERVFC1-1P60608 RNU7-174P-201ENST00000516248 59 ntBASIC0.1□□□□□ -2.39
ERVFC1-1P60608 SNORA25.4-201ENST00000363666 124 ntBASIC0.09□□□□□ -2.4
ERVFC1-1P60608 RNU6-800P-201ENST00000384473 103 ntBASIC0.09□□□□□ -2.4
ERVFC1-1P60608 MIR548C-201ENST00000384815 97 ntBASIC0.09□□□□□ -2.4
ERVFC1-1P60608 Y_RNA.30-201ENST00000362572 97 ntBASIC0.08□□□□□ -2.4
ERVFC1-1P60608 RNA5SP215-201ENST00000363440 122 ntBASIC0.08□□□□□ -2.4
ERVFC1-1P60608 RNU7-159P-201ENST00000459284 62 ntBASIC0.08□□□□□ -2.4
ERVFC1-1P60608 SNORD115-23-201ENST00000364461 82 ntBASIC0.06□□□□□ -2.4
ERVFC1-1P60608 MIR9-2-201ENST00000384838 87 ntBASIC0.06□□□□□ -2.4
ERVFC1-1P60608 MIR519A2-201ENST00000384990 87 ntBASIC0.06□□□□□ -2.4
ERVFC1-1P60608 AC244250.2-201ENST00000418731 148 ntBASIC0.06□□□□□ -2.4
ERVFC1-1P60608 RNU7-55P-201ENST00000459426 62 ntBASIC0.06□□□□□ -2.4
ERVFC1-1P60608 MIR548V-201ENST00000584165 80 ntBASIC0.06□□□□□ -2.4
ERVFC1-1P60608 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
ERVFC1-1P60608 RNU6-929P-201ENST00000384429 107 ntBASIC0.05□□□□□ -2.4
ERVFC1-1P60608 RNU6-455P-201ENST00000384681 107 ntBASIC0.05□□□□□ -2.4
ERVFC1-1P60608 MIR517B-201ENST00000385102 67 ntBASIC0.05□□□□□ -2.4
ERVFC1-1P60608 AL021921.1-201ENST00000442774 93 ntBASIC0.05□□□□□ -2.4
ERVFC1-1P60608 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.05□□□□□ -2.4
ERVFC1-1P60608 RNU6-518P-201ENST00000516056 96 ntBASIC0.05□□□□□ -2.4
ERVFC1-1P60608 MIR4290-201ENST00000583807 95 ntBASIC0.05□□□□□ -2.4
ERVFC1-1P60608 U4.4-201ENST00000620626 117 ntBASIC0.05□□□□□ -2.4
ERVFC1-1P60608 MIR655-201ENST00000362159 97 ntBASIC0.04□□□□□ -2.4
ERVFC1-1P60608 RNU6-698P-201ENST00000363523 107 ntBASIC0.04□□□□□ -2.4
ERVFC1-1P60608 RNU6-34P-201ENST00000364874 107 ntBASIC0.04□□□□□ -2.4
ERVFC1-1P60608 Y_RNA.374-201ENST00000365606 101 ntBASIC0.04□□□□□ -2.4
ERVFC1-1P60608 MIR630-201ENST00000384957 97 ntBASIC0.04□□□□□ -2.4
ERVFC1-1P60608 RNU6-542P-201ENST00000516405 103 ntBASIC0.04□□□□□ -2.4
ERVFC1-1P60608 RNU6-590P-201ENST00000365039 107 ntBASIC0.03□□□□□ -2.4
ERVFC1-1P60608 RNU6-900P-201ENST00000384498 102 ntBASIC0.03□□□□□ -2.4
ERVFC1-1P60608 RNU6-1246P-201ENST00000391064 107 ntBASIC0.03□□□□□ -2.4
ERVFC1-1P60608 MIR548AG1-201ENST00000579932 66 ntBASIC0.03□□□□□ -2.4
ERVFC1-1P60608 MIR6718-201ENST00000616153 80 ntBASIC0.03□□□□□ -2.4
ERVFC1-1P60608 uc_338.36-201ENST00000622331 158 ntBASIC0.03□□□□□ -2.4
ERVFC1-1P60608 MIR371B-201ENST00000638082 66 ntBASIC0.03□□□□□ -2.4
ERVFC1-1P60608 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.02□□□□□ -2.41
ERVFC1-1P60608 RNU7-154P-201ENST00000516194 62 ntBASIC0.02□□□□□ -2.41
ERVFC1-1P60608 RNA5SP470-201ENST00000516463 106 ntBASIC0.02□□□□□ -2.41
ERVFC1-1P60608 MIR4511-201ENST00000582784 87 ntBASIC0.02□□□□□ -2.41
ERVFC1-1P60608 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
ERVFC1-1P60608 Y_RNA.246-201ENST00000364495 108 ntBASIC0.01□□□□□ -2.41
ERVFC1-1P60608 Y_RNA.325-201ENST00000365171 122 ntBASIC0.01□□□□□ -2.41
ERVFC1-1P60608 MIR5190-201ENST00000581537 80 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 7.5 ms