Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RNU6-824P-201ENST00000363724 104 ntBASIC-1.25□□□□□ -2.61
RHBDL3P58872 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.25□□□□□ -2.61
RHBDL3P58872 SNORA62.4-201ENST00000365504 151 ntBASIC-1.25□□□□□ -2.61
RHBDL3P58872 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.25□□□□□ -2.61
RHBDL3P58872 MIR4499-201ENST00000584834 69 ntBASIC-1.25□□□□□ -2.61
RHBDL3P58872 U6.81-201ENST00000612550 106 ntBASIC-1.25□□□□□ -2.61
RHBDL3P58872 MIR3910-1-201ENST00000580936 111 ntBASIC-1.26□□□□□ -2.61
RHBDL3P58872 MTATP8P2-201ENST00000435212 202 ntBASIC-1.27□□□□□ -2.61
RHBDL3P58872 AL450471.1-201ENST00000447509 127 ntBASIC-1.27□□□□□ -2.61
RHBDL3P58872 RNU6-752P-201ENST00000516376 102 ntBASIC-1.27□□□□□ -2.61
RHBDL3P58872 YWHAEP3-201ENST00000582767 121 ntBASIC-1.27□□□□□ -2.61
RHBDL3P58872 MIR124-2-201ENST00000385081 109 ntBASIC-1.28□□□□□ -2.61
RHBDL3P58872 RNU2-51P-201ENST00000410708 197 ntBASIC-1.28□□□□□ -2.61
RHBDL3P58872 uc_338.19-201ENST00000616808 99 ntBASIC-1.28□□□□□ -2.61
RHBDL3P58872 snoU13.17-201ENST00000458802 104 ntBASIC-1.29□□□□□ -2.62
RHBDL3P58872 MIR519C-201ENST00000385053 87 ntBASIC-1.3□□□□□ -2.62
RHBDL3P58872 RNA5SP470-201ENST00000516463 106 ntBASIC-1.3□□□□□ -2.62
RHBDL3P58872 MIR378F-201ENST00000578143 78 ntBASIC-1.3□□□□□ -2.62
RHBDL3P58872 RNU6-208P-201ENST00000362431 107 ntBASIC-1.31□□□□□ -2.62
RHBDL3P58872 SNORD115-37-201ENST00000363768 82 ntBASIC-1.31□□□□□ -2.62
RHBDL3P58872 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.31□□□□□ -2.62
RHBDL3P58872 RNU6-431P-201ENST00000383874 107 ntBASIC-1.31□□□□□ -2.62
RHBDL3P58872 RNU6-681P-201ENST00000364012 104 ntBASIC-1.32□□□□□ -2.62
RHBDL3P58872 MIR147A-201ENST00000385079 72 ntBASIC-1.32□□□□□ -2.62
RHBDL3P58872 SNORD64-201ENST00000386683 67 ntBASIC-1.32□□□□□ -2.62
RHBDL3P58872 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.32□□□□□ -2.62
RHBDL3P58872 MIR3657-201ENST00000584818 117 ntBASIC-1.32□□□□□ -2.62
RHBDL3P58872 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.33□□□□□ -2.62
RHBDL3P58872 RNU6-24P-201ENST00000384440 107 ntBASIC-1.33□□□□□ -2.62
RHBDL3P58872 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.33□□□□□ -2.62
RHBDL3P58872 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.33□□□□□ -2.62
RHBDL3P58872 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.33□□□□□ -2.62
RHBDL3P58872 RNA5SP147-201ENST00000516493 109 ntBASIC-1.34□□□□□ -2.62
RHBDL3P58872 AC090617.8-201ENST00000623339 167 ntBASIC-1.34□□□□□ -2.62
RHBDL3P58872 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.35□□□□□ -2.63
RHBDL3P58872 SCARNA18B-201ENST00000458806 135 ntBASIC-1.35□□□□□ -2.63
RHBDL3P58872 RNA5SP192-201ENST00000364404 120 ntBASIC-1.36□□□□□ -2.63
RHBDL3P58872 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.36□□□□□ -2.63
RHBDL3P58872 MIR203A-201ENST00000384836 110 ntBASIC-1.36□□□□□ -2.63
RHBDL3P58872 AC140658.3-201ENST00000567603 271 ntBASIC-1.36□□□□□ -2.63
RHBDL3P58872 AL353803.5-201ENST00000599815 141 ntBASIC-1.36□□□□□ -2.63
RHBDL3P58872 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.36□□□□□ -2.63
RHBDL3P58872 U4.2-201ENST00000618561 85 ntBASIC-1.36□□□□□ -2.63
RHBDL3P58872 SNORD114-17-201ENST00000364699 75 ntBASIC-1.37□□□□□ -2.63
RHBDL3P58872 SNORD113-1-201ENST00000365321 69 ntBASIC-1.37□□□□□ -2.63
RHBDL3P58872 MIR3165-201ENST00000579874 75 ntBASIC-1.37□□□□□ -2.63
RHBDL3P58872 MIR382-201ENST00000637119 76 ntBASIC-1.37□□□□□ -2.63
RHBDL3P58872 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.38□□□□□ -2.63
RHBDL3P58872 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.38□□□□□ -2.63
RHBDL3P58872 MIR4464-201ENST00000580818 92 ntBASIC-1.38□□□□□ -2.63
RHBDL3P58872 MIR4306-201ENST00000583390 91 ntBASIC-1.38□□□□□ -2.63
RHBDL3P58872 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.39□□□□□ -2.63
RHBDL3P58872 SNORD77.2-201ENST00000391045 68 ntBASIC-1.39□□□□□ -2.63
RHBDL3P58872 SNORA40.13-201ENST00000516379 120 ntBASIC-1.39□□□□□ -2.63
RHBDL3P58872 RNU7-153P-201ENST00000516455 62 ntBASIC-1.39□□□□□ -2.63
RHBDL3P58872 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.4□□□□□ -2.63
RHBDL3P58872 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.4□□□□□ -2.63
RHBDL3P58872 snoU83B.1-201ENST00000517136 88 ntBASIC-1.4□□□□□ -2.63
RHBDL3P58872 MIR450A1-201ENST00000362262 91 ntBASIC-1.42□□□□□ -2.64
RHBDL3P58872 RNU6-633P-201ENST00000362612 103 ntBASIC-1.42□□□□□ -2.64
RHBDL3P58872 SNORA33.1-201ENST00000364957 130 ntBASIC-1.42□□□□□ -2.64
RHBDL3P58872 AL445584.3-201ENST00000617173 78 ntBASIC-1.42□□□□□ -2.64
RHBDL3P58872 MIR6888-201ENST00000621977 67 ntBASIC-1.42□□□□□ -2.64
RHBDL3P58872 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.43□□□□□ -2.64
RHBDL3P58872 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.43□□□□□ -2.64
RHBDL3P58872 RNY4P18-201ENST00000391107 89 ntBASIC-1.43□□□□□ -2.64
RHBDL3P58872 AL603908.1-201ENST00000406098 201 ntBASIC-1.43□□□□□ -2.64
RHBDL3P58872 MIR1255B2-201ENST00000408618 67 ntBASIC-1.43□□□□□ -2.64
RHBDL3P58872 MIR4668-201ENST00000582284 70 ntBASIC-1.43□□□□□ -2.64
RHBDL3P58872 RNU6-340P-201ENST00000364005 107 ntBASIC-1.44□□□□□ -2.64
RHBDL3P58872 MIR521-2-201ENST00000384818 87 ntBASIC-1.44□□□□□ -2.64
RHBDL3P58872 MIR3115-201ENST00000577915 68 ntBASIC-1.44□□□□□ -2.64
RHBDL3P58872 SNORD116-22-201ENST00000384430 92 ntBASIC-1.45□□□□□ -2.64
RHBDL3P58872 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.45□□□□□ -2.64
RHBDL3P58872 SNORD115-27-201ENST00000364430 82 ntBASIC-1.46□□□□□ -2.64
RHBDL3P58872 MIR1207-201ENST00000408249 87 ntBASIC-1.46□□□□□ -2.64
RHBDL3P58872 AP001318.4-201ENST00000616637 121 ntBASIC-1.46□□□□□ -2.64
RHBDL3P58872 RNU6-755P-201ENST00000364400 103 ntBASIC-1.47□□□□□ -2.64
RHBDL3P58872 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.47□□□□□ -2.64
RHBDL3P58872 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.47□□□□□ -2.64
RHBDL3P58872 SNORD114-3-201ENST00000364969 75 ntBASIC-1.48□□□□□ -2.65
RHBDL3P58872 CYP3A54P-201ENST00000566950 75 ntBASIC-1.48□□□□□ -2.65
RHBDL3P58872 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.49□□□□□ -2.65
RHBDL3P58872 RNU6-924P-201ENST00000362926 108 ntBASIC-1.49□□□□□ -2.65
RHBDL3P58872 AC093729.1-201ENST00000513074 128 ntBASIC-1.49□□□□□ -2.65
RHBDL3P58872 RNU6-789P-201ENST00000517105 102 ntBASIC-1.49□□□□□ -2.65
RHBDL3P58872 MIR6739-201ENST00000622461 75 ntBASIC-1.49□□□□□ -2.65
RHBDL3P58872 MIR365A-201ENST00000362260 87 ntBASIC-1.5□□□□□ -2.65
RHBDL3P58872 RNA5SP180-201ENST00000516181 101 ntBASIC-1.51□□□□□ -2.65
RHBDL3P58872 MALAT1.1-201ENST00000618249 95 ntBASIC-1.51□□□□□ -2.65
RHBDL3P58872 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.51□□□□□ -2.65
RHBDL3P58872 AL606753.1-201ENST00000427435 87 ntBASIC-1.52□□□□□ -2.65
RHBDL3P58872 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.52□□□□□ -2.65
RHBDL3P58872 RNU6-32P-201ENST00000383948 107 ntBASIC-1.53□□□□□ -2.65
RHBDL3P58872 RNU6-13P-201ENST00000384248 107 ntBASIC-1.53□□□□□ -2.65
RHBDL3P58872 RNU6-12P-201ENST00000384604 107 ntBASIC-1.53□□□□□ -2.65
RHBDL3P58872 RNU6-41P-201ENST00000384741 107 ntBASIC-1.53□□□□□ -2.65
RHBDL3P58872 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.53□□□□□ -2.65
RHBDL3P58872 RNU7-154P-201ENST00000516194 62 ntBASIC-1.54□□□□□ -2.66
RHBDL3P58872 RNU6-706P-201ENST00000517229 104 ntBASIC-1.54□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 298.5 ms