Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 MIR3133-201ENST00000583157 78 ntBASIC-1.38□□□□□ -2.63
PKNOX1P55347 MIR6739-201ENST00000622461 75 ntBASIC-1.38□□□□□ -2.63
PKNOX1P55347 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.39□□□□□ -2.63
PKNOX1P55347 RNU6-704P-201ENST00000364162 103 ntBASIC-1.39□□□□□ -2.63
PKNOX1P55347 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.39□□□□□ -2.63
PKNOX1P55347 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.39□□□□□ -2.63
PKNOX1P55347 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.4□□□□□ -2.63
PKNOX1P55347 RNU6-746P-201ENST00000384112 109 ntBASIC-1.4□□□□□ -2.63
PKNOX1P55347 RNU6-106P-201ENST00000384405 107 ntBASIC-1.4□□□□□ -2.63
PKNOX1P55347 AL450471.1-201ENST00000447509 127 ntBASIC-1.4□□□□□ -2.63
PKNOX1P55347 RNU7-154P-201ENST00000516194 62 ntBASIC-1.4□□□□□ -2.63
PKNOX1P55347 RNU6-752P-201ENST00000516376 102 ntBASIC-1.4□□□□□ -2.63
PKNOX1P55347 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.4□□□□□ -2.63
PKNOX1P55347 SNORD115-27-201ENST00000364430 82 ntBASIC-1.41□□□□□ -2.64
PKNOX1P55347 RNA5SP331-201ENST00000364986 107 ntBASIC-1.41□□□□□ -2.64
PKNOX1P55347 SNORA26.4-201ENST00000391188 123 ntBASIC-1.41□□□□□ -2.64
PKNOX1P55347 MIR4306-201ENST00000583390 91 ntBASIC-1.41□□□□□ -2.64
PKNOX1P55347 RNU6-340P-201ENST00000364005 107 ntBASIC-1.42□□□□□ -2.64
PKNOX1P55347 SNORA19-201ENST00000384737 128 ntBASIC-1.42□□□□□ -2.64
PKNOX1P55347 MIR519A2-201ENST00000384990 87 ntBASIC-1.42□□□□□ -2.64
PKNOX1P55347 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.42□□□□□ -2.64
PKNOX1P55347 SNORD115-33-201ENST00000363723 82 ntBASIC-1.43□□□□□ -2.64
PKNOX1P55347 SNORD63.1-201ENST00000516178 80 ntBASIC-1.43□□□□□ -2.64
PKNOX1P55347 RNU6-774P-201ENST00000363238 107 ntBASIC-1.44□□□□□ -2.64
PKNOX1P55347 RNU6-209P-201ENST00000384118 107 ntBASIC-1.44□□□□□ -2.64
PKNOX1P55347 RNU6-959P-201ENST00000384671 107 ntBASIC-1.44□□□□□ -2.64
PKNOX1P55347 SNX3P1X-201ENST00000414887 175 ntBASIC-1.44□□□□□ -2.64
PKNOX1P55347 RNU6-479P-201ENST00000516348 105 ntBASIC-1.44□□□□□ -2.64
PKNOX1P55347 RNA5SP461-201ENST00000516451 104 ntBASIC-1.44□□□□□ -2.64
PKNOX1P55347 RNU2-51P-201ENST00000410708 197 ntBASIC-1.45□□□□□ -2.64
PKNOX1P55347 RNU6-518P-201ENST00000516056 96 ntBASIC-1.45□□□□□ -2.64
PKNOX1P55347 AC132825.6-201ENST00000638861 357 ntBASIC-1.45□□□□□ -2.64
PKNOX1P55347 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.46□□□□□ -2.64
PKNOX1P55347 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.47□□□□□ -2.64
PKNOX1P55347 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.47□□□□□ -2.64
PKNOX1P55347 MIR29B1-201ENST00000385015 81 ntBASIC-1.47□□□□□ -2.64
PKNOX1P55347 MIR519C-201ENST00000385053 87 ntBASIC-1.47□□□□□ -2.64
PKNOX1P55347 SNORD77.2-201ENST00000391045 68 ntBASIC-1.47□□□□□ -2.64
PKNOX1P55347 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.47□□□□□ -2.64
PKNOX1P55347 AC008267.6-201ENST00000441664 139 ntBASIC-1.47□□□□□ -2.64
PKNOX1P55347 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.47□□□□□ -2.64
PKNOX1P55347 MIR6129-201ENST00000616087 109 ntBASIC-1.47□□□□□ -2.64
PKNOX1P55347 RNU6-681P-201ENST00000364012 104 ntBASIC-1.48□□□□□ -2.65
PKNOX1P55347 SNORD115-22-201ENST00000364456 82 ntBASIC-1.48□□□□□ -2.65
PKNOX1P55347 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.48□□□□□ -2.65
PKNOX1P55347 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.48□□□□□ -2.65
PKNOX1P55347 MIR601-201ENST00000385256 79 ntBASIC-1.48□□□□□ -2.65
PKNOX1P55347 MIR8485-201ENST00000401372 91 ntBASIC-1.48□□□□□ -2.65
PKNOX1P55347 AL035461.1-201ENST00000421490 332 ntBASIC-1.48□□□□□ -2.65
PKNOX1P55347 MIR6818-201ENST00000621576 65 ntBASIC-1.48□□□□□ -2.65
PKNOX1P55347 MIR198-201ENST00000637333 62 ntBASIC-1.48□□□□□ -2.65
PKNOX1P55347 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.49□□□□□ -2.65
PKNOX1P55347 AL021921.1-201ENST00000442774 93 ntBASIC-1.49□□□□□ -2.65
PKNOX1P55347 AL365222.1-201ENST00000614661 98 ntBASIC-1.49□□□□□ -2.65
PKNOX1P55347 RNU6-766P-201ENST00000362478 107 ntBASIC-1.5□□□□□ -2.65
PKNOX1P55347 RNU4-61P-201ENST00000411243 107 ntBASIC-1.5□□□□□ -2.65
PKNOX1P55347 MTATP8P2-201ENST00000435212 202 ntBASIC-1.5□□□□□ -2.65
PKNOX1P55347 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.5□□□□□ -2.65
PKNOX1P55347 RNU6-589P-201ENST00000516485 107 ntBASIC-1.51□□□□□ -2.65
PKNOX1P55347 RNU6-656P-201ENST00000516785 107 ntBASIC-1.51□□□□□ -2.65
PKNOX1P55347 RNU6-158P-201ENST00000517104 100 ntBASIC-1.51□□□□□ -2.65
PKNOX1P55347 AL627230.5-201ENST00000619807 58 ntBASIC-1.51□□□□□ -2.65
PKNOX1P55347 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.52□□□□□ -2.65
PKNOX1P55347 RNA5SP180-201ENST00000516181 101 ntBASIC-1.52□□□□□ -2.65
PKNOX1P55347 RNU6-706P-201ENST00000517229 104 ntBASIC-1.52□□□□□ -2.65
PKNOX1P55347 RNU6-576P-201ENST00000390854 102 ntBASIC-1.53□□□□□ -2.65
PKNOX1P55347 MIR1468-201ENST00000410600 86 ntBASIC-1.53□□□□□ -2.65
PKNOX1P55347 AL353691.2-201ENST00000443795 59 ntBASIC-1.53□□□□□ -2.65
PKNOX1P55347 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.53□□□□□ -2.65
PKNOX1P55347 MIR548AG1-201ENST00000579932 66 ntBASIC-1.53□□□□□ -2.65
PKNOX1P55347 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.53□□□□□ -2.65
PKNOX1P55347 RNA5SP26-201ENST00000362406 119 ntBASIC-1.54□□□□□ -2.66
PKNOX1P55347 RNU6-633P-201ENST00000362612 103 ntBASIC-1.54□□□□□ -2.66
PKNOX1P55347 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.54□□□□□ -2.66
PKNOX1P55347 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.54□□□□□ -2.66
PKNOX1P55347 RNU6-81P-201ENST00000365608 104 ntBASIC-1.54□□□□□ -2.66
PKNOX1P55347 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.54□□□□□ -2.66
PKNOX1P55347 MIR527-201ENST00000385244 85 ntBASIC-1.54□□□□□ -2.66
PKNOX1P55347 MIR889-201ENST00000401280 79 ntBASIC-1.55□□□□□ -2.66
PKNOX1P55347 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.55□□□□□ -2.66
PKNOX1P55347 U2.7-201ENST00000619197 100 ntBASIC-1.55□□□□□ -2.66
PKNOX1P55347 AL078595.1-201ENST00000404458 226 ntBASIC-1.56□□□□□ -2.66
PKNOX1P55347 RNU6-732P-201ENST00000516033 103 ntBASIC-1.56□□□□□ -2.66
PKNOX1P55347 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.56□□□□□ -2.66
PKNOX1P55347 MIR4668-201ENST00000582284 70 ntBASIC-1.57□□□□□ -2.66
PKNOX1P55347 RNU6-624P-201ENST00000363411 107 ntBASIC-1.58□□□□□ -2.66
PKNOX1P55347 SNORD115-37-201ENST00000363768 82 ntBASIC-1.58□□□□□ -2.66
PKNOX1P55347 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.58□□□□□ -2.66
PKNOX1P55347 RNU6-246P-201ENST00000384702 107 ntBASIC-1.58□□□□□ -2.66
PKNOX1P55347 MIR507-201ENST00000385234 94 ntBASIC-1.58□□□□□ -2.66
PKNOX1P55347 RNU6-834P-201ENST00000362367 110 ntBASIC-1.59□□□□□ -2.66
PKNOX1P55347 RNU6-807P-201ENST00000516805 107 ntBASIC-1.59□□□□□ -2.66
PKNOX1P55347 AP002795.1-201ENST00000534879 84 ntBASIC-1.59□□□□□ -2.66
PKNOX1P55347 AC138207.3-201ENST00000585289 166 ntBASIC-1.59□□□□□ -2.66
PKNOX1P55347 AC091912.2-201ENST00000624798 167 ntBASIC-1.59□□□□□ -2.66
PKNOX1P55347 RNU6-645P-201ENST00000364649 106 ntBASIC-1.6□□□□□ -2.67
PKNOX1P55347 U7.5-201ENST00000517224 61 ntBASIC-1.6□□□□□ -2.67
PKNOX1P55347 MIR6874-201ENST00000635894 71 ntBASIC-1.6□□□□□ -2.67
PKNOX1P55347 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.61□□□□□ -2.67
PKNOX1P55347 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 183 ms