Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 AC114801.3-201ENST00000510231 177 ntBASIC0.32□□□□□ -2.36
TTC3P53804 MIR499B-201ENST00000636498 73 ntBASIC0.32□□□□□ -2.36
TTC3P53804 MIR548H2-201ENST00000408874 88 ntBASIC0.31□□□□□ -2.36
TTC3P53804 RNU7-129P-201ENST00000516128 62 ntBASIC0.31□□□□□ -2.36
TTC3P53804 RNA5SP62-201ENST00000363457 110 ntBASIC0.3□□□□□ -2.36
TTC3P53804 SNORA49-201ENST00000386157 136 ntBASIC0.3□□□□□ -2.36
TTC3P53804 RNA5SP299-201ENST00000391203 116 ntBASIC0.3□□□□□ -2.36
TTC3P53804 RNU6-940P-201ENST00000363433 104 ntBASIC0.3□□□□□ -2.36
TTC3P53804 SNORA25.4-201ENST00000363666 124 ntBASIC0.3□□□□□ -2.36
TTC3P53804 SNORA25.5-201ENST00000363782 126 ntBASIC0.3□□□□□ -2.36
TTC3P53804 AC005520.4-201ENST00000604337 90 ntBASIC0.3□□□□□ -2.36
TTC3P53804 AC104408.1-201ENST00000605241 170 ntBASIC0.3□□□□□ -2.36
TTC3P53804 SNORA33.1-201ENST00000364957 130 ntBASIC0.29□□□□□ -2.36
TTC3P53804 RNU6-337P-201ENST00000391243 106 ntBASIC0.29□□□□□ -2.36
TTC3P53804 MIR892B-201ENST00000401279 77 ntBASIC0.29□□□□□ -2.36
TTC3P53804 SNORA63.6-201ENST00000364921 119 ntBASIC0.28□□□□□ -2.36
TTC3P53804 RNU6-540P-201ENST00000384622 101 ntBASIC0.28□□□□□ -2.36
TTC3P53804 AC021146.9-201ENST00000512503 156 ntBASIC0.28□□□□□ -2.36
TTC3P53804 MIR4667-201ENST00000578933 66 ntBASIC0.28□□□□□ -2.36
TTC3P53804 RNU6-649P-201ENST00000384463 107 ntBASIC0.28□□□□□ -2.37
TTC3P53804 RNU6-630P-201ENST00000391258 106 ntBASIC0.28□□□□□ -2.37
TTC3P53804 SNORD30.1-201ENST00000391309 70 ntBASIC0.28□□□□□ -2.37
TTC3P53804 MIR4514-201ENST00000581410 57 ntBASIC0.28□□□□□ -2.37
TTC3P53804 U4.4-201ENST00000620626 117 ntBASIC0.28□□□□□ -2.37
TTC3P53804 MIR630-201ENST00000384957 97 ntBASIC0.27□□□□□ -2.37
TTC3P53804 RN7SL660P-201ENST00000614852 299 ntBASIC0.27□□□□□ -2.37
TTC3P53804 RNA5SP214-201ENST00000363378 118 ntBASIC0.26□□□□□ -2.37
TTC3P53804 Y_RNA.375-201ENST00000365625 101 ntBASIC0.26□□□□□ -2.37
TTC3P53804 RNU6-1036P-201ENST00000383959 104 ntBASIC0.26□□□□□ -2.37
TTC3P53804 RNU6-604P-201ENST00000390917 100 ntBASIC0.26□□□□□ -2.37
TTC3P53804 CR383656.4-201ENST00000546909 122 ntBASIC0.26□□□□□ -2.37
TTC3P53804 AC090617.8-201ENST00000623339 167 ntBASIC0.26□□□□□ -2.37
TTC3P53804 RNU6-502P-201ENST00000362419 108 ntBASIC0.26□□□□□ -2.37
TTC3P53804 RNU7-174P-201ENST00000516248 59 ntBASIC0.26□□□□□ -2.37
TTC3P53804 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.25□□□□□ -2.37
TTC3P53804 MIRLET7D-201ENST00000362263 87 ntBASIC0.25□□□□□ -2.37
TTC3P53804 RNU6-645P-201ENST00000364649 106 ntBASIC0.25□□□□□ -2.37
TTC3P53804 SNORD116-24-201ENST00000384549 92 ntBASIC0.25□□□□□ -2.37
TTC3P53804 MIR876-201ENST00000401147 81 ntBASIC0.25□□□□□ -2.37
TTC3P53804 RNU7-159P-201ENST00000459284 62 ntBASIC0.25□□□□□ -2.37
TTC3P53804 MIR6773-201ENST00000612812 74 ntBASIC0.25□□□□□ -2.37
TTC3P53804 RNU6-698P-201ENST00000363523 107 ntBASIC0.25□□□□□ -2.37
TTC3P53804 RNU6-34P-201ENST00000364874 107 ntBASIC0.25□□□□□ -2.37
TTC3P53804 MIR582-201ENST00000365731 98 ntBASIC0.25□□□□□ -2.37
TTC3P53804 MIR519A2-201ENST00000384990 87 ntBASIC0.25□□□□□ -2.37
TTC3P53804 MIR610-201ENST00000385139 96 ntBASIC0.25□□□□□ -2.37
TTC3P53804 RNU6-788P-201ENST00000390967 104 ntBASIC0.25□□□□□ -2.37
TTC3P53804 AC108740.1-201ENST00000498629 225 ntBASIC0.25□□□□□ -2.37
TTC3P53804 MIR4511-201ENST00000582784 87 ntBASIC0.25□□□□□ -2.37
TTC3P53804 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
TTC3P53804 MIR4743-201ENST00000584576 69 ntBASIC0.24□□□□□ -2.37
TTC3P53804 RNU6-895P-201ENST00000384125 103 ntBASIC0.23□□□□□ -2.37
TTC3P53804 MIR1255B2-201ENST00000408618 67 ntBASIC0.23□□□□□ -2.37
TTC3P53804 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.23□□□□□ -2.37
TTC3P53804 SNORD114-9-201ENST00000364370 72 ntBASIC0.23□□□□□ -2.37
TTC3P53804 Y_RNA.386-201ENST00000383913 105 ntBASIC0.23□□□□□ -2.37
TTC3P53804 AC096531.1-201ENST00000419107 107 ntBASIC0.23□□□□□ -2.37
TTC3P53804 RNU7-154P-201ENST00000516194 62 ntBASIC0.23□□□□□ -2.37
TTC3P53804 RNU6-668P-201ENST00000364180 107 ntBASIC0.21□□□□□ -2.38
TTC3P53804 RNU6-180P-201ENST00000516697 61 ntBASIC0.21□□□□□ -2.38
TTC3P53804 RNA5SP192-201ENST00000364404 120 ntBASIC0.21□□□□□ -2.38
TTC3P53804 Y_RNA.340-201ENST00000365330 92 ntBASIC0.21□□□□□ -2.38
TTC3P53804 MIR593-201ENST00000384856 100 ntBASIC0.21□□□□□ -2.38
TTC3P53804 RNU6-815P-201ENST00000384080 113 ntBASIC0.2□□□□□ -2.38
TTC3P53804 RNA5SP163-201ENST00000410304 99 ntBASIC0.2□□□□□ -2.38
TTC3P53804 AP000676.1-201ENST00000533307 52 ntBASIC0.2□□□□□ -2.38
TTC3P53804 Y_RNA.68-201ENST00000362881 102 ntBASIC0.2□□□□□ -2.38
TTC3P53804 AC110620.1-201ENST00000416042 228 ntBASIC0.2□□□□□ -2.38
TTC3P53804 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.2□□□□□ -2.38
TTC3P53804 SNORA42.1-201ENST00000363515 137 ntBASIC0.19□□□□□ -2.38
TTC3P53804 RNU6-46P-201ENST00000383860 107 ntBASIC0.18□□□□□ -2.38
TTC3P53804 Y_RNA.443-201ENST00000384135 111 ntBASIC0.18□□□□□ -2.38
TTC3P53804 MIR548V-201ENST00000584165 80 ntBASIC0.18□□□□□ -2.38
TTC3P53804 MIR6759-201ENST00000638110 65 ntBASIC0.18□□□□□ -2.38
TTC3P53804 RNU6-1216P-201ENST00000362590 107 ntBASIC0.18□□□□□ -2.38
TTC3P53804 U2.7-201ENST00000619197 100 ntBASIC0.18□□□□□ -2.38
TTC3P53804 Y_RNA.178-201ENST00000363832 102 ntBASIC0.17□□□□□ -2.38
TTC3P53804 RNU6-1184P-201ENST00000384588 108 ntBASIC0.17□□□□□ -2.38
TTC3P53804 MIR145-201ENST00000384967 88 ntBASIC0.17□□□□□ -2.38
TTC3P53804 RNU6-127P-201ENST00000390897 107 ntBASIC0.17□□□□□ -2.38
TTC3P53804 RNU7-165P-201ENST00000458864 60 ntBASIC0.17□□□□□ -2.38
TTC3P53804 AC125388.1-201ENST00000459631 156 ntBASIC0.17□□□□□ -2.38
TTC3P53804 Y_RNA.246-201ENST00000364495 108 ntBASIC0.16□□□□□ -2.38
TTC3P53804 U6.96-201ENST00000636425 70 ntBASIC0.16□□□□□ -2.38
TTC3P53804 MIR9-2-201ENST00000384838 87 ntBASIC0.16□□□□□ -2.38
TTC3P53804 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
TTC3P53804 MIR1265-201ENST00000408444 86 ntBASIC0.16□□□□□ -2.38
TTC3P53804 RNA5SP134-201ENST00000516492 96 ntBASIC0.16□□□□□ -2.38
TTC3P53804 SNORD113-2-201ENST00000391082 72 ntBASIC0.15□□□□□ -2.39
TTC3P53804 MIR4432-201ENST00000581823 84 ntBASIC0.15□□□□□ -2.39
TTC3P53804 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.14□□□□□ -2.39
TTC3P53804 AC103706.3-201ENST00000636297 85 ntBASIC0.14□□□□□ -2.39
TTC3P53804 SNORD115-25-201ENST00000362619 82 ntBASIC0.14□□□□□ -2.39
TTC3P53804 RNU6-800P-201ENST00000384473 103 ntBASIC0.14□□□□□ -2.39
TTC3P53804 AL021921.1-201ENST00000442774 93 ntBASIC0.14□□□□□ -2.39
TTC3P53804 Y_RNA.433-201ENST00000384089 102 ntBASIC0.13□□□□□ -2.39
TTC3P53804 U6.111-201ENST00000636093 83 ntBASIC0.13□□□□□ -2.39
TTC3P53804 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
TTC3P53804 RNA5SP476-201ENST00000516613 103 ntBASIC0.12□□□□□ -2.39
TTC3P53804 MIR6514-201ENST00000622549 70 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 184 ms