Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MIR6739-201ENST00000622461 75 ntBASIC0.04□□□□□ -2.4
COPB1P53618 MIR664A-201ENST00000626086 82 ntBASIC0.04□□□□□ -2.4
COPB1P53618 RNA5SP98-201ENST00000363158 137 ntBASIC0.03□□□□□ -2.4
COPB1P53618 RNU7-159P-201ENST00000459284 62 ntBASIC0.03□□□□□ -2.4
COPB1P53618 MIR6507-201ENST00000613630 70 ntBASIC0.03□□□□□ -2.4
COPB1P53618 MIR6759-201ENST00000638110 65 ntBASIC0.03□□□□□ -2.4
COPB1P53618 SNORA15B-2-201ENST00000384058 135 ntBASIC0.02□□□□□ -2.41
COPB1P53618 SNORA15B-1-201ENST00000384334 135 ntBASIC0.02□□□□□ -2.41
COPB1P53618 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
COPB1P53618 SNORD115-25-201ENST00000362619 82 ntBASIC0.01□□□□□ -2.41
COPB1P53618 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
COPB1P53618 SNORD45.1-201ENST00000363181 77 ntBASIC0.01□□□□□ -2.41
COPB1P53618 MIR521-2-201ENST00000384818 87 ntBASIC0.01□□□□□ -2.41
COPB1P53618 MIR3134-201ENST00000579433 74 ntBASIC0.01□□□□□ -2.41
COPB1P53618 RNU6-502P-201ENST00000362419 108 ntBASIC0□□□□□ -2.41
COPB1P53618 RNU6-337P-201ENST00000391243 106 ntBASIC0□□□□□ -2.41
COPB1P53618 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
COPB1P53618 U7.4-201ENST00000614961 63 ntBASIC0□□□□□ -2.41
COPB1P53618 RNU6-929P-201ENST00000384429 107 ntBASIC-0.01□□□□□ -2.41
COPB1P53618 MIR6773-201ENST00000612812 74 ntBASIC-0.01□□□□□ -2.41
COPB1P53618 SNORD115-22-201ENST00000364456 82 ntBASIC-0.02□□□□□ -2.41
COPB1P53618 SNORA33.1-201ENST00000364957 130 ntBASIC-0.02□□□□□ -2.41
COPB1P53618 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.02□□□□□ -2.41
COPB1P53618 RNU6-604P-201ENST00000390917 100 ntBASIC-0.02□□□□□ -2.41
COPB1P53618 RNU6-70P-201ENST00000516438 60 ntBASIC-0.02□□□□□ -2.41
COPB1P53618 RNU6-656P-201ENST00000516785 107 ntBASIC-0.02□□□□□ -2.41
COPB1P53618 MIR6086-201ENST00000638065 55 ntBASIC-0.02□□□□□ -2.41
COPB1P53618 AP000676.1-201ENST00000533307 52 ntBASIC-0.03□□□□□ -2.41
COPB1P53618 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.03□□□□□ -2.41
COPB1P53618 MIR655-201ENST00000362159 97 ntBASIC-0.04□□□□□ -2.42
COPB1P53618 RNA5SP476-201ENST00000516613 103 ntBASIC-0.04□□□□□ -2.42
COPB1P53618 AC090617.8-201ENST00000623339 167 ntBASIC-0.04□□□□□ -2.42
COPB1P53618 U6.96-201ENST00000636425 70 ntBASIC-0.04□□□□□ -2.42
COPB1P53618 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.05□□□□□ -2.42
COPB1P53618 RNU6-46P-201ENST00000383860 107 ntBASIC-0.05□□□□□ -2.42
COPB1P53618 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.05□□□□□ -2.42
COPB1P53618 AC244250.2-201ENST00000418731 148 ntBASIC-0.05□□□□□ -2.42
COPB1P53618 RNU6-687P-201ENST00000516443 89 ntBASIC-0.05□□□□□ -2.42
COPB1P53618 MIR5589-201ENST00000579442 60 ntBASIC-0.05□□□□□ -2.42
COPB1P53618 MIR8053-201ENST00000613344 75 ntBASIC-0.05□□□□□ -2.42
COPB1P53618 RNU6-645P-201ENST00000364649 106 ntBASIC-0.06□□□□□ -2.42
COPB1P53618 MIR9-2-201ENST00000384838 87 ntBASIC-0.06□□□□□ -2.42
COPB1P53618 RNU6-587P-201ENST00000391282 106 ntBASIC-0.06□□□□□ -2.42
COPB1P53618 MIR1265-201ENST00000408444 86 ntBASIC-0.06□□□□□ -2.42
COPB1P53618 AC104692.1-201ENST00000472406 90 ntBASIC-0.06□□□□□ -2.42
COPB1P53618 MIR4636-201ENST00000582271 80 ntBASIC-0.06□□□□□ -2.42
COPB1P53618 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.07□□□□□ -2.42
COPB1P53618 RNU6-411P-201ENST00000384451 107 ntBASIC-0.07□□□□□ -2.42
COPB1P53618 MIRLET7B-201ENST00000385140 83 ntBASIC-0.07□□□□□ -2.42
COPB1P53618 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
COPB1P53618 RNU7-55P-201ENST00000459426 62 ntBASIC-0.07□□□□□ -2.42
COPB1P53618 RNU6-982P-201ENST00000516216 102 ntBASIC-0.07□□□□□ -2.42
COPB1P53618 RNU6-523P-201ENST00000516304 54 ntBASIC-0.07□□□□□ -2.42
COPB1P53618 RNU6-881P-201ENST00000516813 102 ntBASIC-0.07□□□□□ -2.42
COPB1P53618 RNU6-302P-201ENST00000365249 107 ntBASIC-0.08□□□□□ -2.42
COPB1P53618 RNU6-900P-201ENST00000384498 102 ntBASIC-0.08□□□□□ -2.42
COPB1P53618 HAR1A.1-201ENST00000459583 118 ntBASIC-0.08□□□□□ -2.42
COPB1P53618 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.08□□□□□ -2.42
COPB1P53618 SNORD113.1-201ENST00000363280 73 ntBASIC-0.09□□□□□ -2.42
COPB1P53618 SNORD45A-201ENST00000384512 84 ntBASIC-0.09□□□□□ -2.42
COPB1P53618 RNU6-455P-201ENST00000384681 107 ntBASIC-0.09□□□□□ -2.42
COPB1P53618 CYP3A54P-201ENST00000566950 75 ntBASIC-0.09□□□□□ -2.42
COPB1P53618 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.1□□□□□ -2.43
COPB1P53618 MIR1295B-201ENST00000636144 60 ntBASIC-0.1□□□□□ -2.43
COPB1P53618 SNORD115-31-201ENST00000365318 82 ntBASIC-0.11□□□□□ -2.43
COPB1P53618 MIR154-201ENST00000385243 84 ntBASIC-0.11□□□□□ -2.43
COPB1P53618 IGLVI-20-201ENST00000519296 130 ntBASIC-0.11□□□□□ -2.43
COPB1P53618 MIR4802-201ENST00000581881 80 ntBASIC-0.11□□□□□ -2.43
COPB1P53618 SNORD115-23-201ENST00000364461 82 ntBASIC-0.12□□□□□ -2.43
COPB1P53618 SNORD49B-201ENST00000365172 72 ntBASIC-0.12□□□□□ -2.43
COPB1P53618 MIR4662A-201ENST00000637499 67 ntBASIC-0.12□□□□□ -2.43
COPB1P53618 SNORD114-31-201ENST00000363219 75 ntBASIC-0.13□□□□□ -2.43
COPB1P53618 MIR889-201ENST00000401280 79 ntBASIC-0.13□□□□□ -2.43
COPB1P53618 SNORA18.1-201ENST00000363418 128 ntBASIC-0.14□□□□□ -2.43
COPB1P53618 RNU6-776P-201ENST00000364403 104 ntBASIC-0.14□□□□□ -2.43
COPB1P53618 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.14□□□□□ -2.43
COPB1P53618 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.14□□□□□ -2.43
COPB1P53618 RNU6-638P-201ENST00000516582 104 ntBASIC-0.14□□□□□ -2.43
COPB1P53618 U2.7-201ENST00000619197 100 ntBASIC-0.14□□□□□ -2.43
COPB1P53618 MIR1255B2-201ENST00000408618 67 ntBASIC-0.15□□□□□ -2.43
COPB1P53618 RNU6-973P-201ENST00000364690 107 ntBASIC-0.16□□□□□ -2.44
COPB1P53618 SNORD116-24-201ENST00000384549 92 ntBASIC-0.16□□□□□ -2.44
COPB1P53618 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.16□□□□□ -2.44
COPB1P53618 RNU6-634P-201ENST00000459134 106 ntBASIC-0.16□□□□□ -2.44
COPB1P53618 AC096531.1-201ENST00000419107 107 ntBASIC-0.17□□□□□ -2.44
COPB1P53618 MTND4LP1-201ENST00000446263 157 ntBASIC-0.17□□□□□ -2.44
COPB1P53618 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.17□□□□□ -2.44
COPB1P53618 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.18□□□□□ -2.44
COPB1P53618 SNORD114-12-201ENST00000365400 75 ntBASIC-0.18□□□□□ -2.44
COPB1P53618 SNORD56B-201ENST00000384713 71 ntBASIC-0.18□□□□□ -2.44
COPB1P53618 RNA5SP470-201ENST00000516463 106 ntBASIC-0.18□□□□□ -2.44
COPB1P53618 AL590491.3-201ENST00000610731 82 ntBASIC-0.18□□□□□ -2.44
COPB1P53618 AL391099.1-201ENST00000624635 187 ntBASIC-0.18□□□□□ -2.44
COPB1P53618 SNORA32.1-201ENST00000364514 115 ntBASIC-0.19□□□□□ -2.44
COPB1P53618 RNU6-540P-201ENST00000384622 101 ntBASIC-0.19□□□□□ -2.44
COPB1P53618 SNORD4A-201ENST00000459174 72 ntBASIC-0.19□□□□□ -2.44
COPB1P53618 MIR4432-201ENST00000581823 84 ntBASIC-0.19□□□□□ -2.44
COPB1P53618 uc_338.36-201ENST00000622331 158 ntBASIC-0.19□□□□□ -2.44
COPB1P53618 RNU6-895P-201ENST00000384125 103 ntBASIC-0.2□□□□□ -2.44
COPB1P53618 MIR519A2-201ENST00000384990 87 ntBASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 229.3 ms