Protein–RNA interactions for Protein: P51858

HDGF, Hepatoma-derived growth factor, humanhuman

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP51858 RN7SL793P-201ENST00000583259 296 ntBASIC1.4□□□□□ -2.19
HDGFP51858 SNORA25.18-201ENST00000607153 114 ntBASIC1.4□□□□□ -2.19
HDGFP51858 RNU6-246P-201ENST00000384702 107 ntBASIC1.39□□□□□ -2.19
HDGFP51858 RNU7-188P-201ENST00000517063 64 ntBASIC1.39□□□□□ -2.19
HDGFP51858 MIR4490-201ENST00000582647 84 ntBASIC1.39□□□□□ -2.19
HDGFP51858 SNORA36.2-201ENST00000384004 127 ntBASIC1.38□□□□□ -2.19
HDGFP51858 ACA64.5-201ENST00000516207 127 ntBASIC1.38□□□□□ -2.19
HDGFP51858 AL353765.1-201ENST00000605514 183 ntBASIC1.38□□□□□ -2.19
HDGFP51858 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HDGFP51858 MIR548F3-201ENST00000408509 87 ntBASIC1.37□□□□□ -2.19
HDGFP51858 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.35□□□□□ -2.19
HDGFP51858 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
HDGFP51858 SNORD114-29-201ENST00000364819 70 ntBASIC1.34□□□□□ -2.19
HDGFP51858 Y_RNA.423-201ENST00000384057 113 ntBASIC1.34□□□□□ -2.19
HDGFP51858 MIR216A-201ENST00000385063 110 ntBASIC1.34□□□□□ -2.19
HDGFP51858 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.34□□□□□ -2.19
HDGFP51858 RNU6-229P-201ENST00000516614 102 ntBASIC1.33□□□□□ -2.2
HDGFP51858 RNU6-458P-201ENST00000384179 107 ntBASIC1.32□□□□□ -2.2
HDGFP51858 RNU7-154P-201ENST00000516194 62 ntBASIC1.32□□□□□ -2.2
HDGFP51858 RNU4-54P-201ENST00000516428 129 ntBASIC1.32□□□□□ -2.2
HDGFP51858 U6.58-201ENST00000613107 107 ntBASIC1.32□□□□□ -2.2
HDGFP51858 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
HDGFP51858 RNU6-502P-201ENST00000362419 108 ntBASIC1.31□□□□□ -2.2
HDGFP51858 SNORD118-201ENST00000363593 134 ntBASIC1.31□□□□□ -2.2
HDGFP51858 SNORA2A-201ENST00000383885 135 ntBASIC1.31□□□□□ -2.2
HDGFP51858 MIRLET7B-201ENST00000385140 83 ntBASIC1.31□□□□□ -2.2
HDGFP51858 MIR579-201ENST00000385221 98 ntBASIC1.31□□□□□ -2.2
HDGFP51858 RNU6-782P-201ENST00000516852 104 ntBASIC1.31□□□□□ -2.2
HDGFP51858 RNU6-1036P-201ENST00000383959 104 ntBASIC1.3□□□□□ -2.2
HDGFP51858 MIR1285-1-201ENST00000408593 84 ntBASIC1.29□□□□□ -2.2
HDGFP51858 RNU6-598P-201ENST00000364017 105 ntBASIC1.28□□□□□ -2.2
HDGFP51858 MIR140-201ENST00000385282 100 ntBASIC1.28□□□□□ -2.2
HDGFP51858 SNORD2-201ENST00000459163 69 ntBASIC1.28□□□□□ -2.2
HDGFP51858 MIR4677-201ENST00000584153 80 ntBASIC1.28□□□□□ -2.2
HDGFP51858 RN7SL660P-201ENST00000614852 299 ntBASIC1.28□□□□□ -2.2
HDGFP51858 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.28□□□□□ -2.2
HDGFP51858 MIR501-201ENST00000390204 84 ntBASIC1.27□□□□□ -2.21
HDGFP51858 RNA5SP470-201ENST00000516463 106 ntBASIC1.27□□□□□ -2.21
HDGFP51858 MIR6755-201ENST00000619993 66 ntBASIC1.27□□□□□ -2.21
HDGFP51858 RNU6-924P-201ENST00000362926 108 ntBASIC1.26□□□□□ -2.21
HDGFP51858 MIR545-201ENST00000385085 106 ntBASIC1.26□□□□□ -2.21
HDGFP51858 RNU6-419P-201ENST00000517030 63 ntBASIC1.26□□□□□ -2.21
HDGFP51858 U2.18-201ENST00000622185 84 ntBASIC1.26□□□□□ -2.21
HDGFP51858 MIR4698-201ENST00000577795 80 ntBASIC1.25□□□□□ -2.21
HDGFP51858 AC084368.1-201ENST00000620935 65 ntBASIC1.24□□□□□ -2.21
HDGFP51858 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
HDGFP51858 RNU6-838P-201ENST00000363399 108 ntBASIC1.23□□□□□ -2.21
HDGFP51858 SNORA40.8-201ENST00000411034 126 ntBASIC1.23□□□□□ -2.21
HDGFP51858 RNU7-151P-201ENST00000516930 53 ntBASIC1.23□□□□□ -2.21
HDGFP51858 MIR4714-201ENST00000580728 77 ntBASIC1.22□□□□□ -2.21
HDGFP51858 AL353803.5-201ENST00000599815 141 ntBASIC1.22□□□□□ -2.21
HDGFP51858 MIR6513-201ENST00000621188 64 ntBASIC1.22□□□□□ -2.21
HDGFP51858 MIR3925-201ENST00000584674 77 ntBASIC1.21□□□□□ -2.22
HDGFP51858 U7.6-201ENST00000610841 64 ntBASIC1.21□□□□□ -2.22
HDGFP51858 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.2□□□□□ -2.22
HDGFP51858 RNU6-939P-201ENST00000384634 107 ntBASIC1.19□□□□□ -2.22
HDGFP51858 MIR608-201ENST00000384820 100 ntBASIC1.19□□□□□ -2.22
HDGFP51858 MIR518A1-201ENST00000385068 85 ntBASIC1.19□□□□□ -2.22
HDGFP51858 OR2A41P-201ENST00000473586 105 ntBASIC1.18□□□□□ -2.22
HDGFP51858 MIR499B-201ENST00000636498 73 ntBASIC1.18□□□□□ -2.22
HDGFP51858 MIR193B-201ENST00000384907 83 ntBASIC1.17□□□□□ -2.22
HDGFP51858 MIR760-201ENST00000390220 80 ntBASIC1.17□□□□□ -2.22
HDGFP51858 MIR429-201ENST00000362106 83 ntBASIC1.16□□□□□ -2.22
HDGFP51858 Y_RNA.698-201ENST00000516798 118 ntBASIC1.16□□□□□ -2.22
HDGFP51858 AC103810.9-201ENST00000606688 112 ntBASIC1.16□□□□□ -2.22
HDGFP51858 MIR6835-201ENST00000621552 64 ntBASIC1.16□□□□□ -2.22
HDGFP51858 RNU6-1262P-201ENST00000516217 96 ntBASIC1.15□□□□□ -2.23
HDGFP51858 AP000676.1-201ENST00000533307 52 ntBASIC1.15□□□□□ -2.23
HDGFP51858 MIR1273G-201ENST00000577677 100 ntBASIC1.15□□□□□ -2.23
HDGFP51858 MIR4661-201ENST00000582720 75 ntBASIC1.15□□□□□ -2.23
HDGFP51858 Y_RNA.69-201ENST00000362885 109 ntBASIC1.14□□□□□ -2.23
HDGFP51858 MIR936-201ENST00000401264 98 ntBASIC1.14□□□□□ -2.23
HDGFP51858 AL590095.2-201ENST00000604136 117 ntBASIC1.14□□□□□ -2.23
HDGFP51858 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
HDGFP51858 SNORD115-23-201ENST00000364461 82 ntBASIC1.13□□□□□ -2.23
HDGFP51858 RNU6-351P-201ENST00000516097 100 ntBASIC1.13□□□□□ -2.23
HDGFP51858 RNU6-1206P-201ENST00000516339 103 ntBASIC1.13□□□□□ -2.23
HDGFP51858 SNORD71-201ENST00000411292 86 ntBASIC1.12□□□□□ -2.23
HDGFP51858 AC098934.3-201ENST00000430450 190 ntBASIC1.12□□□□□ -2.23
HDGFP51858 Y_RNA.374-201ENST00000365606 101 ntBASIC1.11□□□□□ -2.23
HDGFP51858 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.11□□□□□ -2.23
HDGFP51858 MIR4432-201ENST00000581823 84 ntBASIC1.11□□□□□ -2.23
HDGFP51858 AC108676.2-201ENST00000605225 163 ntBASIC1.11□□□□□ -2.23
HDGFP51858 MIR6866-201ENST00000638146 69 ntBASIC1.11□□□□□ -2.23
HDGFP51858 AC010487.4-201ENST00000637027 61 ntBASIC1.1□□□□□ -2.23
HDGFP51858 SNORD114-23-201ENST00000363536 72 ntBASIC1.09□□□□□ -2.23
HDGFP51858 RNA5SP457-201ENST00000363657 124 ntBASIC1.09□□□□□ -2.23
HDGFP51858 SNORD114-2-201ENST00000363953 78 ntBASIC1.09□□□□□ -2.23
HDGFP51858 RNA5SP128-201ENST00000365305 116 ntBASIC1.09□□□□□ -2.23
HDGFP51858 MIR876-201ENST00000401147 81 ntBASIC1.09□□□□□ -2.23
HDGFP51858 RNU7-160P-201ENST00000516660 62 ntBASIC1.09□□□□□ -2.23
HDGFP51858 RNU6-986P-201ENST00000363133 102 ntBASIC1.08□□□□□ -2.24
HDGFP51858 RNU7-88P-201ENST00000458752 63 ntBASIC1.08□□□□□ -2.24
HDGFP51858 RNU6-848P-201ENST00000515948 107 ntBASIC1.08□□□□□ -2.24
HDGFP51858 RNU6-617P-201ENST00000516147 107 ntBASIC1.08□□□□□ -2.24
HDGFP51858 RNU6-473P-201ENST00000516164 107 ntBASIC1.08□□□□□ -2.24
HDGFP51858 RNU6-1049P-201ENST00000516414 107 ntBASIC1.08□□□□□ -2.24
HDGFP51858 U7.5-201ENST00000517224 61 ntBASIC1.08□□□□□ -2.24
HDGFP51858 RNU6-247P-201ENST00000362636 107 ntBASIC1.07□□□□□ -2.24
HDGFP51858 RNU6-974P-201ENST00000384099 108 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms