Protein–RNA interactions for Protein: P50479

PDLIM4, PDZ and LIM domain protein 4, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4P50479 SNORD45.1-201ENST00000363181 77 ntBASIC0.13□□□□□ -2.39
PDLIM4P50479 RNA5SP214-201ENST00000363378 118 ntBASIC0.13□□□□□ -2.39
PDLIM4P50479 SNORD115-22-201ENST00000364456 82 ntBASIC0.13□□□□□ -2.39
PDLIM4P50479 RNU6-1241P-201ENST00000384536 107 ntBASIC0.13□□□□□ -2.39
PDLIM4P50479 MIR329-2-201ENST00000385029 84 ntBASIC0.13□□□□□ -2.39
PDLIM4P50479 RNU7-165P-201ENST00000458864 60 ntBASIC0.13□□□□□ -2.39
PDLIM4P50479 RNA5SP476-201ENST00000516613 103 ntBASIC0.13□□□□□ -2.39
PDLIM4P50479 MIR6718-201ENST00000616153 80 ntBASIC0.13□□□□□ -2.39
PDLIM4P50479 RNU6-1162P-201ENST00000384443 104 ntBASIC0.12□□□□□ -2.39
PDLIM4P50479 Y_RNA.545-201ENST00000384652 105 ntBASIC0.12□□□□□ -2.39
PDLIM4P50479 AC104408.1-201ENST00000605241 170 ntBASIC0.12□□□□□ -2.39
PDLIM4P50479 MIR664A-201ENST00000626086 82 ntBASIC0.12□□□□□ -2.39
PDLIM4P50479 RNU6-604P-201ENST00000390917 100 ntBASIC0.11□□□□□ -2.39
PDLIM4P50479 MIR4768-201ENST00000585270 74 ntBASIC0.11□□□□□ -2.39
PDLIM4P50479 MIR6086-201ENST00000638065 55 ntBASIC0.11□□□□□ -2.39
PDLIM4P50479 RNA5SP98-201ENST00000363158 137 ntBASIC0.1□□□□□ -2.39
PDLIM4P50479 MIR1265-201ENST00000408444 86 ntBASIC0.1□□□□□ -2.39
PDLIM4P50479 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.1□□□□□ -2.39
PDLIM4P50479 RNU6-634P-201ENST00000459134 106 ntBASIC0.1□□□□□ -2.39
PDLIM4P50479 RNU6-656P-201ENST00000516785 107 ntBASIC0.1□□□□□ -2.39
PDLIM4P50479 RNU6-1015P-201ENST00000517121 99 ntBASIC0.1□□□□□ -2.39
PDLIM4P50479 MIR5190-201ENST00000581537 80 ntBASIC0.1□□□□□ -2.39
PDLIM4P50479 SNORD115-25-201ENST00000362619 82 ntBASIC0.09□□□□□ -2.4
PDLIM4P50479 RNU6-1296P-201ENST00000383879 107 ntBASIC0.09□□□□□ -2.4
PDLIM4P50479 RNU6-1036P-201ENST00000383959 104 ntBASIC0.09□□□□□ -2.4
PDLIM4P50479 MIR145-201ENST00000384967 88 ntBASIC0.09□□□□□ -2.4
PDLIM4P50479 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
PDLIM4P50479 HAR1A.1-201ENST00000459583 118 ntBASIC0.09□□□□□ -2.4
PDLIM4P50479 RNA5SP147-201ENST00000516493 109 ntBASIC0.09□□□□□ -2.4
PDLIM4P50479 MIR4290-201ENST00000583807 95 ntBASIC0.09□□□□□ -2.4
PDLIM4P50479 MIR371B-201ENST00000638082 66 ntBASIC0.09□□□□□ -2.4
PDLIM4P50479 MIR6759-201ENST00000638110 65 ntBASIC0.09□□□□□ -2.4
PDLIM4P50479 RNU6-502P-201ENST00000362419 108 ntBASIC0.08□□□□□ -2.4
PDLIM4P50479 SNORD113.1-201ENST00000363280 73 ntBASIC0.08□□□□□ -2.4
PDLIM4P50479 Y_RNA.185-201ENST00000363894 100 ntBASIC0.08□□□□□ -2.4
PDLIM4P50479 RNU6-645P-201ENST00000364649 106 ntBASIC0.08□□□□□ -2.4
PDLIM4P50479 MIR593-201ENST00000384856 100 ntBASIC0.08□□□□□ -2.4
PDLIM4P50479 MIR154-201ENST00000385243 84 ntBASIC0.08□□□□□ -2.4
PDLIM4P50479 RNA5SP163-201ENST00000410304 99 ntBASIC0.08□□□□□ -2.4
PDLIM4P50479 MIR6514-201ENST00000622549 70 ntBASIC0.08□□□□□ -2.4
PDLIM4P50479 RNU6-337P-201ENST00000391243 106 ntBASIC0.07□□□□□ -2.4
PDLIM4P50479 snoU13.13-201ENST00000458842 104 ntBASIC0.07□□□□□ -2.4
PDLIM4P50479 RNU6-871P-201ENST00000516122 100 ntBASIC0.07□□□□□ -2.4
PDLIM4P50479 MIR4636-201ENST00000582271 80 ntBASIC0.07□□□□□ -2.4
PDLIM4P50479 MIR6773-201ENST00000612812 74 ntBASIC0.07□□□□□ -2.4
PDLIM4P50479 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.07□□□□□ -2.4
PDLIM4P50479 SNORA33.1-201ENST00000364957 130 ntBASIC0.06□□□□□ -2.4
PDLIM4P50479 RNU6-46P-201ENST00000383860 107 ntBASIC0.06□□□□□ -2.4
PDLIM4P50479 RNU7-159P-201ENST00000459284 62 ntBASIC0.06□□□□□ -2.4
PDLIM4P50479 AC104692.1-201ENST00000472406 90 ntBASIC0.06□□□□□ -2.4
PDLIM4P50479 RNU6-302P-201ENST00000365249 107 ntBASIC0.05□□□□□ -2.4
PDLIM4P50479 SNORD115-31-201ENST00000365318 82 ntBASIC0.05□□□□□ -2.4
PDLIM4P50479 RNU6-881P-201ENST00000516813 102 ntBASIC0.05□□□□□ -2.4
PDLIM4P50479 MIR5589-201ENST00000579442 60 ntBASIC0.05□□□□□ -2.4
PDLIM4P50479 MIR4802-201ENST00000581881 80 ntBASIC0.05□□□□□ -2.4
PDLIM4P50479 MIR6507-201ENST00000613630 70 ntBASIC0.05□□□□□ -2.4
PDLIM4P50479 U6.96-201ENST00000636425 70 ntBASIC0.05□□□□□ -2.4
PDLIM4P50479 RNU6-1216P-201ENST00000362590 107 ntBASIC0.04□□□□□ -2.4
PDLIM4P50479 SNORD114-5-201ENST00000362928 70 ntBASIC0.04□□□□□ -2.4
PDLIM4P50479 SNORD114-16-201ENST00000363044 70 ntBASIC0.04□□□□□ -2.4
PDLIM4P50479 SNORD45A-201ENST00000384512 84 ntBASIC0.04□□□□□ -2.4
PDLIM4P50479 MTND4LP1-201ENST00000446263 157 ntBASIC0.04□□□□□ -2.4
PDLIM4P50479 RNU6-982P-201ENST00000516216 102 ntBASIC0.04□□□□□ -2.4
PDLIM4P50479 MIR1295B-201ENST00000636144 60 ntBASIC0.04□□□□□ -2.4
PDLIM4P50479 RNU6-900P-201ENST00000384498 102 ntBASIC0.03□□□□□ -2.4
PDLIM4P50479 RNU6-30P-201ENST00000384561 107 ntBASIC0.03□□□□□ -2.4
PDLIM4P50479 RNU6-540P-201ENST00000384622 101 ntBASIC0.03□□□□□ -2.4
PDLIM4P50479 MIRLET7B-201ENST00000385140 83 ntBASIC0.03□□□□□ -2.4
PDLIM4P50479 RNU7-55P-201ENST00000459426 62 ntBASIC0.03□□□□□ -2.4
PDLIM4P50479 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.03□□□□□ -2.41
PDLIM4P50479 SNORD116-24-201ENST00000384549 92 ntBASIC0.02□□□□□ -2.41
PDLIM4P50479 CYP3A54P-201ENST00000566950 75 ntBASIC0.02□□□□□ -2.41
PDLIM4P50479 MIR655-201ENST00000362159 97 ntBASIC0.01□□□□□ -2.41
PDLIM4P50479 SNORD114-31-201ENST00000363219 75 ntBASIC0.01□□□□□ -2.41
PDLIM4P50479 RNA5SP215-201ENST00000363440 122 ntBASIC0.01□□□□□ -2.41
PDLIM4P50479 RNA5SP368-201ENST00000364298 116 ntBASIC0.01□□□□□ -2.41
PDLIM4P50479 Y_RNA.565-201ENST00000384719 101 ntBASIC0.01□□□□□ -2.41
PDLIM4P50479 MIR889-201ENST00000401280 79 ntBASIC0.01□□□□□ -2.41
PDLIM4P50479 RNA5SP470-201ENST00000516463 106 ntBASIC0.01□□□□□ -2.41
PDLIM4P50479 SNORD115-23-201ENST00000364461 82 ntBASIC0□□□□□ -2.41
PDLIM4P50479 RNU6-895P-201ENST00000384125 103 ntBASIC0□□□□□ -2.41
PDLIM4P50479 RNU6-1089P-201ENST00000516473 104 ntBASIC0□□□□□ -2.41
PDLIM4P50479 U2.7-201ENST00000619197 100 ntBASIC0□□□□□ -2.41
PDLIM4P50479 AC090617.8-201ENST00000623339 167 ntBASIC0□□□□□ -2.41
PDLIM4P50479 RNU6-668P-201ENST00000364180 107 ntBASIC-0.01□□□□□ -2.41
PDLIM4P50479 MIR9-2-201ENST00000384838 87 ntBASIC-0.01□□□□□ -2.41
PDLIM4P50479 AP000676.1-201ENST00000533307 52 ntBASIC-0.01□□□□□ -2.41
PDLIM4P50479 AC244250.2-201ENST00000418731 148 ntBASIC-0.02□□□□□ -2.41
PDLIM4P50479 AL021921.1-201ENST00000442774 93 ntBASIC-0.02□□□□□ -2.41
PDLIM4P50479 snoU13.19-201ENST00000459148 104 ntBASIC-0.02□□□□□ -2.41
PDLIM4P50479 IGLVI-20-201ENST00000519296 130 ntBASIC-0.02□□□□□ -2.41
PDLIM4P50479 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
PDLIM4P50479 SNORA18.1-201ENST00000363418 128 ntBASIC-0.03□□□□□ -2.41
PDLIM4P50479 RNU6-973P-201ENST00000364690 107 ntBASIC-0.03□□□□□ -2.41
PDLIM4P50479 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.03□□□□□ -2.41
PDLIM4P50479 Z95118.1-201ENST00000421372 247 ntBASIC-0.03□□□□□ -2.41
PDLIM4P50479 RNU6-539P-201ENST00000516665 103 ntBASIC-0.03□□□□□ -2.41
PDLIM4P50479 RNU6-929P-201ENST00000384429 107 ntBASIC-0.04□□□□□ -2.42
PDLIM4P50479 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
PDLIM4P50479 RNU6-663P-201ENST00000391105 106 ntBASIC-0.04□□□□□ -2.42
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