Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 AC090617.8-201ENST00000623339 167 ntBASIC0.41□□□□□ -2.34
THBS3P49746 SNORA49-201ENST00000386157 136 ntBASIC0.4□□□□□ -2.35
THBS3P49746 RNA5SP299-201ENST00000391203 116 ntBASIC0.4□□□□□ -2.35
THBS3P49746 SCARNA21.1-201ENST00000515996 128 ntBASIC0.4□□□□□ -2.35
THBS3P49746 MIR548V-201ENST00000584165 80 ntBASIC0.4□□□□□ -2.35
THBS3P49746 U2.7-201ENST00000619197 100 ntBASIC0.4□□□□□ -2.35
THBS3P49746 AC084368.1-201ENST00000620935 65 ntBASIC0.4□□□□□ -2.35
THBS3P49746 RNU6-863P-201ENST00000515989 104 ntBASIC0.39□□□□□ -2.35
THBS3P49746 RN7SL660P-201ENST00000614852 299 ntBASIC0.39□□□□□ -2.35
THBS3P49746 U6.96-201ENST00000636425 70 ntBASIC0.39□□□□□ -2.35
THBS3P49746 MIRLET7D-201ENST00000362263 87 ntBASIC0.38□□□□□ -2.35
THBS3P49746 RNA5SP457-201ENST00000363657 124 ntBASIC0.38□□□□□ -2.35
THBS3P49746 SNORA25.5-201ENST00000363782 126 ntBASIC0.38□□□□□ -2.35
THBS3P49746 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
THBS3P49746 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
THBS3P49746 RNU7-174P-201ENST00000516248 59 ntBASIC0.38□□□□□ -2.35
THBS3P49746 AC243829.6-201ENST00000612652 106 ntBASIC0.38□□□□□ -2.35
THBS3P49746 MIR8087-201ENST00000612745 78 ntBASIC0.38□□□□□ -2.35
THBS3P49746 RNU6-302P-201ENST00000365249 107 ntBASIC0.37□□□□□ -2.35
THBS3P49746 RNU6-1036P-201ENST00000383959 104 ntBASIC0.37□□□□□ -2.35
THBS3P49746 MIR1197-201ENST00000408818 88 ntBASIC0.37□□□□□ -2.35
THBS3P49746 SNORD2-201ENST00000459163 69 ntBASIC0.37□□□□□ -2.35
THBS3P49746 RNA5SP330-201ENST00000517096 96 ntBASIC0.37□□□□□ -2.35
THBS3P49746 CYP3A54P-201ENST00000566950 75 ntBASIC0.37□□□□□ -2.35
THBS3P49746 RNU6-698P-201ENST00000363523 107 ntBASIC0.36□□□□□ -2.35
THBS3P49746 RNU6-34P-201ENST00000364874 107 ntBASIC0.36□□□□□ -2.35
THBS3P49746 RNU6-815P-201ENST00000384080 113 ntBASIC0.36□□□□□ -2.35
THBS3P49746 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
THBS3P49746 MIR630-201ENST00000384957 97 ntBASIC0.36□□□□□ -2.35
THBS3P49746 MIR517B-201ENST00000385102 67 ntBASIC0.36□□□□□ -2.35
THBS3P49746 MIR876-201ENST00000401147 81 ntBASIC0.36□□□□□ -2.35
THBS3P49746 SNORA9.1-201ENST00000362412 131 ntBASIC0.35□□□□□ -2.35
THBS3P49746 RNA5SP192-201ENST00000364404 120 ntBASIC0.35□□□□□ -2.35
THBS3P49746 RNU6-337P-201ENST00000391243 106 ntBASIC0.35□□□□□ -2.35
THBS3P49746 SCARNA11.2-201ENST00000517183 154 ntBASIC0.35□□□□□ -2.35
THBS3P49746 RNU6-92P-201ENST00000605893 104 ntBASIC0.35□□□□□ -2.35
THBS3P49746 U4.4-201ENST00000620626 117 ntBASIC0.35□□□□□ -2.35
THBS3P49746 RNU6-940P-201ENST00000363433 104 ntBASIC0.34□□□□□ -2.36
THBS3P49746 RNU6-499P-201ENST00000365615 107 ntBASIC0.34□□□□□ -2.36
THBS3P49746 RNU6-127P-201ENST00000390897 107 ntBASIC0.34□□□□□ -2.36
THBS3P49746 MIR6773-201ENST00000612812 74 ntBASIC0.34□□□□□ -2.36
THBS3P49746 Y_RNA.68-201ENST00000362881 102 ntBASIC0.33□□□□□ -2.36
THBS3P49746 RNA5SP62-201ENST00000363457 110 ntBASIC0.33□□□□□ -2.36
THBS3P49746 Y_RNA.178-201ENST00000363832 102 ntBASIC0.33□□□□□ -2.36
THBS3P49746 VTRNA1-3-201ENST00000365645 89 ntBASIC0.33□□□□□ -2.36
THBS3P49746 SNORD113-2-201ENST00000391082 72 ntBASIC0.33□□□□□ -2.36
THBS3P49746 SNORA75.1-201ENST00000391130 148 ntBASIC0.33□□□□□ -2.36
THBS3P49746 MIR643-201ENST00000385267 97 ntBASIC0.32□□□□□ -2.36
THBS3P49746 MIR1255B2-201ENST00000408618 67 ntBASIC0.32□□□□□ -2.36
THBS3P49746 AL021921.1-201ENST00000442774 93 ntBASIC0.32□□□□□ -2.36
THBS3P49746 SNORA62.5-201ENST00000516634 120 ntBASIC0.32□□□□□ -2.36
THBS3P49746 RNU6-122P-201ENST00000516818 107 ntBASIC0.32□□□□□ -2.36
THBS3P49746 MIR466-201ENST00000580653 84 ntBASIC0.32□□□□□ -2.36
THBS3P49746 RNU6-502P-201ENST00000362419 108 ntBASIC0.31□□□□□ -2.36
THBS3P49746 SNORD60.1-201ENST00000362451 73 ntBASIC0.31□□□□□ -2.36
THBS3P49746 Y_RNA.246-201ENST00000364495 108 ntBASIC0.31□□□□□ -2.36
THBS3P49746 MIR106A-201ENST00000384870 81 ntBASIC0.31□□□□□ -2.36
THBS3P49746 RNU6-518P-201ENST00000516056 96 ntBASIC0.31□□□□□ -2.36
THBS3P49746 AC069113.3-201ENST00000521019 150 ntBASIC0.31□□□□□ -2.36
THBS3P49746 MIR330-201ENST00000362196 94 ntBASIC0.3□□□□□ -2.36
THBS3P49746 SNORD115-25-201ENST00000362619 82 ntBASIC0.3□□□□□ -2.36
THBS3P49746 RNA5SP257-201ENST00000363023 116 ntBASIC0.3□□□□□ -2.36
THBS3P49746 Y_RNA.325-201ENST00000365171 122 ntBASIC0.3□□□□□ -2.36
THBS3P49746 MIR633-201ENST00000384821 98 ntBASIC0.3□□□□□ -2.36
THBS3P49746 MIR519A2-201ENST00000384990 87 ntBASIC0.3□□□□□ -2.36
THBS3P49746 MIRLET7B-201ENST00000385140 83 ntBASIC0.3□□□□□ -2.36
THBS3P49746 RNU6-1246P-201ENST00000391064 107 ntBASIC0.3□□□□□ -2.36
THBS3P49746 RNU6-782P-201ENST00000516852 104 ntBASIC0.3□□□□□ -2.36
THBS3P49746 MIR4514-201ENST00000581410 57 ntBASIC0.3□□□□□ -2.36
THBS3P49746 AC079150.2-201ENST00000443733 78 ntBASIC0.29□□□□□ -2.36
THBS3P49746 AP000676.1-201ENST00000533307 52 ntBASIC0.29□□□□□ -2.36
THBS3P49746 RNU6-1079P-201ENST00000362861 110 ntBASIC0.28□□□□□ -2.36
THBS3P49746 Y_RNA.74-201ENST00000362911 99 ntBASIC0.28□□□□□ -2.36
THBS3P49746 MIR548H2-201ENST00000408874 88 ntBASIC0.28□□□□□ -2.36
THBS3P49746 AC108740.1-201ENST00000498629 225 ntBASIC0.28□□□□□ -2.36
THBS3P49746 MIR3938-201ENST00000582157 103 ntBASIC0.28□□□□□ -2.36
THBS3P49746 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
THBS3P49746 RNU6-829P-201ENST00000363700 112 ntBASIC0.27□□□□□ -2.37
THBS3P49746 SNORA41B-201ENST00000384785 128 ntBASIC0.27□□□□□ -2.37
THBS3P49746 RNU7-154P-201ENST00000516194 62 ntBASIC0.27□□□□□ -2.37
THBS3P49746 RNA5SP470-201ENST00000516463 106 ntBASIC0.27□□□□□ -2.37
THBS3P49746 MIR6514-201ENST00000622549 70 ntBASIC0.27□□□□□ -2.37
THBS3P49746 RNU6-1327P-201ENST00000365302 105 ntBASIC0.26□□□□□ -2.37
THBS3P49746 MTND4LP19-201ENST00000403051 166 ntBASIC0.26□□□□□ -2.37
THBS3P49746 MIR548AG1-201ENST00000579932 66 ntBASIC0.26□□□□□ -2.37
THBS3P49746 AC090625.1-201ENST00000357130 210 ntBASIC0.25□□□□□ -2.37
THBS3P49746 RNU6-446P-201ENST00000362827 106 ntBASIC0.25□□□□□ -2.37
THBS3P49746 RNA5SP98-201ENST00000363158 137 ntBASIC0.25□□□□□ -2.37
THBS3P49746 Y_RNA.282-201ENST00000364793 102 ntBASIC0.25□□□□□ -2.37
THBS3P49746 RNA5SP163-201ENST00000410304 99 ntBASIC0.25□□□□□ -2.37
THBS3P49746 SNORD115-23-201ENST00000364461 82 ntBASIC0.24□□□□□ -2.37
THBS3P49746 SNORD116-16-201ENST00000384533 92 ntBASIC0.24□□□□□ -2.37
THBS3P49746 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.24□□□□□ -2.37
THBS3P49746 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
THBS3P49746 Y_RNA.433-201ENST00000384089 102 ntBASIC0.23□□□□□ -2.37
THBS3P49746 MIR4315-1-201ENST00000636800 73 ntBASIC0.23□□□□□ -2.37
THBS3P49746 MIR4315-2-201ENST00000640925 73 ntBASIC0.23□□□□□ -2.37
THBS3P49746 Y_RNA.236-201ENST00000364427 111 ntBASIC0.22□□□□□ -2.37
THBS3P49746 MIR593-201ENST00000384856 100 ntBASIC0.22□□□□□ -2.37
THBS3P49746 MIR527-201ENST00000385244 85 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 268.3 ms